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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4878778..4880981+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009211-T1 ID=KJC3_009211-T1|Name=KJC3_009211-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2204bp|location=Sequence derived from alignment at ch6:4878778..4880981+ (Aspergillus niger KJC3)
AGGAAAAGAGGGATTTCACAATGGAGAAGTAATCCCGATCAGCAGCAATG
CACTGCATCTCTGTCCGTGGGTGACCGGCTTTGATTTCCGTCGTGAAGGC
GACACAGAGATGGTCCGTGAAGCTACATGATCCACTTTCTTGCATGACAC
CCCCCAGGTTTAATTAAACTAGTCCAATATTTATTATTATTCCTTCTGCT
CCCCAGCCCCAATCCTTCTTGTCTGTCTGTCAATTTGTACTCCGCCATGG
CTTCCATCTCCGTGTCTCCCTTCCCCGACGTGGAGATTCCCTCCGTCGAC
CTCTGGTCCTTTCTCTTCGAGCGTTCAGACCGACCCTATCCACCCTCCCA
TCGTATGTCTCCACTATCGCATCATGCCAGATATCACTTTTCTCAATTCT
AACATCCAACAGCCCTCTTCGTCGACCCCCTCACCAACCGCAGCCTCACC
TTCCAGCAAATCCGCCAGCGCGCCCTCCACTTCGGCCACCACCTCCAATC
CCAATGGTCCTGGCAACCCGGCGACGTGCTGGTCGTCTTCGCCCCAAATG
CCATTGACCTCCCCCCGCTGATCTGGGGTACCCTGGCCATCGGCGGTGTC
GTCTGCCCGGTGAATCCCAGCTATCGCGCCGAGGAACTGCATCATCCTTT
GACCGATGCCGGCGCCAAAGCCATCGTTACCACCACTGCGCAAGCCCCAA
TTGTATACGAAGCTATCGATCGTGTGGGCCTCTCCCGCGACCGTGTCATC
CTGCTCGATCAGCTAGAACCACTATGGAATTCCATCAAACTCACGGACTA
CACCGCGCCGCACCGTCCTCCCATCCAGAACCCCGAAAAGGACCTATCAT
TCCTGGTATACTCCTCCGGAACGACCGGCCTCCCTAAGGGCGTGATGCTC
TCCCACCGCAACATGGTCGCGAATTTGCTCCAAAGCGCTGTTGTCGAGCA
GGGCCAGCTGGTCTGGAACCAAGATCGCATTGTGGGCGTTTTGCCGTTCT
TCCATATCTACGGTATTTACCCCACCATACCACCGTTTATAATTGTTGTT
GAATACTGATTTAATGATCATAAAGGAATCGGCTTCCTCCTTAACTACAC
CGTCTACACCGGCGTGCCCATGTACGTTCTCCCGCGCTTTCAATTCCCCT
CTTTCTGCGATACTATCCAGCGCCATCGCATCACCTACGCTTATGTCGTG
CCCCCCGTTATTCTGGAGCTGGTCTCCAACCCTGCGACTACGAAGGATTA
TGATCTCTCTTCCTTGAGGATGGCAGTCTCTGCTGCGGCGCCGCTAGCGG
TGGATTTGATCCGCGCTGCCAGGGAGAAGTTGGGTCTTGTTGTTCGTCAG
GCGTATGGAATGAGCGAGTGTGCGCCTGCTGTTCATTTCCAGGTATTATT
ACCCCCATACCCCCTCCCCCTTTATACATCACACACACAAGAACATATCT
GATGGAAATGGGGCAAAATAGACCTGGTCCGAAGCATCTACCCACCCCGG
CTCCGTCGGCCGCCTCATTCCTAACATGAAAGCGAAATACCACCCCATCC
ATGACGACAGCTCCTCCAAAGAAAAGGAACTCTGGGTTCAAGGCCCCAAT
