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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4841041..4844133+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009202-T1 ID=KJC3_009202-T1|Name=KJC3_009202-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3093bp|location=Sequence derived from alignment at ch6:4841041..4844133+ (Aspergillus niger KJC3)
CAGCTCTTCGGCGAGAACGGTTGCGCTTCGATCGCATTCTTTCAGACCGG
CTCTTACTATCATGGATTTGCAACCACCGTCGGTGCTGGCTCATTTGCCG
CGCCCGTTGCATGCGTCTACCGGTAAAACCCACTTGGGCGAAGTGCATAG
CTTGGCCGACTCGAAAAAGCGCAAGAGACATGAAGTGGTCGTTGCGGTCG
ATGGGGAGGCCGTGAATATCTACAACGTATGCATGGACTCCACGGATACA
GCATTGGCAGGGATTTTACAGGCTGACTCGCCGAATCTCTTTAGATCCAA
ACACCCAAATTGGTGACCTCCTACGCCGTCCCACCTCAATCCGCGTTCTC
CTGCCAGCCATGCTCGGTGCGCAGAAAGATCAACAAGTCTCTTGTCAGGA
GGCAGACCTACGTCGCCGTAAAACAGCAGATCAAGTCATTTGTGGAGGAG
AATGGCGGTAACGGTTCTAGTGCGCCTTCCATCGGTTCTTCGTCTTATTC
AGTGACCGATTCGGAAAGTCCTGCGGTTTTCGTTGGAATTGTTCCAACCG
AGTCTAAGAAGGAGGAAGAGGAAGGATCGTTCGATGTTCTGGCTGTTCAT
CAAGACGGACGTGTCCGGCGCCTGTCTTCGGACCTCAATACCCAGCATTG
GAGCTTGCGGCACAGCGAGGTCGCTAAATCCAGCACAACCCATGAGATTC
GCTCGTGTTTCCTCGTCGAATTCGAAGATGCGAAGAAGTCCTTGTTCAAG
CGCAGACAGGATTTGGCCGCCCTAGCCTTCGGAAACCTTACAGAGACTGG
TGTCGACGAACCTTCGGTGCTGTTACTTGTTTCGCAACCCATTGGCTCTC
AGCACACGAAACTGAGCGACGTCAAGGTCCAAATGTTCTCCGTTCCAGCC
AATGCCTCCTCTTCGGGCCACGACGAAAGCCAAAAGATGCGCCACCTGAT
CACATTCAACCTGCCCGACGTCGATGGGCCTGAGACGATCGAGACCCGTG
GCTCACAGTGGTACTTCCATGCCGGATCAGCTGGCCTGAACGTTTCCTTC
GGACAAGGATACATCAACTTCGATCTTTCCCAGTACACTCCCACAATGAC
CTCTAAGTTCATACTTGAGAACGAGGAATTTTCATCCCTTATGCGTATCT
CGCCTCAGTCCGTGATCGGAGCCGGCAAGTCCATGATCGCAGTTTACGAC
ACGCAATACAAATCCGTGCAGCGCAGCATTGCTGTCAGCGACATCCCAGC
CAGTGCCTCCGGCATCAAGGCGCGCACAACGTTCGTTAGTTACTACGCCA
AGTTGGGAGTTGCCATTGCTACCAAGGACAACACTCTGCTCGCTTTCGAC
TTGAGCCCGTCGCACAACGCTGCCAATCCCTCCCTTAAACGGTCCAGGGA
TGGCTTGCTGATTGACGCTATCGGCCGGGGTATCGGATCCGCCAAGAAGC
ATCGCACCGAGGATGCAGCAATTCTGGGTCTCTCATCGCCCGAACAAGTC
GAGCGCTGGAACAAGCTGACTGCTGACCTCCGTCAGTGTGCCGAGGCCAA
