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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4927607..4929348+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009229-T1 ID=KJC3_009229-T1|Name=KJC3_009229-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1742bp|location=Sequence derived from alignment at ch6:4927607..4929348+ (Aspergillus niger KJC3)
GAAAGAGGAAACAAACAAGGTTCAATGAACGGATCTCGTATCCATCGTTC
AACCATGGAACCTCCCTCCGACTGACTTTCCCCGCCATTCCGGCCCAACC
CCGAATCACCACCATCAGGAGATTGCCTCATCTGAAAGCCCTCCGATATT
ATATCTCATGAAAAGAAGAAACGTCGATCCTAGGATACACCTATGGCCTT
CTATGCTGCTGCCAGGAAACGCCCCCACCGCAGCATCCACGACCCGGAGG
TGCGCCCGCTGCGTCTAGCCGTACTGAAAGCCGCCACCATCAATTTGCTC
ATCTTACAACTCCTCTTTCTCGGCCTGTTCTGCTATCTATTCGGGTCCAT
CTTTCAACAAACCACCCATATCCACAACCTCAATGTCCTCTTCGTCGACT
ATGATGGCGGGGCCATCGGTAGGGCCGTGCGCACTGCCTACCAACAACTG
CAAGGGTCCGGCTTCCCGACCCTCCGCGAGCAGTCAGCCGAGGCCTATCC
CAATCCCGCGTCGATCGTCTCCACCGTCTGCAATATTCACTACTGGGGTG
GCTTTTACATCGCCGCAAATGCTTCTTCGCGTCTGTCAGCTGCTCTCACC
GGCATCGGGACAGCAACCTACAATACAAGCGATGTCATGACCCTAGTCTG
GAATGAAGCGCGCTACTCCACCGTCGTGGATTCTGCTATCCAGTCCAACA
TCCTCTCTCTATCCGAAGCTGCTCGCATCGTCTACACGACCACCAATGGC
CCATCCATTCTCCAGACGGTGAACACTTCCGACCAGACAGCCATCACCAC
TCTCGCTGACCCCTGGACGCTCTCCACCATTAACATCCAACCCACCACCC
AAGGCTCCCGCCTCATTTACAACACCCTCGTCGTCATCCTCATCCTCATA
CAAGAATTCTTTTATCTGGGCTACCTCAATGGCCTCTACCAGCAATTCCA
CCTGTACACCTCCGTCGACGCGCACCGCATAGCCATCATCCGCCAGCTCA
TCTCAGGAATATACACCTTCATCGGATCGCTCTGCACGACGGGTGCGATC
TGGGCCTTCCGATACGGTTGGCATGTCAACGGCGGCCAGTTCATGATCAC
CTGGATGGCGCTGTGGTTGTTCGCGCATTTGAACTTTCTGGTTCTGGATG
TGTTTACTATCTGGTTAGCGCCGCCATTTGTCCCCATGGCGCTTATATCA
TGGGTCGTGCTGAACGTTTCATCAATCCTGTTGCCATTTGAGCTATCTCC
TGGCTTTTATAAGTGGGGATATGCGCTGCCCGCGCATGCTATATTCCAAG
TCATGGTGGATATTTGGTCCGGTGGGTGTAATCCGCAACTTGATTATGCG
TTGCCGGTACTGTGTGCGTATGAGGTGGTTGGGATGGTGCTCAGTAGCCT
CGGGGTGTATCGTCGGGCGCACTATGCGGTTCTGGCGGAGGAGGCGAAGA
AGGAATCACAGGAGCGCTTGGCTGTTGAGGCAGAGGGAGAGGCAGAGAAG
GAAACCCCTGGTACTAATGGAGAGGAGGGACCAGCCGGGGAGGCAGAGGC
AGAGGAAGGGGAACCGTCAGAGATGCAGCCAGAGGGATTCGGAGAGCGCA
TGAGGCAGGAAATGTCACGGCTGGAGAGAGTGCACACCAGTCGGCAGAAC
ACGGGGCCATCCTTCGATCTGCCATACACCGACTAGCTACTGGGGAGAGC