GTCTTCCTTGGGTATCTGAACAATCCCACTGCGAATAAAGAATCCTTCTC
TGAAGACGGATACTATAAGACCGGGGATGTGGGGTACGAGGACGACCAGG
GGAACTTCTATATCACGGATCGCGTCAAGGAGTTGATCAAGTATAATGGG
TTTCAGGTGGCGCCGGCGGAGTTGGAGGGGATTGTGTTGGGGCATCCGGC
TGTTAGGGATGTGGGGGTTGTTGGGGTGAAGAGTGGGTTGGCGGGGAGTG
AGATGCCCAGGGCTTATGTTGTGGTTAAGGGGGATGTGGTGGGGGATGAA
AGGTTGGAGAAGGAGATTGTGGAGTTTGTGGAGAAGAGGGTTATTGGGTA
TAAGAGGTTGAGAGGGGGTGTGAGGTTCGTGGAGAGTATTCCTAGGAATC
CGTCCGGGAAGATTTTGAGGAGGGAGTTGAAGAGGTTGCAGAGGGAGGCG
AAGTTGTGATGATATTTAGTTACGGTAGTGTGTGGGGTTGTATATGATGT
GATATGGAATACTTGTATATTTGTTTTGCTATCTCCCGGGTGAAATATGT
ATACACAGACATCCAGATGTCTCATCACACATTGAATACCTTCAACGTCT
CCTC back to topCoding sequence (CDS) from alignment at ch6:4878778..4880981+ >KJC3_009211-T1 ID=KJC3_009211-T1|Name=KJC3_009211-T1|organism=Aspergillus niger KJC3|type=CDS|length=6444bp|location=Sequence derived from alignment at ch6:4878778..4880981+ (Aspergillus niger KJC3)
ATGGCTTCCATCTCCGTGTCTCCCTTCCCCGACGTGGAGATTCCCTCCGT
CGACCTCTGGTCCTTTCTCTTCGAGCGTTCAGACCGACCCTATCCACCCT
CCCATCCCCTCTTCGTCGACCCCCTCACCAACCGCAGCCTCACCTTCCAG
CAAATCCGCCAGCGCGCCCTCCACTTCGGCCACCACCTCCAATCCCAATG
GTCCTGGCAACCCGGCGACGTGCTGGTCGTCTTCGCCCCAAATGCCATTG
ACCTCCCCCCGCTGATCTGGGGTACCCTGGCCATCGGCGGTGTCGTCTGC
CCGGTGAATCCCAGCTATCGCGCCGAGGAACTGCATCATCCTTTGACCGA
TGCCGGCGCCAAAGCCATCGTTACCACCACTGCGCAAGCCCCAATTGTAT
ACGAAGCTATCGATCGTGTGGGCCTCTCCCGCGACCGTGTCATCCTGCTC
GATCAGCTAGAACCACTATGGAATTCCATCAAACTCACGGACTACACCGC
GCCGCACCGTCCTCCCATCCAGAACCCCGAAAAGGACCTATCATTCCTGG
TATACTCCTCCGGAACGACCGGCCTCCCTAAGGGCGTGATGCTCTCCCAC
CGCAACATGGTCGCGAATTTGCTCCAAAGCGCTGTTGTCGAGCAGGGCCA
GCTGGTCTGGAACCAAGATCGCATTGTGGGCGTTTTGCCGTTCTTCCATA
TCTACGGAATCGGCTTCCTCCTTAACTACACCGTCTACACCGGCGTGCCC
ATGTACGTTCTCCCGCGCTTTCAATTCCCCTCTTTCTGCGATACTATCCA
GCGCCATCGCATCACCTACGCTTATGTCGTGCCCCCCGTTATTCTGGAGC
TGGTCTCCAACCCTGCGACTACGAAGGATTATGATCTCTCTTCCTTGAGG
ATGGCAGTCTCTGCTGCGGCGCCGCTAGCGGTGGATTTGATCCGCGCTGC
CAGGGAGAAGTTGGGTCTTGTTGTTCGTCAGGCGTATGGAATGAGCGAGT
GTGCGCCTGCTGTTCATTTCCAGACCTGGTCCGAAGCATCTACCCACCCC
