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KJC3_009206-T1, KJC3_009206-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009206-T1
Unique NameKJC3_009206-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4861539..4863543+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009206-T1 ID=KJC3_009206-T1|Name=KJC3_009206-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2005bp|location=Sequence derived from alignment at ch6:4861539..4863543+ (Aspergillus niger KJC3)
GTCCAACTGATGATCGTCCAACGATCCAGCCTCTTATCGCGATCCGTGTC
CTGCTCCTCCACGAATGGCATCACCCAATGTGCTTCCCCAGACTTCTTCG
CGGAAACCTTCCATTATCTCCATCTGCAAATCGAGCGACACTTATCAGTT
CCTGCCGTCAATGCAGACGAACGACAGAGTTAATAATGGGTGGCGTCGCC
GTTCCCATCCGCAGTTTCGTCAAAATTAGCCATGGGAAAGTCAACTTCAG
TCACTAGCACAGCCAGAGAATCCGGAGACGATAGCCTCTCCCATACAGAA
AATGGAACGGTCATTGAATACCACGAAACCAAGCGTGGTCTTTCTTCTCG
CCATGTGCAGTTGATGGCCATTGGGGGATCGATTGGAACAGGCCTATTTG
TCGGTATTGGTTCTTACCTCCGCGATGCCGGGCCTCTGTCCCTGTTGCTG
GGGTATCTCTTCTATGGCGTTCTGTTCATCTGGCCCACAAACCTATGCGT
GGGTGAGATGTGCGCCTACCTGCCAATCCGAGGATCTATCTTCGAACTAG
CAGCGCGGTACATCGATCCAGCCTTCGGATTTGCAATGTACGTGAGCTCG
AGACTTGTCCAACGCATACACTGACATCTGTAGGGGCTGGGTATACTTTT
ACGGCGGACTCATGCTTCTCTGCACCGAGTACTCCGCTGTGGCGACGGTG
ATGCAGTACTGGAATACCAGCGTCAACCCAGCCGTCTGGGTCGCCATGGC
CATGGTCGTATGCTTCCTCCTGAACATCGTCGCCGTCAAATACTATGGAG
AGACCGAATTCATTATGGCCTCCACCAAGATTCTCCTTCTCATCGGTCTG
GTCCTCTTGACCTTTATCACCATGCTCGGCGGAAATCCCCACCACGACAT
CTACGGCTTCCGCAACTGGACACACGGCGTCATGTACGAATACTACACCA
CTGGCAACACTGGCCGCTTCCTGGGCTGGTTCTCCGTGGTCGTGTACGCC
GCTTTCTCCGTCGCGGGACCCGACCTTCCAGCCTTGGCCGCCGGCGAGAT
CGAAAACCCGCGCTTCACGATTCCCCGCGTCGTCAAAATGACCTTCTACC
GTATCGTCGGCTTTTACGTCATTGGTGTCCTCGCCGTGAGTATCATCTGC
TCCCCAAACGACCCTCGTCTCATAAGCGCCATCGAATCCTCTGCTGCTGG
ATCCGCCGCCTCTCCATGGGTGATTGGCATCCAGAATCTCGGCATCCACG
GCCTTCCCGGCTTCATCAACTTTCTCATCCTCCTAGCCGGCTGGTCCTGC
GGAAATGCCTACCTCTACAGCTCCAGCCGCACCCTCTACTCGCTCGCACG
CGATCGCCAAGCCCCTGCCTTTCTCCTGAAATGTACCTCCGCCGGAGTCC
CCATCAACTGCGTTCTCGTCGTCTCCCTCCTCTCTTGCATCACATTCCTC
GTCGCCGATACCTCTGCCGTCACGGTCTTCTACTGGTTCGTCGACCTCAC
GACCACCGCCTTTATCCTCACCTACACCGGCATGGTCTGCGTCTTCCTAG
CCTGGTATCGTGCGCTCAAGGCACAGGGCATCGATCGGAAGACGTTCCTC
CCCTGGGCGTCGCCGTGTCAGCCGTACGCAGCTATTGTGGCATTGATAAT
TGGGTGCTTGGTGACGCTGTTTAATGGGTTCACGGTGTTTGTCCCGTTCA
GTGTAGAGGGGTTTATTACTTCGTACTTCGGCGTGGCGTTTTGGGCCGTC
ATGTTCCTGTTTTGGAAGGTGTATCAGGGCACGAAGTGGGTGGATCCAGC