GGACGCCGATGGTTTCGACCGTGCAGTACTGGCTTACTTCGGTGCTAACG
GCTTCCCTTCACCAGACGACTACGTCAACCCGGAGACAACAGTCCATCTT
TTGTCTTTGATATTCAAGCTGAAAGACGATGCCTCAAGCCAGGACCAACT
GTCAGCCGCGTCTTCCTTCCGCTTGTCCATCAATCTGTGGCCCCAGCAAA
CCTGCCAATGGCTCATCCAGATCGGTCACCTGTCCCCGAACAACGTCGAG
ATCGCTCTCCGCCGCTCCTTCAAACCCCGTATCCTTCCCTCCCTCCCCAC
CGGATCTTTCATCCAAGCCCTGACCGACCTGGATCCATCTCTCCAACGCC
TCATCGACGTCCTCCAAGGCCGCGTCCTCTTCTCCACCGACGAGCTCGCT
TACATCCTCAAGCTCCTCATCAACACTGCTCGTTCCCGCTCCGTCACCCT
AGACGAGGAAGCCCCCAAGGCGCTCACCAACGGCGAAGACCAAGACCAGA
CCCCCACCCAGGCCCTCTCCCACGCCGAACCCAGCCTCGGAAACATTTTC
CTCGCCCTCAACACCACCCTCGAAAAGATCCACCGCCACCCCCTCCCCGC
CATCACCACATCCATCCGCTCCGCCCTATCCCGCACCGAGATCATCTCCA
TGGTGCACCATCTCCGCCTCTCCCTCGCAACAGGAGGCTACACCTCCCGC
TTCACCGAATCCCCTCCCATCCCCGTCCCCGCCGAGCAAACCCAACCCCC
GGTCTCCCTCTCCACAATCGTCGGCCTCCTTAACGCCTCCGTGGACGCCA
TCGGCCCCTCCGGCTGGATCTCTGCCGCCTCGGGCGTCGACGACTCCATC
ACAGCCCGTGACCAGGAACTCATCGCCGACCTGAAGTCCGAAATCTCCGC
TGCCCTCGCCGGCATCGAAGAGGCCACTTACCTCAAGGGCATTCTCCACG
AATATCTCCGCTATGCTAACAGCGCTATCCGCTCCGCCACCACCACCGTC
GCCGTCGACTCCGGTAGCGATACCCCTGCCTCTGCTATGGTGCGGCTCGA
GAAGCTCAACGGCGCGGACCTGATGGTCTTCGGCGCCACGGAGGACGATG
ATGGTCTTGAGGGTGACGCTAGCGGCAAGCTATTGCCGTTGTCGCTCAAG
GCGGGATCAAATGATGTCAGCAAGACTAAGGTCAAGTTGTCGACCGGTGA
GGTCAAGACGAGAAGTAGCAGAGAGATTGGTTATCTGCGGCGGAAAGCGG
CGGGCAAGTACTCCTTCGAGAGACTTATTGTATAGATTCAGTACTAGTAT
TTCTTTTATGGTACATCATGGTGTATGGTACAAAAGTAGAACGGATCATT
TCCAAGATTTATATATTTCTTTTTCCATTGAGTCATATTTTGAATATGTG
CCATTGTTGGGGCAAAATGATTGGTTGGTAGTTATTGTGTTGAACTCATA
CTAGGGCGCTGATCGGGGTGATCAATGGGCCTTCCGCCCTCCCTATAGCG
CGATTTAGCTGCATTTTGGATTTCCAAGCAGGAAGGCTTCGGT back to topCoding sequence (CDS) from alignment at ch6:4841041..4844133+ >KJC3_009202-T1 ID=KJC3_009202-T1|Name=KJC3_009202-T1|organism=Aspergillus niger KJC3|type=CDS|length=5412bp|location=Sequence derived from alignment at ch6:4841041..4844133+ (Aspergillus niger KJC3)
ATGGATTTGCAACCACCGTCGGTGCTGGCTCATTTGCCGCGCCCGTTGCA
TGCGTCTACCGGTAAAACCCACTTGGGCGAAGTGCATAGCTTGGCCGACT