GGCTCCGTCGGCCGCCTCATTCCTAACATGAAAGCGAAATACCACCCCAT
CCATGACGACAGCTCCTCCAAAGAAAAGGAACTCTGGGTTCAAGGCCCCA
ATGTCTTCCTTGGGTATCTGAACAATCCCACTGCGAATAAAGAATCCTTC
TCTGAAGACGGATACTATAAGACCGGGGATGTGGGGTACGAGGACGACCA
GGGGAACTTCTATATCACGGATCGCGTCAAGGAGTTGATCAAGTATAATG
GGTTTCAGGTGGCGCCGGCGGAGTTGGAGGGGATTGTGTTGGGGCATCCG
GCTGTTAGGGATGTGGGGGTTGTTGGGGTGAAGAGTGGGTTGGCGGGGAG
TGAGATGCCCAGGGCTTATGTTGTGGTTAAGGGGGATGTGGTGGGGGATG
AAAGGTTGGAGAAGGAGATTGTGGAGTTTGTGGAGAAGAGGGTTATTGGG
TATAAGAGGTTGAGAGGGGGTGTGAGGTTCGTGGAGAGTATTCCTAGGAA
TCCGTCCGGGAAGATTTTGAGGAGGGAGTTGAAGAGGTTGCAGAGGGAGG
CGAAGTTGTGAATGGCTTCCATCTCCGTGTCTCCCTTCCCCGACGTGGAG
ATTCCCTCCGTCGACCTCTGGTCCTTTCTCTTCGAGCGTTCAGACCGACC
CTATCCACCCTCCCATCCCCTCTTCGTCGACCCCCTCACCAACCGCAGCC
TCACCTTCCAGCAAATCCGCCAGCGCGCCCTCCACTTCGGCCACCACCTC
CAATCCCAATGGTCCTGGCAACCCGGCGACGTGCTGGTCGTCTTCGCCCC
AAATGCCATTGACCTCCCCCCGCTGATCTGGGGTACCCTGGCCATCGGCG
GTGTCGTCTGCCCGGTGAATCCCAGCTATCGCGCCGAGGAACTGCATCAT
CCTTTGACCGATGCCGGCGCCAAAGCCATCGTTACCACCACTGCGCAAGC
CCCAATTGTATACGAAGCTATCGATCGTGTGGGCCTCTCCCGCGACCGTG
TCATCCTGCTCGATCAGCTAGAACCACTATGGAATTCCATCAAACTCACG
GACTACACCGCGCCGCACCGTCCTCCCATCCAGAACCCCGAAAAGGACCT
ATCATTCCTGGTATACTCCTCCGGAACGACCGGCCTCCCTAAGGGCGTGA
TGCTCTCCCACCGCAACATGGTCGCGAATTTGCTCCAAAGCGCTGTTGTC
GAGCAGGGCCAGCTGGTCTGGAACCAAGATCGCATTGTGGGCGTTTTGCC
GTTCTTCCATATCTACGGAATCGGCTTCCTCCTTAACTACACCGTCTACA
CCGGCGTGCCCATGTACGTTCTCCCGCGCTTTCAATTCCCCTCTTTCTGC
GATACTATCCAGCGCCATCGCATCACCTACGCTTATGTCGTGCCCCCCGT
TATTCTGGAGCTGGTCTCCAACCCTGCGACTACGAAGGATTATGATCTCT
CTTCCTTGAGGATGGCAGTCTCTGCTGCGGCGCCGCTAGCGGTGGATTTG
ATCCGCGCTGCCAGGGAGAAGTTGGGTCTTGTTGTTCGTCAGGCGTATGG
AATGAGCGAGTGTGCGCCTGCTGTTCATTTCCAGACCTGGTCCGAAGCAT
CTACCCACCCCGGCTCCGTCGGCCGCCTCATTCCTAACATGAAAGCGAAA
TACCACCCCATCCATGACGACAGCTCCTCCAAAGAAAAGGAACTCTGGGT
TCAAGGCCCCAATGTCTTCCTTGGGTATCTGAACAATCCCACTGCGAATA
AAGAATCCTTCTCTGAAGACGGATACTATAAGACCGGGGATGTGGGGTAC
GAGGACGACCAGGGGAACTTCTATATCACGGATCGCGTCAAGGAGTTGAT
CAAGTATAATGGGTTTCAGGTGGCGCCGGCGGAGTTGGAGGGGATTGTGT
TGGGGCATCCGGCTGTTAGGGATGTGGGGGTTGTTGGGGTGAAGAGTGGG