AAAGGCTGATATATTTTCTGGCAAGGCTGAGGTCGATGCTGAGTGTCGGG
TTTGGGAAGATGGAGGGTTCTTGGAGCGGCGGAGGGCGGAGTTGGCAAAG
ATGCATTGGGCGAGAAGGTGGTGGGAGAAGATGTGGTAGAATAGATATCA
GTCTCTAGGAGAGGTTCTACTTGAGTAAGTACTTGGAAGTAACACTCCAA
ATGAT
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Coding sequence (CDS) from alignment at ch6:4861539..4863543+

>KJC3_009206-T1 ID=KJC3_009206-T1|Name=KJC3_009206-T1|organism=Aspergillus niger KJC3|type=CDS|length=3324bp|location=Sequence derived from alignment at ch6:4861539..4863543+ (Aspergillus niger KJC3)
ATGGGAAAGTCAACTTCAGTCACTAGCACAGCCAGAGAATCCGGAGACGA
TAGCCTCTCCCATACAGAAAATGGAACGGTCATTGAATACCACGAAACCA
AGCGTGGTCTTTCTTCTCGCCATGTGCAGTTGATGGCCATTGGGGGATCG
ATTGGAACAGGCCTATTTGTCGGTATTGGTTCTTACCTCCGCGATGCCGG
GCCTCTGTCCCTGTTGCTGGGGTATCTCTTCTATGGCGTTCTGTTCATCT
GGCCCACAAACCTATGCGTGGGTGAGATGTGCGCCTACCTGCCAATCCGA
GGATCTATCTTCGAACTAGCAGCGCGGTACATCGATCCAGCCTTCGGATT
TGCAATGGGCTGGGTATACTTTTACGGCGGACTCATGCTTCTCTGCACCG
AGTACTCCGCTGTGGCGACGGTGATGCAGTACTGGAATACCAGCGTCAAC
CCAGCCGTCTGGGTCGCCATGGCCATGGTCGTATGCTTCCTCCTGAACAT
CGTCGCCGTCAAATACTATGGAGAGACCGAATTCATTATGGCCTCCACCA
AGATTCTCCTTCTCATCGGTCTGGTCCTCTTGACCTTTATCACCATGCTC
GGCGGAAATCCCCACCACGACATCTACGGCTTCCGCAACTGGACACACGG
CGTCATGTACGAATACTACACCACTGGCAACACTGGCCGCTTCCTGGGCT
GGTTCTCCGTGGTCGTGTACGCCGCTTTCTCCGTCGCGGGACCCGACCTT
CCAGCCTTGGCCGCCGGCGAGATCGAAAACCCGCGCTTCACGATTCCCCG
CGTCGTCAAAATGACCTTCTACCGTATCGTCGGCTTTTACGTCATTGGTG
TCCTCGCCGTGAGTATCATCTGCTCCCCAAACGACCCTCGTCTCATAAGC
GCCATCGAATCCTCTGCTGCTGGATCCGCCGCCTCTCCATGGGTGATTGG
CATCCAGAATCTCGGCATCCACGGCCTTCCCGGCTTCATCAACTTTCTCA
TCCTCCTAGCCGGCTGGTCCTGCGGAAATGCCTACCTCTACAGCTCCAGC
CGCACCCTCTACTCGCTCGCACGCGATCGCCAAGCCCCTGCCTTTCTCCT
GAAATGTACCTCCGCCGGAGTCCCCATCAACTGCGTTCTCGTCGTCTCCC
TCCTCTCTTGCATCACATTCCTCGTCGCCGATACCTCTGCCGTCACGGTC
TTCTACTGGTTCGTCGACCTCACGACCACCGCCTTTATCCTCACCTACAC
CGGCATGGTCTGCGTCTTCCTAGCCTGGTATCGTGCGCTCAAGGCACAGG
GCATCGATCGGAAGACGTTCCTCCCCTGGGCGTCGCCGTGTCAGCCGTAC
GCAGCTATTGTGGCATTGATAATTGGGTGCTTGGTGACGCTGTTTAATGG
GTTCACGGTGTTTGTCCCGTTCAGTGTAGAGGGGTTTATTACTTCGTACT
TCGGCGTGGCGTTTTGGGCCGTCATGTTCCTGTTTTGGAAGGTGTATCAG
GGCACGAAGTGGGTGGATCCAGCAAAGGCTGATATATTTTCTGGCAAGGC
TGAGGTCGATGCTGAGTGTCGGGTTTGGGAAGATGGAGGGTTCTTGGAGC
GGCGGAGGGCGGAGTTGGCAAAGATGCATTGGGCGAGAAGGTGGTGGGAG
AAGATGTGGTAGATGGGAAAGTCAACTTCAGTCACTAGCACAGCCAGAGA
ATCCGGAGACGATAGCCTCTCCCATACAGAAAATGGAACGGTCATTGAAT
ACCACGAAACCAAGCGTGGTCTTTCTTCTCGCCATGTGCAGTTGATGGCC
