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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4934150..4935599- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009232-T1 ID=KJC3_009232-T1|Name=KJC3_009232-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1450bp|location=Sequence derived from alignment at ch6:4934150..4935599- (Aspergillus niger KJC3)
ATGGAGACACCAGACTATATTCTTGATCTGGAAGGCGAGATCTTTATTAC
GTTGAAGTATCCTAATTGCGAATTCGTTCCCTGTGAACAAGAAGGACCGC
AGAAGGTCAGCTCTGAAGTCGTGGACCACGAGCTATTGCAACGTTGGATG
GGAATGGCTATAGACGCCGGAATCATGGACGAGAAGTATAAGAAGCTGAC
GACTGTTCCATTTCTGGTTGAGCCTGATGACGACGAAATCCAGGCGATTG
AGCTGGAGAGTGGCATCTGGGGTATCGGCGGGCCACCTGTTGACATACTC
CCCAGCTCACTGCTGACCGCAGAGGAACGAATATCGCGCAGACGTGCCAG
GGAGGAATTAGAGAAAAAGATGCTCCGGCTCATGAGCGATGAGAGTGACA
CTGAGGCAGTGGTTATCTTCCAAGCATCGGCGAAGCATCTTATGGCCGCA
TCGTCGTACTTTAGGTCCCTTCTCACCATCGGCATGGCAGAGAGCAACAC
ATTCCAGGCGGAAGGAAGACTCTCGACAACAGCAGAATGTTGGGATGAAG
ACGCGCTACTCTACGTTCTGAGAATCATTCATTGCCAGCACCATGAGCTT
CCTGACAAAGTTGACCTGGAGATGTTGGGCAAGGTCTGTGTGGTTGCTGA
TTACTATGATGTCCGTGATGCGGTACGTTTTGCAGCTCGGCCATGGATTG
CCAAGCTTGACCCCCAAGGACCCGACGACAGCTACCGCGAGTCTGTGATC
TGGCTCTGGATCGGAATATTTTTTCGAATGCCGGGTGTTTTCAAGGCAGC
GAGCTTGGCTTTGATCAAGGAAGGAAAAACACACATGCCGCCTCTGGGTC
TTCCGATTCCGGCACCGATCGTGGGTAAGTGTATATCTAACCGGTATAAC
ACGAAGTACTCTCGCTTACAACTAATTAGAAGAAATCAACGCCCGCCGAA
TCAAGGCCATTGAAGGATTGATGGACCACATCTATCATGTTGAAGACGAA
TACCTGAGCGGGAAGAGGGGTTGCTCGTTTGAATGCAGTTCCATGCTGTA
TGGGGCCCTTATGAAGAACATGAGCGTATACGGACTGAGCAGGTCTGAGT
TCAGGGCGCCCTTCACACACAATAGCTACACGTCTCTTGCGAATCTCATT
GATCGGTTCAGGCAGCCGCGCTGGTACGATCCTAGGAGTTCCAAGTATCT
CTGCTGGCAGTACCTCGAGCACGAGTGCCATGATGCCCACTTCTGGGAAA
TTAGAGCAGGAAGGTTCCTTGATGATGAAGGTTTGGAGTTGAAGGATTTT
ATCAAGATGGACTGATGACGGACTGAGGATCCTGACATTTTCTCCTTTGT
ATGCCAGCGATGTTTTGCTGATCGGGTGGTAAGGAGCCGTCGTGACTTAG
GTGATGAAACTGGAAGCAGTGAAGAACTAGTTGAAAATTGTATCTAGGAA
back to topCoding sequence (CDS) from alignment at ch6:4934150..4935599- >KJC3_009232-T1 ID=KJC3_009232-T1|Name=KJC3_009232-T1|organism=Aspergillus niger KJC3|type=CDS|length=2520bp|location=Sequence derived from alignment at ch6:4934150..4935599- (Aspergillus niger KJC3)
AAGAAATCAACGCCCGCCGAATCAAGGCCATTGAAGGATTGATGGACCAC
ATCTATCATGTTGAAGACGAATACCTGAGCGGGAAGAGGGGTTGCTCGTT
TGAATGCAGTTCCATGCTGTATGGGGCCCTTATGAAGAACATGAGCGTAT
ACGGACTGAGCAGGTCTGAGTTCAGGGCGCCCTTCACACACAATAGCTAC
ACGTCTCTTGCGAATCTCATTGATCGGTTCAGGCAGCCGCGCTGGTACGA
TCCTAGGAGTTCCAAGTATCTCTGCTGGCAGTACCTCGAGCACGAGTGCC
ATGATGCCCACTTCTGGGAAATTAGAGCAGGAAGGTTCCTTGATGATGAA