TTGGCGGGGAGTGAGATGCCCAGGGCTTATGTTGTGGTTAAGGGGGATGT
GGTGGGGGATGAAAGGTTGGAGAAGGAGATTGTGGAGTTTGTGGAGAAGA
GGGTTATTGGGTATAAGAGGTTGAGAGGGGGTGTGAGGTTCGTGGAGAGT
ATTCCTAGGAATCCGTCCGGGAAGATTTTGAGGAGGGAGTTGAAGAGGTT
GCAGAGGGAGGCGAAGTTGTGAATGGCTTCCATCTCCGTGTCTCCCTTCC
CCGACGTGGAGATTCCCTCCGTCGACCTCTGGTCCTTTCTCTTCGAGCGT
TCAGACCGACCCTATCCACCCTCCCATCCCCTCTTCGTCGACCCCCTCAC
CAACCGCAGCCTCACCTTCCAGCAAATCCGCCAGCGCGCCCTCCACTTCG
GCCACCACCTCCAATCCCAATGGTCCTGGCAACCCGGCGACGTGCTGGTC
GTCTTCGCCCCAAATGCCATTGACCTCCCCCCGCTGATCTGGGGTACCCT
GGCCATCGGCGGTGTCGTCTGCCCGGTGAATCCCAGCTATCGCGCCGAGG
AACTGCATCATCCTTTGACCGATGCCGGCGCCAAAGCCATCGTTACCACC
ACTGCGCAAGCCCCAATTGTATACGAAGCTATCGATCGTGTGGGCCTCTC
CCGCGACCGTGTCATCCTGCTCGATCAGCTAGAACCACTATGGAATTCCA
TCAAACTCACGGACTACACCGCGCCGCACCGTCCTCCCATCCAGAACCCC
GAAAAGGACCTATCATTCCTGGTATACTCCTCCGGAACGACCGGCCTCCC
TAAGGGCGTGATGCTCTCCCACCGCAACATGGTCGCGAATTTGCTCCAAA
GCGCTGTTGTCGAGCAGGGCCAGCTGGTCTGGAACCAAGATCGCATTGTG
GGCGTTTTGCCGTTCTTCCATATCTACGGAATCGGCTTCCTCCTTAACTA
CACCGTCTACACCGGCGTGCCCATGTACGTTCTCCCGCGCTTTCAATTCC
CCTCTTTCTGCGATACTATCCAGCGCCATCGCATCACCTACGCTTATGTC
GTGCCCCCCGTTATTCTGGAGCTGGTCTCCAACCCTGCGACTACGAAGGA
TTATGATCTCTCTTCCTTGAGGATGGCAGTCTCTGCTGCGGCGCCGCTAG
CGGTGGATTTGATCCGCGCTGCCAGGGAGAAGTTGGGTCTTGTTGTTCGT
CAGGCGTATGGAATGAGCGAGTGTGCGCCTGCTGTTCATTTCCAGACCTG
GTCCGAAGCATCTACCCACCCCGGCTCCGTCGGCCGCCTCATTCCTAACA
TGAAAGCGAAATACCACCCCATCCATGACGACAGCTCCTCCAAAGAAAAG
GAACTCTGGGTTCAAGGCCCCAATGTCTTCCTTGGGTATCTGAACAATCC
CACTGCGAATAAAGAATCCTTCTCTGAAGACGGATACTATAAGACCGGGG
ATGTGGGGTACGAGGACGACCAGGGGAACTTCTATATCACGGATCGCGTC
AAGGAGTTGATCAAGTATAATGGGTTTCAGGTGGCGCCGGCGGAGTTGGA
GGGGATTGTGTTGGGGCATCCGGCTGTTAGGGATGTGGGGGTTGTTGGGG
TGAAGAGTGGGTTGGCGGGGAGTGAGATGCCCAGGGCTTATGTTGTGGTT
AAGGGGGATGTGGTGGGGGATGAAAGGTTGGAGAAGGAGATTGTGGAGTT
TGTGGAGAAGAGGGTTATTGGGTATAAGAGGTTGAGAGGGGGTGTGAGGT
TCGTGGAGAGTATTCCTAGGAATCCGTCCGGGAAGATTTTGAGGAGGGAG
TTGAAGAGGTTGCAGAGGGAGGCGAAGTTGTGAATGGCTTCCATCTCCGT
GTCTCCCTTCCCCGACGTGGAGATTCCCTCCGTCGACCTCTGGTCCTTTC
TCTTCGAGCGTTCAGACCGACCCTATCCACCCTCCCATCCCCTCTTCGTC
GACCCCCTCACCAACCGCAGCCTCACCTTCCAGCAAATCCGCCAGCGCGC
