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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:5011060..5012579- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009261-T1 ID=KJC3_009261-T1|Name=KJC3_009261-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1520bp|location=Sequence derived from alignment at ch6:5011060..5012579- (Aspergillus niger KJC3)
ATGCTAGGATATGCAGGACTGCTTGTCATCTCGGCCAAGTTCAGCGACAT
ATTTGGCCGCAAGTCATGCCTGCTGGTCGCTGTTTTTCTCTTCGTGGTGT
TTTCCGGGGCTTGCGGGGCAGCCCAAACCATGGAGCAACTGTAAGTCGAC
ATACCTTGTTCGGGCCCTTTGATAGTCAATAACCGTGTGGTGCACTAGGA
TCGTCTTTCGTGCTTTTCAGGGTGTTGGCGGAGCGGGCAACTATTCTCTC
TGTGCTGCCATTCTGCTGGACCTAGTCCCGACAGAGAAATATGCGACGTA
CATGAGTTCACTATCCCTGGTATACGCGATATCGTTACTATTTGGACCTC
TGATGGGAGGGGGTATCTCCGACTCGTCCACATGGCGCTGGGTGTTTCTG
TTGAATGTCCCTCCGGGCGCACTGGCCGGGATAGGGCTCGCTCTGGTGCT
GCCCAATCGGTTCCCCTATCACAATGAACCATCCAAGGAGAAGACAATGT
CATCCGTGCTGGCGTCATTGCGGCAGATGATTCAGAGAGTCGACTTACTC
GGCTCCAGCTTGCTGTTAGTTGCAACTATTCTCCTCGTAACGGCTTTGGA
GGAAGCCAATGAGGAATACACTTGGAATTCGGCTTTTACCATTGTGCTGC
TTATCATCTCCGGACTGGCGTGGATCGCCTTTCTACTGTGGGAAAGACGG
GTGACTCTCTATTCGAAGCACATTGAGCCGGTCTTCCCGTGGCGGTTCGT
TTGTAACCGAGTTTGGGTCGGAATGTTGTTGTAGGTCTTCTTTCTCTGCC
ATTGTTAACCCGGCTATTTCATTGACTGGCATCTCTGTCACCCCAAGAAA
TTCCGTCTGTCTGGGGGCAGTGTGGTTCTCGACCATGTTCCAGTTACCCC
AGCGGTTCCAAATCGTCAACCAGCTTACGGCTTTCCAAGCGGCTGTCCGA
TTCATCCCTTTCACCGTGGCAAGTCCCGTGGCATCAGTCCTGGCACCGGC
TATCGGAAAAGTGTTCAAGATTCCGCTGCTATACCTGGTAATCTTCGCGT
CTTTGCTGCAGGTGGTTGCTTACGTCCTTCTGGGCACTCTCCCCGACTCA
CTGTCGATCACCTCGGCGCAGTATGGATACCAGGTCCTGGCCGGCTTCGG
GTGTGGCATCAACATCACCCTGCTGATCCTGATGACACCCTTCACGATCG
AAAAGCGAGACAATGCAGTCGCCATGGGGGCCATTACGCAGTTCCGAGTC
ATGGGTGGTTGCATTGGAATTTCTGTGCTGACGGCGGTGGCCAATGGTTA
CCTGCAGTCTCACTTGCAGCAATGGCTCACCCCGACCGAGATGCAGTTGG
TCCTGCACTCCGCGGAAAGCCTTTCCACTCTCCCAGCGTCAGCACAAAGC
CTAGTTCGCGGGACCTTCTCGGCCAGTTACAATCTGCAGATGAAAATTTT
GGCGGGGTTCGCTGGGGGCCAGGTTCTGGCCTCGGTGCTTATGTGGCAGA
GGGAACAAATCATCGTCTAA back to topCoding sequence (CDS) from alignment at ch6:5011060..5012579- >KJC3_009261-T1 ID=KJC3_009261-T1|Name=KJC3_009261-T1|organism=Aspergillus niger KJC3|type=CDS|length=4185bp|location=Sequence derived from alignment at ch6:5011060..5012579- (Aspergillus niger KJC3)
AAATTCCGTCTGTCTGGGGGCAGTGTGGTTCTCGACCATGTTCCAGTTAC