CTATCGTATATAATTAATCGCAACCAATATGATCACTCTGCG back to topCoding sequence (CDS) from alignment at ch6:4927607..4929348+ >KJC3_009229-T1 ID=KJC3_009229-T1|Name=KJC3_009229-T1|organism=Aspergillus niger KJC3|type=CDS|length=1494bp|location=Sequence derived from alignment at ch6:4927607..4929348+ (Aspergillus niger KJC3)
ATGGCCTTCTATGCTGCTGCCAGGAAACGCCCCCACCGCAGCATCCACGA
CCCGGAGGTGCGCCCGCTGCGTCTAGCCGTACTGAAAGCCGCCACCATCA
ATTTGCTCATCTTACAACTCCTCTTTCTCGGCCTGTTCTGCTATCTATTC
GGGTCCATCTTTCAACAAACCACCCATATCCACAACCTCAATGTCCTCTT
CGTCGACTATGATGGCGGGGCCATCGGTAGGGCCGTGCGCACTGCCTACC
AACAACTGCAAGGGTCCGGCTTCCCGACCCTCCGCGAGCAGTCAGCCGAG
GCCTATCCCAATCCCGCGTCGATCGTCTCCACCGTCTGCAATATTCACTA
CTGGGGTGGCTTTTACATCGCCGCAAATGCTTCTTCGCGTCTGTCAGCTG
CTCTCACCGGCATCGGGACAGCAACCTACAATACAAGCGATGTCATGACC
CTAGTCTGGAATGAAGCGCGCTACTCCACCGTCGTGGATTCTGCTATCCA
GTCCAACATCCTCTCTCTATCCGAAGCTGCTCGCATCGTCTACACGACCA
CCAATGGCCCATCCATTCTCCAGACGGTGAACACTTCCGACCAGACAGCC
ATCACCACTCTCGCTGACCCCTGGACGCTCTCCACCATTAACATCCAACC
CACCACCCAAGGCTCCCGCCTCATTTACAACACCCTCGTCGTCATCCTCA
TCCTCATACAAGAATTCTTTTATCTGGGCTACCTCAATGGCCTCTACCAG
CAATTCCACCTGTACACCTCCGTCGACGCGCACCGCATAGCCATCATCCG
CCAGCTCATCTCAGGAATATACACCTTCATCGGATCGCTCTGCACGACGG
GTGCGATCTGGGCCTTCCGATACGGTTGGCATGTCAACGGCGGCCAGTTC
ATGATCACCTGGATGGCGCTGTGGTTGTTCGCGCATTTGAACTTTCTGGT
TCTGGATGTGTTTACTATCTGGTTAGCGCCGCCATTTGTCCCCATGGCGC
TTATATCATGGGTCGTGCTGAACGTTTCATCAATCCTGTTGCCATTTGAG
CTATCTCCTGGCTTTTATAAGTGGGGATATGCGCTGCCCGCGCATGCTAT
ATTCCAAGTCATGGTGGATATTTGGTCCGGTGGGTGTAATCCGCAACTTG
ATTATGCGTTGCCGGTACTGTGTGCGTATGAGGTGGTTGGGATGGTGCTC
AGTAGCCTCGGGGTGTATCGTCGGGCGCACTATGCGGTTCTGGCGGAGGA
GGCGAAGAAGGAATCACAGGAGCGCTTGGCTGTTGAGGCAGAGGGAGAGG
CAGAGAAGGAAACCCCTGGTACTAATGGAGAGGAGGGACCAGCCGGGGAG
GCAGAGGCAGAGGAAGGGGAACCGTCAGAGATGCAGCCAGAGGGATTCGG
AGAGCGCATGAGGCAGGAAATGTCACGGCTGGAGAGAGTGCACACCAGTC
GGCAGAACACGGGGCCATCCTTCGATCTGCCATACACCGACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009229-T1.utr5p1 | KJC3_009229-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009229-T1.utr3p1 | KJC3_009229-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022703 |
| DBxref | PFAM:PF12051 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4927607..4929348 + |
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