CGAAAAAGCGCAAGAGACATGAAGTGGTCGTTGCGGTCGATGGGGAGGCC
GTGAATATCTACAACATCCAAACACCCAAATTGGTGACCTCCTACGCCGT
CCCACCTCAATCCGCGTTCTCCTGCCAGCCATGCTCGGTGCGCAGAAAGA
TCAACAAGTCTCTTGTCAGGAGGCAGACCTACGTCGCCGTAAAACAGCAG
ATCAAGTCATTTGTGGAGGAGAATGGCGGTAACGGTTCTAGTGCGCCTTC
CATCGGTTCTTCGTCTTATTCAGTGACCGATTCGGAAAGTCCTGCGGTTT
TCGTTGGAATTGTTCCAACCGAGTCTAAGAAGGAGGAAGAGGAAGGATCG
TTCGATGTTCTGGCTGTTCATCAAGACGGACGTGTCCGGCGCCTGTCTTC
GGACCTCAATACCCAGCATTGGAGCTTGCGGCACAGCGAGGTCGCTAAAT
CCAGCACAACCCATGAGATTCGCTCGTGTTTCCTCGTCGAATTCGAAGAT
GCGAAGAAGTCCTTGTTCAAGCGCAGACAGGATTTGGCCGCCCTAGCCTT
CGGAAACCTTACAGAGACTGGTGTCGACGAACCTTCGGTGCTGTTACTTG
TTTCGCAACCCATTGGCTCTCAGCACACGAAACTGAGCGACGTCAAGGTC
CAAATGTTCTCCGTTCCAGCCAATGCCTCCTCTTCGGGCCACGACGAAAG
CCAAAAGATGCGCCACCTGATCACATTCAACCTGCCCGACGTCGATGGGC
CTGAGACGATCGAGACCCGTGGCTCACAGTGGTACTTCCATGCCGGATCA
GCTGGCCTGAACGTTTCCTTCGGACAAGGATACATCAACTTCGATCTTTC
CCAGTACACTCCCACAATGACCTCTAAGTTCATACTTGAGAACGAGGAAT
TTTCATCCCTTATGCGTATCTCGCCTCAGTCCGTGATCGGAGCCGGCAAG
TCCATGATCGCAGTTTACGACACGCAATACAAATCCGTGCAGCGCAGCAT
TGCTGTCAGCGACATCCCAGCCAGTGCCTCCGGCATCAAGGCGCGCACAA
CGTTCGTTAGTTACTACGCCAAGTTGGGAGTTGCCATTGCTACCAAGGAC
AACACTCTGCTCGCTTTCGACTTGAGCCCGTCGCACAACGCTGCCAATCC
CTCCCTTAAACGGTCCAGGGATGGCTTGCTGATTGACGCTATCGGCCGGG
GTATCGGATCCGCCAAGAAGCATCGCACCGAGGATGCAGCAATTCTGGGT
CTCTCATCGCCCGAACAAGTCGAGCGCTGGAACAAGCTGACTGCTGACCT
CCGTCAGTGTGCCGAGGCCAAGGACGCCGATGGTTTCGACCGTGCAGTAC
TGGCTTACTTCGGTGCTAACGGCTTCCCTTCACCAGACGACTACGTCAAC
CCGGAGACAACAGTCCATCTTTTGTCTTTGATATTCAAGCTGAAAGACGA
TGCCTCAAGCCAGGACCAACTGTCAGCCGCGTCTTCCTTCCGCTTGTCCA
TCAATCTGTGGCCCCAGCAAACCTGCCAATGGCTCATCCAGATCGGTCAC
CTGTCCCCGAACAACGTCGAGATCGCTCTCCGCCGCTCCTTCAAACCCCG
TATCCTTCCCTCCCTCCCCACCGGATCTTTCATCCAAGCCCTGACCGACC
TGGATCCATCTCTCCAACGCCTCATCGACGTCCTCCAAGGCCGCGTCCTC
TTCTCCACCGACGAGCTCGCTTACATCCTCAAGCTCCTCATCAACACTGC
TCGTTCCCGCTCCGTCACCCTAGACGAGGAAGCCCCCAAGGCGCTCACCA
ACGGCGAAGACCAAGACCAGACCCCCACCCAGGCCCTCTCCCACGCCGAA
CCCAGCCTCGGAAACATTTTCCTCGCCCTCAACACCACCCTCGAAAAGAT