ATTGGGGGATCGATTGGAACAGGCCTATTTGTCGGTATTGGTTCTTACCT
CCGCGATGCCGGGCCTCTGTCCCTGTTGCTGGGGTATCTCTTCTATGGCG
TTCTGTTCATCTGGCCCACAAACCTATGCGTGGGTGAGATGTGCGCCTAC
CTGCCAATCCGAGGATCTATCTTCGAACTAGCAGCGCGGTACATCGATCC
AGCCTTCGGATTTGCAATGGGCTGGGTATACTTTTACGGCGGACTCATGC
TTCTCTGCACCGAGTACTCCGCTGTGGCGACGGTGATGCAGTACTGGAAT
ACCAGCGTCAACCCAGCCGTCTGGGTCGCCATGGCCATGGTCGTATGCTT
CCTCCTGAACATCGTCGCCGTCAAATACTATGGAGAGACCGAATTCATTA
TGGCCTCCACCAAGATTCTCCTTCTCATCGGTCTGGTCCTCTTGACCTTT
ATCACCATGCTCGGCGGAAATCCCCACCACGACATCTACGGCTTCCGCAA
CTGGACACACGGCGTCATGTACGAATACTACACCACTGGCAACACTGGCC
GCTTCCTGGGCTGGTTCTCCGTGGTCGTGTACGCCGCTTTCTCCGTCGCG
GGACCCGACCTTCCAGCCTTGGCCGCCGGCGAGATCGAAAACCCGCGCTT
CACGATTCCCCGCGTCGTCAAAATGACCTTCTACCGTATCGTCGGCTTTT
ACGTCATTGGTGTCCTCGCCGTGAGTATCATCTGCTCCCCAAACGACCCT
CGTCTCATAAGCGCCATCGAATCCTCTGCTGCTGGATCCGCCGCCTCTCC
ATGGGTGATTGGCATCCAGAATCTCGGCATCCACGGCCTTCCCGGCTTCA
TCAACTTTCTCATCCTCCTAGCCGGCTGGTCCTGCGGAAATGCCTACCTC
TACAGCTCCAGCCGCACCCTCTACTCGCTCGCACGCGATCGCCAAGCCCC
TGCCTTTCTCCTGAAATGTACCTCCGCCGGAGTCCCCATCAACTGCGTTC
TCGTCGTCTCCCTCCTCTCTTGCATCACATTCCTCGTCGCCGATACCTCT
GCCGTCACGGTCTTCTACTGGTTCGTCGACCTCACGACCACCGCCTTTAT
CCTCACCTACACCGGCATGGTCTGCGTCTTCCTAGCCTGGTATCGTGCGC
TCAAGGCACAGGGCATCGATCGGAAGACGTTCCTCCCCTGGGCGTCGCCG
TGTCAGCCGTACGCAGCTATTGTGGCATTGATAATTGGGTGCTTGGTGAC
GCTGTTTAATGGGTTCACGGTGTTTGTCCCGTTCAGTGTAGAGGGGTTTA
TTACTTCGTACTTCGGCGTGGCGTTTTGGGCCGTCATGTTCCTGTTTTGG
AAGGTGTATCAGGGCACGAAGTGGGTGGATCCAGCAAAGGCTGATATATT
TTCTGGCAAGGCTGAGGTCGATGCTGAGTGTCGGGTTTGGGAAGATGGAG
GGTTCTTGGAGCGGCGGAGGGCGGAGTTGGCAAAGATGCATTGGGCGAGA
AGGTGGTGGGAGAAGATGTGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009206KJC3_009206Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009206-T1.utr5p1KJC3_009206-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009206-T1.exon1KJC3_009206-T1.exon1Aspergillus niger KJC3exon
KJC3_009206-T1.exon2KJC3_009206-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009206-T1.cdsKJC3_009206-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009206-T1.utr3p1KJC3_009206-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009206-T1KJC3_009206-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004841
DBxrefPFAM:PF13520
DBxrefPFAM:PF00324
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4861539..4863543 +
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