GGTTTGGAGTTGAAGGATTTTATCAAGATGGACTGAATGGAGACACCAGA
CTATATTCTTGATCTGGAAGGCGAGATCTTTATTACGTTGAAGTATCCTA
ATTGCGAATTCGTTCCCTGTGAACAAGAAGGACCGCAGAAGGTCAGCTCT
GAAGTCGTGGACCACGAGCTATTGCAACGTTGGATGGGAATGGCTATAGA
CGCCGGAATCATGGACGAGAAGTATAAGAAGCTGACGACTGTTCCATTTC
TGGTTGAGCCTGATGACGACGAAATCCAGGCGATTGAGCTGGAGAGTGGC
ATCTGGGGTATCGGCGGGCCACCTGTTGACATACTCCCCAGCTCACTGCT
GACCGCAGAGGAACGAATATCGCGCAGACGTGCCAGGGAGGAATTAGAGA
AAAAGATGCTCCGGCTCATGAGCGATGAGAGTGACACTGAGGCAGTGGTT
ATCTTCCAAGCATCGGCGAAGCATCTTATGGCCGCATCGTCGTACTTTAG
GTCCCTTCTCACCATCGGCATGGCAGAGAGCAACACATTCCAGGCGGAAG
GAAGACTCTCGACAACAGCAGAATGTTGGGATGAAGACGCGCTACTCTAC
GTTCTGAGAATCATTCATTGCCAGCACCATGAGCTTCCTGACAAAGTTGA
CCTGGAGATGTTGGGCAAGGTCTGTGTGGTTGCTGATTACTATGATGTCC
GTGATGCGGTACGTTTTGCAGCTCGGCCATGGATTGCCAAGCTTGACCCC
CAAGGACCCGACGACAGCTACCGCGAGTCTGTGATCTGGCTCTGGATCGG
AATATTTTTTCGAATGCCGGGTGTTTTCAAGGCAGCGAGCTTGGCTTTGA
TCAAGGAAGGAAAAACACACATGCCGCCTCTGGGTCTTCCGATTCCGGCA
CCGATCGTGGAAGAAATCAACGCCCGCCGAATCAAGGCCATTGAAGGATT
GATGGACCACATCTATCATGTTGAAGACGAATACCTGAGCGGGAAGAGGG
GTTGCTCGTTTGAATGCAGTTCCATGCTGTATGGGGCCCTTATGAAGAAC
ATGAGCGTATACGGACTGAGCAGGTCTGAGTTCAGGGCGCCCTTCACACA
CAATAGCTACACGTCTCTTGCGAATCTCATTGATCGGTTCAGGCAGCCGC
GCTGGTACGATCCTAGGAGTTCCAAGTATCTCTGCTGGCAGTACCTCGAG
CACGAGTGCCATGATGCCCACTTCTGGGAAATTAGAGCAGGAAGGTTCCT
TGATGATGAAGGTTTGGAGTTGAAGGATTTTATCAAGATGGACTGAATGG
AGACACCAGACTATATTCTTGATCTGGAAGGCGAGATCTTTATTACGTTG
AAGTATCCTAATTGCGAATTCGTTCCCTGTGAACAAGAAGGACCGCAGAA
GGTCAGCTCTGAAGTCGTGGACCACGAGCTATTGCAACGTTGGATGGGAA
TGGCTATAGACGCCGGAATCATGGACGAGAAGTATAAGAAGCTGACGACT
GTTCCATTTCTGGTTGAGCCTGATGACGACGAAATCCAGGCGATTGAGCT
GGAGAGTGGCATCTGGGGTATCGGCGGGCCACCTGTTGACATACTCCCCA
GCTCACTGCTGACCGCAGAGGAACGAATATCGCGCAGACGTGCCAGGGAG
GAATTAGAGAAAAAGATGCTCCGGCTCATGAGCGATGAGAGTGACACTGA
GGCAGTGGTTATCTTCCAAGCATCGGCGAAGCATCTTATGGCCGCATCGT
CGTACTTTAGGTCCCTTCTCACCATCGGCATGGCAGAGAGCAACACATTC
CAGGCGGAAGGAAGACTCTCGACAACAGCAGAATGTTGGGATGAAGACGC
GCTACTCTACGTTCTGAGAATCATTCATTGCCAGCACCATGAGCTTCCTG
ACAAAGTTGACCTGGAGATGTTGGGCAAGGTCTGTGTGGTTGCTGATTAC
TATGATGTCCGTGATGCGGTACGTTTTGCAGCTCGGCCATGGATTGCCAA
GCTTGACCCCCAAGGACCCGACGACAGCTACCGCGAGTCTGTGATCTGGC
TCTGGATCGGAATATTTTTTCGAATGCCGGGTGTTTTCAAGGCAGCGAGC
TTGGCTTTGATCAAGGAAGGAAAAACACACATGCCGCCTCTGGGTCTTCC
GATTCCGGCACCGATCGTGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009232-T1.utr3p1 | KJC3_009232-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011333 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4934150..4935599 - |
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