CCACCGCCACCCCCTCCCCGCCATCACCACATCCATCCGCTCCGCCCTAT
CCCGCACCGAGATCATCTCCATGGTGCACCATCTCCGCCTCTCCCTCGCA
ACAGGAGGCTACACCTCCCGCTTCACCGAATCCCCTCCCATCCCCGTCCC
CGCCGAGCAAACCCAACCCCCGGTCTCCCTCTCCACAATCGTCGGCCTCC
TTAACGCCTCCGTGGACGCCATCGGCCCCTCCGGCTGGATCTCTGCCGCC
TCGGGCGTCGACGACTCCATCACAGCCCGTGACCAGGAACTCATCGCCGA
CCTGAAGTCCGAAATCTCCGCTGCCCTCGCCGGCATCGAAGAGGCCACTT
ACCTCAAGGGCATTCTCCACGAATATCTCCGCTATGCTAACAGCGCTATC
CGCTCCGCCACCACCACCGTCGCCGTCGACTCCGGTAGCGATACCCCTGC
CTCTGCTATGGTGCGGCTCGAGAAGCTCAACGGCGCGGACCTGATGGTCT
TCGGCGCCACGGAGGACGATGATGGTCTTGAGGGTGACGCTAGCGGCAAG
CTATTGCCGTTGTCGCTCAAGGCGGGATCAAATGATGTCAGCAAGACTAA
GGTCAAGTTGTCGACCGGTGAGGTCAAGACGAGAAGTAGCAGAGAGATTG
GTTATCTGCGGCGGAAAGCGGCGGGCAAGTACTCCTTCGAGAGACTTATT
GTATAGATGGATTTGCAACCACCGTCGGTGCTGGCTCATTTGCCGCGCCC
GTTGCATGCGTCTACCGGTAAAACCCACTTGGGCGAAGTGCATAGCTTGG
CCGACTCGAAAAAGCGCAAGAGACATGAAGTGGTCGTTGCGGTCGATGGG
GAGGCCGTGAATATCTACAACATCCAAACACCCAAATTGGTGACCTCCTA
CGCCGTCCCACCTCAATCCGCGTTCTCCTGCCAGCCATGCTCGGTGCGCA
GAAAGATCAACAAGTCTCTTGTCAGGAGGCAGACCTACGTCGCCGTAAAA
CAGCAGATCAAGTCATTTGTGGAGGAGAATGGCGGTAACGGTTCTAGTGC
GCCTTCCATCGGTTCTTCGTCTTATTCAGTGACCGATTCGGAAAGTCCTG
CGGTTTTCGTTGGAATTGTTCCAACCGAGTCTAAGAAGGAGGAAGAGGAA
GGATCGTTCGATGTTCTGGCTGTTCATCAAGACGGACGTGTCCGGCGCCT
GTCTTCGGACCTCAATACCCAGCATTGGAGCTTGCGGCACAGCGAGGTCG
CTAAATCCAGCACAACCCATGAGATTCGCTCGTGTTTCCTCGTCGAATTC
GAAGATGCGAAGAAGTCCTTGTTCAAGCGCAGACAGGATTTGGCCGCCCT
AGCCTTCGGAAACCTTACAGAGACTGGTGTCGACGAACCTTCGGTGCTGT
TACTTGTTTCGCAACCCATTGGCTCTCAGCACACGAAACTGAGCGACGTC
AAGGTCCAAATGTTCTCCGTTCCAGCCAATGCCTCCTCTTCGGGCCACGA
CGAAAGCCAAAAGATGCGCCACCTGATCACATTCAACCTGCCCGACGTCG
ATGGGCCTGAGACGATCGAGACCCGTGGCTCACAGTGGTACTTCCATGCC
GGATCAGCTGGCCTGAACGTTTCCTTCGGACAAGGATACATCAACTTCGA
TCTTTCCCAGTACACTCCCACAATGACCTCTAAGTTCATACTTGAGAACG
AGGAATTTTCATCCCTTATGCGTATCTCGCCTCAGTCCGTGATCGGAGCC
GGCAAGTCCATGATCGCAGTTTACGACACGCAATACAAATCCGTGCAGCG
CAGCATTGCTGTCAGCGACATCCCAGCCAGTGCCTCCGGCATCAAGGCGC
GCACAACGTTCGTTAGTTACTACGCCAAGTTGGGAGTTGCCATTGCTACC
