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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4975461..4976505+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009250-T1 ID=KJC3_009250-T1|Name=KJC3_009250-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1045bp|location=Sequence derived from alignment at ch6:4975461..4976505+ (Aspergillus niger KJC3)
ATGCCCATCATATCTCTTCCTGTTGAGTTGGTGACCGAAATCTGCACACA
CCTGGGAATACCCGCCTTGCATGCGCTTCGACTGACCTGTCGGTCGCTCT
TCATTACAACGGCCGATACCTGTCGACGTCGCACTTTCCGCCACATTTGC
GTCCTGCTCACCACCGACGGGCTTCATCGACTGTCGGAGCTTTCCATGCA
GGAGGGCATCTGCGAACATGTAGAAAGCCTTATGGTTGTCCCGGAGCTGT
TTAATGGTGAATATAACGCCCCCTATTCGACTTTCTCGCGGTGGGATTGT
ATTCAAGGGGCTTTGGGGAGATCCCAGCAGGAGCAGGACTCTGAACAAGT
CGATGGCAAGGCATACTATGCCGTCTACGAGGCTGCCATGGCGGACCATC
AACACGCGCTGACCTCGGCGACTTCCATCATCCTTCTCCAAGACTGTCTG
AGGCGGTTTGTCAACTTGTCATCGGTCGGGTTACAAGATTGCCCTACCGC
AGGGACAGGGGACACCTGTCTAGGCTGGCGCAGACTCAGAGCTCAGCTGG
GTTTCTACCCCGACTTCGAGAGGGAGCGCTTCCCGCACAAACAGATCGCC
AGAGAGCATGATCTGGCTTTCTCTCTCCTTGCAGAGGCTCTGATTGCCAG
TGGTCGAAAGGTGAAGAGGCTGTCGACCTGTGGCTCACACTGCTACGGTG
TGGGACTTGGCAGGATGCAACTGACCCCCGAAGCATGGGCATCTTTTCTT
TCCTGCCTCAAGGGATTGTCGCACTTACACTTCTGTCATGAGAGCTCGGC
CATTTCTTCTCACCCAGAGCGTCTGTGTGAGTTGCTGGCGGCGGTTGCCC
CAAGTCTCGAAACACTACGCTACCAAATCGGGCCCTACACTTCGTCAATC
TACCGGGAACCTTTCCGTGTTCGTGAGCTTTTTCAAGGGATACCGTTTCA
ACGCCTGCAAACTGTGCGCCTGCGGCTAATAGAACTTCCAATGGACACTC
TAGAACAATTCCTTCGTGCAGTATCACCCACTTTGCAAATCCTAA back to topCoding sequence (CDS) from alignment at ch6:4975461..4976505+ >KJC3_009250-T1 ID=KJC3_009250-T1|Name=KJC3_009250-T1|organism=Aspergillus niger KJC3|type=CDS|length=1920bp|location=Sequence derived from alignment at ch6:4975461..4976505+ (Aspergillus niger KJC3)
ATGCCCATCATATCTCTTCCTGTTGAGTTGGTGACCGAAATCTGCACACA
CCTGGGAATACCCGCCTTGCATGCGCTTCGACTGACCTGTCGGTCGCTCT
TCATTACAACGGCCGATACCTGTCGACGTCGCACTTTCCGCCACATTTGC
GTCCTGCTCACCACCGACGGGCTTCATCGACTGTCGGAGCTTTCCATGCA
GGAGGGCATCTGCGAACATGTAGAAAGCCTTATGGTTGTCCCGGAGCTGT
TTAATGGTGAATATAACGCCCCCTATTCGACTTTCTCGCGGTGGGATTGT
ATTCAAGGGGCTTTGGGGAGATCCCAGCAGGAGCAGGACTCTGAACAAGT
CGATGGCAAGGCATACTATGCCGTCTACGAGGCTGCCATGGCGGACCATC
AACACGCGCTGACCTCGGCGACTTCCATCATCCTTCTCCAAGACTGTCTG
AGGCGGTTTGTCAACTTGTCATCGGTCGGGTTACAAGATTGCCCTACCGC
AGGGACAGGGGACACCTGTCTAGGCTGGCGCAGACTCAGAGCTCAGCTGG
GTTTCTACCCCGACTTCGAGAGGGAGCGCTTCCCGCACAAACAGATCGCC
AGAGAGCATGATCTGGCTTTCTCTCTCCTTGCAGAGGCTCTGATTGCCAG
TGGTCGAAAGGTGAAGAGGCTGTCGACCTGTGGCTCACACTGCTACGGTG
TGGGACTTGGCAGGATGCAACTGACCCCCGAAGCATGGGCATCTTTTCTT
TCCTGCCTCAAGGGATTGTCGCACTTACACTTCTGTCATGAGAGCTCGGC
CATTTCTTCTCACCCAGAGCGTCTGTGTGAGTTGCTGGCGGCGGTTGCCC
CAAGTCTCGAAACACTACGCTACCAAATCGGGCCCTACACTTCGTCAATC
TACCGGGAACCTTTCCGTAACAATTCCTTCGTGCAGTATCACCCACTTTG
CAAATCCTAAATGCCCATCATATCTCTTCCTGTTGAGTTGGTGACCGAAA
TCTGCACACACCTGGGAATACCCGCCTTGCATGCGCTTCGACTGACCTGT
CGGTCGCTCTTCATTACAACGGCCGATACCTGTCGACGTCGCACTTTCCG
CCACATTTGCGTCCTGCTCACCACCGACGGGCTTCATCGACTGTCGGAGC
TTTCCATGCAGGAGGGCATCTGCGAACATGTAGAAAGCCTTATGGTTGTC
CCGGAGCTGTTTAATGGTGAATATAACGCCCCCTATTCGACTTTCTCGCG
GTGGGATTGTATTCAAGGGGCTTTGGGGAGATCCCAGCAGGAGCAGGACT
CTGAACAAGTCGATGGCAAGGCATACTATGCCGTCTACGAGGCTGCCATG
GCGGACCATCAACACGCGCTGACCTCGGCGACTTCCATCATCCTTCTCCA
AGACTGTCTGAGGCGGTTTGTCAACTTGTCATCGGTCGGGTTACAAGATT
GCCCTACCGCAGGGACAGGGGACACCTGTCTAGGCTGGCGCAGACTCAGA
GCTCAGCTGGGTTTCTACCCCGACTTCGAGAGGGAGCGCTTCCCGCACAA
ACAGATCGCCAGAGAGCATGATCTGGCTTTCTCTCTCCTTGCAGAGGCTC
TGATTGCCAGTGGTCGAAAGGTGAAGAGGCTGTCGACCTGTGGCTCACAC
TGCTACGGTGTGGGACTTGGCAGGATGCAACTGACCCCCGAAGCATGGGC
ATCTTTTCTTTCCTGCCTCAAGGGATTGTCGCACTTACACTTCTGTCATG
AGAGCTCGGCCATTTCTTCTCACCCAGAGCGTCTGTGTGAGTTGCTGGCG
GCGGTTGCCCCAAGTCTCGAAACACTACGCTACCAAATCGGGCCCTACAC
TTCGTCAATCTACCGGGAACCTTTCCGTAACAATTCCTTCGTGCAGTATC
ACCCACTTTGCAAATCCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4975461..4976505 + |
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