CCCAGCGGTTCCAAATCGTCAACCAGCTTACGGCTTTCCAAGCGGCTGTC
CGATTCATCCCTTTCACCGTGGCAAGTCCCGTGGCATCAGTCCTGGCACC
GGCTATCGGAAAAGTGTTCAAGATTCCGCTGCTATACCTGGTAATCTTCG
CGTCTTTGCTGCAGGTGGTTGCTTACGTCCTTCTGGGCACTCTCCCCGAC
TCACTGTCGATCACCTCGGCGCAGTATGGATACCAGGTCCTGGCCGGCTT
CGGGTGTGGCATCAACATCACCCTGCTGATCCTGATGACACCCTTCACGA
TCGAAAAGCGAGACAATGCAGTCGCCATGGGGGCCATTACGCAGTTCCGA
GTCATGGGTGGTTGCATTGGAATTTCTGTGCTGACGGCGGTGGCCAATGG
TTACCTGCAGTCTCACTTGCAGCAATGGCTCACCCCGACCGAGATGCAGT
TGGTCCTGCACTCCGCGGAAAGCCTTTCCACTCTCCCAGCGTCAGCACAA
AGCCTAGTTCGCGGGACCTTCTCGGCCAGTTACAATCTGCAGATGAAAAT
TTTGGCGGGGTTCGCTGGGGGCCAGGTTCTGGCCTCGGTGCTTATGTGGC
AGAGGGAACAAATCATCGTCTAAGATCGTCTTTCGTGCTTTTCAGGGTGT
TGGCGGAGCGGGCAACTATTCTCTCTGTGCTGCCATTCTGCTGGACCTAG
TCCCGACAGAGAAATATGCGACGTACATGAGTTCACTATCCCTGGTATAC
GCGATATCGTTACTATTTGGACCTCTGATGGGAGGGGGTATCTCCGACTC
GTCCACATGGCGCTGGGTGTTTCTGTTGAATGTCCCTCCGGGCGCACTGG
CCGGGATAGGGCTCGCTCTGGTGCTGCCCAATCGGTTCCCCTATCACAAT
GAACCATCCAAGGAGAAGACAATGTCATCCGTGCTGGCGTCATTGCGGCA
GATGATTCAGAGAGTCGACTTACTCGGCTCCAGCTTGCTGTTAGTTGCAA
CTATTCTCCTCGTAACGGCTTTGGAGGAAGCCAATGAGGAATACACTTGG
AATTCGGCTTTTACCATTGTGCTGCTTATCATCTCCGGACTGGCGTGGAT
CGCCTTTCTACTGTGGGAAAGACGGGTGACTCTCTATTCGAAGCACATTG
AGCCGGTCTTCCCGTGGCGGTTCGTTTGTAACCGAGTTTGGGTCGGAATG
TTGTTATGCTAGGATATGCAGGACTGCTTGTCATCTCGGCCAAGTTCAGC
GACATATTTGGCCGCAAGTCATGCCTGCTGGTCGCTGTTTTTCTCTTCGT
GGTGTTTTCCGGGGCTTGCGGGGCAGCCCAAACCATGGAGCAACTAAATT
CCGTCTGTCTGGGGGCAGTGTGGTTCTCGACCATGTTCCAGTTACCCCAG
CGGTTCCAAATCGTCAACCAGCTTACGGCTTTCCAAGCGGCTGTCCGATT
CATCCCTTTCACCGTGGCAAGTCCCGTGGCATCAGTCCTGGCACCGGCTA
TCGGAAAAGTGTTCAAGATTCCGCTGCTATACCTGGTAATCTTCGCGTCT
TTGCTGCAGGTGGTTGCTTACGTCCTTCTGGGCACTCTCCCCGACTCACT
GTCGATCACCTCGGCGCAGTATGGATACCAGGTCCTGGCCGGCTTCGGGT
GTGGCATCAACATCACCCTGCTGATCCTGATGACACCCTTCACGATCGAA
AAGCGAGACAATGCAGTCGCCATGGGGGCCATTACGCAGTTCCGAGTCAT
GGGTGGTTGCATTGGAATTTCTGTGCTGACGGCGGTGGCCAATGGTTACC
TGCAGTCTCACTTGCAGCAATGGCTCACCCCGACCGAGATGCAGTTGGTC
CTGCACTCCGCGGAAAGCCTTTCCACTCTCCCAGCGTCAGCACAAAGCCT
AGTTCGCGGGACCTTCTCGGCCAGTTACAATCTGCAGATGAAAATTTTGG
CGGGGTTCGCTGGGGGCCAGGTTCTGGCCTCGGTGCTTATGTGGCAGAGG
GAACAAATCATCGTCTAAGATCGTCTTTCGTGCTTTTCAGGGTGTTGGCG
GAGCGGGCAACTATTCTCTCTGTGCTGCCATTCTGCTGGACCTAGTCCCG
ACAGAGAAATATGCGACGTACATGAGTTCACTATCCCTGGTATACGCGAT
ATCGTTACTATTTGGACCTCTGATGGGAGGGGGTATCTCCGACTCGTCCA
CATGGCGCTGGGTGTTTCTGTTGAATGTCCCTCCGGGCGCACTGGCCGGG