AAGGACAACACTCTGCTCGCTTTCGACTTGAGCCCGTCGCACAACGCTGC
CAATCCCTCCCTTAAACGGTCCAGGGATGGCTTGCTGATTGACGCTATCG
GCCGGGGTATCGGATCCGCCAAGAAGCATCGCACCGAGGATGCAGCAATT
CTGGGTCTCTCATCGCCCGAACAAGTCGAGCGCTGGAACAAGCTGACTGC
TGACCTCCGTCAGTGTGCCGAGGCCAAGGACGCCGATGGTTTCGACCGTG
CAGTACTGGCTTACTTCGGTGCTAACGGCTTCCCTTCACCAGACGACTAC
GTCAACCCGGAGACAACAGTCCATCTTTTGTCTTTGATATTCAAGCTGAA
AGACGATGCCTCAAGCCAGGACCAACTGTCAGCCGCGTCTTCCTTCCGCT
TGTCCATCAATCTGTGGCCCCAGCAAACCTGCCAATGGCTCATCCAGATC
GGTCACCTGTCCCCGAACAACGTCGAGATCGCTCTCCGCCGCTCCTTCAA
ACCCCGTATCCTTCCCTCCCTCCCCACCGGATCTTTCATCCAAGCCCTGA
CCGACCTGGATCCATCTCTCCAACGCCTCATCGACGTCCTCCAAGGCCGC
GTCCTCTTCTCCACCGACGAGCTCGCTTACATCCTCAAGCTCCTCATCAA
CACTGCTCGTTCCCGCTCCGTCACCCTAGACGAGGAAGCCCCCAAGGCGC
TCACCAACGGCGAAGACCAAGACCAGACCCCCACCCAGGCCCTCTCCCAC
GCCGAACCCAGCCTCGGAAACATTTTCCTCGCCCTCAACACCACCCTCGA
AAAGATCCACCGCCACCCCCTCCCCGCCATCACCACATCCATCCGCTCCG
CCCTATCCCGCACCGAGATCATCTCCATGGTGCACCATCTCCGCCTCTCC
CTCGCAACAGGAGGCTACACCTCCCGCTTCACCGAATCCCCTCCCATCCC
CGTCCCCGCCGAGCAAACCCAACCCCCGGTCTCCCTCTCCACAATCGTCG
GCCTCCTTAACGCCTCCGTGGACGCCATCGGCCCCTCCGGCTGGATCTCT
GCCGCCTCGGGCGTCGACGACTCCATCACAGCCCGTGACCAGGAACTCAT
CGCCGACCTGAAGTCCGAAATCTCCGCTGCCCTCGCCGGCATCGAAGAGG
CCACTTACCTCAAGGGCATTCTCCACGAATATCTCCGCTATGCTAACAGC
GCTATCCGCTCCGCCACCACCACCGTCGCCGTCGACTCCGGTAGCGATAC
CCCTGCCTCTGCTATGGTGCGGCTCGAGAAGCTCAACGGCGCGGACCTGA
TGGTCTTCGGCGCCACGGAGGACGATGATGGTCTTGAGGGTGACGCTAGC
GGCAAGCTATTGCCGTTGTCGCTCAAGGCGGGATCAAATGATGTCAGCAA
GACTAAGGTCAAGTTGTCGACCGGTGAGGTCAAGACGAGAAGTAGCAGAG
AGATTGGTTATCTGCGGCGGAAAGCGGCGGGCAAGTACTCCTTCGAGAGA
CTTATTGTATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009202-T1.utr5p1 | KJC3_009202-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009202-T1.utr3p1 | KJC3_009202-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018843 |
| DBxref | PFAM:PF10395 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4841041..4844133 + |
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