CCTCCACTTCGGCCACCACCTCCAATCCCAATGGTCCTGGCAACCCGGCG
ACGTGCTGGTCGTCTTCGCCCCAAATGCCATTGACCTCCCCCCGCTGATC
TGGGGTACCCTGGCCATCGGCGGTGTCGTCTGCCCGGTGAATCCCAGCTA
TCGCGCCGAGGAACTGCATCATCCTTTGACCGATGCCGGCGCCAAAGCCA
TCGTTACCACCACTGCGCAAGCCCCAATTGTATACGAAGCTATCGATCGT
GTGGGCCTCTCCCGCGACCGTGTCATCCTGCTCGATCAGCTAGAACCACT
ATGGAATTCCATCAAACTCACGGACTACACCGCGCCGCACCGTCCTCCCA
TCCAGAACCCCGAAAAGGACCTATCATTCCTGGTATACTCCTCCGGAACG
ACCGGCCTCCCTAAGGGCGTGATGCTCTCCCACCGCAACATGGTCGCGAA
TTTGCTCCAAAGCGCTGTTGTCGAGCAGGGCCAGCTGGTCTGGAACCAAG
ATCGCATTGTGGGCGTTTTGCCGTTCTTCCATATCTACGGAATCGGCTTC
CTCCTTAACTACACCGTCTACACCGGCGTGCCCATGTACGTTCTCCCGCG
CTTTCAATTCCCCTCTTTCTGCGATACTATCCAGCGCCATCGCATCACCT
ACGCTTATGTCGTGCCCCCCGTTATTCTGGAGCTGGTCTCCAACCCTGCG
ACTACGAAGGATTATGATCTCTCTTCCTTGAGGATGGCAGTCTCTGCTGC
GGCGCCGCTAGCGGTGGATTTGATCCGCGCTGCCAGGGAGAAGTTGGGTC
TTGTTGTTCGTCAGGCGTATGGAATGAGCGAGTGTGCGCCTGCTGTTCAT
TTCCAGACCTGGTCCGAAGCATCTACCCACCCCGGCTCCGTCGGCCGCCT
CATTCCTAACATGAAAGCGAAATACCACCCCATCCATGACGACAGCTCCT
CCAAAGAAAAGGAACTCTGGGTTCAAGGCCCCAATGTCTTCCTTGGGTAT
CTGAACAATCCCACTGCGAATAAAGAATCCTTCTCTGAAGACGGATACTA
TAAGACCGGGGATGTGGGGTACGAGGACGACCAGGGGAACTTCTATATCA
CGGATCGCGTCAAGGAGTTGATCAAGTATAATGGGTTTCAGGTGGCGCCG
GCGGAGTTGGAGGGGATTGTGTTGGGGCATCCGGCTGTTAGGGATGTGGG
GGTTGTTGGGGTGAAGAGTGGGTTGGCGGGGAGTGAGATGCCCAGGGCTT
ATGTTGTGGTTAAGGGGGATGTGGTGGGGGATGAAAGGTTGGAGAAGGAG
ATTGTGGAGTTTGTGGAGAAGAGGGTTATTGGGTATAAGAGGTTGAGAGG
GGGTGTGAGGTTCGTGGAGAGTATTCCTAGGAATCCGTCCGGGAAGATTT
TGAGGAGGGAGTTGAAGAGGTTGCAGAGGGAGGCGAAGTTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009211-T1.utr5p1 | KJC3_009211-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009211-T1.utr3p1 | KJC3_009211-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020845 |
| DBxref | InterPro:IPR025110 |
| DBxref | InterPro:IPR000873 |
| DBxref | InterPro:IPR042099 |
| DBxref | PFAM:PF13193 |
| DBxref | PFAM:PF00501 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4878778..4880981 + |
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