ATAGGGCTCGCTCTGGTGCTGCCCAATCGGTTCCCCTATCACAATGAACC
ATCCAAGGAGAAGACAATGTCATCCGTGCTGGCGTCATTGCGGCAGATGA
TTCAGAGAGTCGACTTACTCGGCTCCAGCTTGCTGTTAGTTGCAACTATT
CTCCTCGTAACGGCTTTGGAGGAAGCCAATGAGGAATACACTTGGAATTC
GGCTTTTACCATTGTGCTGCTTATCATCTCCGGACTGGCGTGGATCGCCT
TTCTACTGTGGGAAAGACGGGTGACTCTCTATTCGAAGCACATTGAGCCG
GTCTTCCCGTGGCGGTTCGTTTGTAACCGAGTTTGGGTCGGAATGTTGTT
ATGCTAGGATATGCAGGACTGCTTGTCATCTCGGCCAAGTTCAGCGACAT
ATTTGGCCGCAAGTCATGCCTGCTGGTCGCTGTTTTTCTCTTCGTGGTGT
TTTCCGGGGCTTGCGGGGCAGCCCAAACCATGGAGCAACTAAATTCCGTC
TGTCTGGGGGCAGTGTGGTTCTCGACCATGTTCCAGTTACCCCAGCGGTT
CCAAATCGTCAACCAGCTTACGGCTTTCCAAGCGGCTGTCCGATTCATCC
CTTTCACCGTGGCAAGTCCCGTGGCATCAGTCCTGGCACCGGCTATCGGA
AAAGTGTTCAAGATTCCGCTGCTATACCTGGTAATCTTCGCGTCTTTGCT
GCAGGTGGTTGCTTACGTCCTTCTGGGCACTCTCCCCGACTCACTGTCGA
TCACCTCGGCGCAGTATGGATACCAGGTCCTGGCCGGCTTCGGGTGTGGC
ATCAACATCACCCTGCTGATCCTGATGACACCCTTCACGATCGAAAAGCG
AGACAATGCAGTCGCCATGGGGGCCATTACGCAGTTCCGAGTCATGGGTG
GTTGCATTGGAATTTCTGTGCTGACGGCGGTGGCCAATGGTTACCTGCAG
TCTCACTTGCAGCAATGGCTCACCCCGACCGAGATGCAGTTGGTCCTGCA
CTCCGCGGAAAGCCTTTCCACTCTCCCAGCGTCAGCACAAAGCCTAGTTC
GCGGGACCTTCTCGGCCAGTTACAATCTGCAGATGAAAATTTTGGCGGGG
TTCGCTGGGGGCCAGGTTCTGGCCTCGGTGCTTATGTGGCAGAGGGAACA
AATCATCGTCTAAGATCGTCTTTCGTGCTTTTCAGGGTGTTGGCGGAGCG
GGCAACTATTCTCTCTGTGCTGCCATTCTGCTGGACCTAGTCCCGACAGA
GAAATATGCGACGTACATGAGTTCACTATCCCTGGTATACGCGATATCGT
TACTATTTGGACCTCTGATGGGAGGGGGTATCTCCGACTCGTCCACATGG
CGCTGGGTGTTTCTGTTGAATGTCCCTCCGGGCGCACTGGCCGGGATAGG
GCTCGCTCTGGTGCTGCCCAATCGGTTCCCCTATCACAATGAACCATCCA
AGGAGAAGACAATGTCATCCGTGCTGGCGTCATTGCGGCAGATGATTCAG
AGAGTCGACTTACTCGGCTCCAGCTTGCTGTTAGTTGCAACTATTCTCCT
CGTAACGGCTTTGGAGGAAGCCAATGAGGAATACACTTGGAATTCGGCTT
TTACCATTGTGCTGCTTATCATCTCCGGACTGGCGTGGATCGCCTTTCTA
CTGTGGGAAAGACGGGTGACTCTCTATTCGAAGCACATTGAGCCGGTCTT
CCCGTGGCGGTTCGTTTGTAACCGAGTTTGGGTCGGAATGTTGTTATGCT
AGGATATGCAGGACTGCTTGTCATCTCGGCCAAGTTCAGCGACATATTTG
GCCGCAAGTCATGCCTGCTGGTCGCTGTTTTTCTCTTCGTGGTGTTTTCC
GGGGCTTGCGGGGCAGCCCAAACCATGGAGCAACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.22 |
| Note | SMCOG1005: EmrB/QacA |
| Note | SMCOG1005:Drug resistance transporter |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR011701 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:5011060..5012579 - |
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