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KJC3_009277-T1, KJC3_009277-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009277-T1
Unique NameKJC3_009277-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:5072433..5073474+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009277-T1 ID=KJC3_009277-T1|Name=KJC3_009277-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1042bp|location=Sequence derived from alignment at ch6:5072433..5073474+ (Aspergillus niger KJC3)
CTTAAAGCCGAACTCATTCCTGCTCGTCCATTTCACAATCGGCGAAAGCC
TAAAAATGGACCAGCAAATTGGCTATTACATCAAATTTTCATCCAAGGAT
AGACAGTGTGTACCCAAATCCCCCTCTCTCTTACCCTCTCCATTACCCGT
CCCCACCTTGTTATTCGAACCGGACTGTTCGTCAAGATCAGACACTTACT
CCCATGCCCAAGTTGTAAAACACCATGTATTCAGCTCGAGATTGAACTCT
GTCCACTTTTACAGTATACTCTCAGTCGATCAACACACGACGATGACCCA
AGGCCTTTTGTCTTCATATGGTCTCCCCTTAATAACGGGTATAGTGAAGA
TGGATTCATACTTCTACGACATACCTCAAAGGGTAAGCTTGAAAGGGTAC
ATGTACCAGATGCGACCCTAGATCCTCTAGACATGGTGCACGTGGAGTAC
CCATTTGACTTTCAGGAGCTAGAGCCAGGCGGTTCCATCACCTACTGTCA
CAGTCTTCCACGCAGGTACCGGGAGCAGCTGGAACCCGGCGAGACTTACG
AGCTGGTCTGGACCGGTACAAAGATTCCTTCGTGGGACTGGGGAGTCCTT
AGTGACTATGTGGGGTCCCGCCTGACTGCTAATCCGACACAGCCGGATTT
GATTTTACCGGGTGGTGCACGTGTTACGTTTACATATGAGCAGATAGAGT
CTCCGGCCTTCATTCGCCGGCAATCCACCCCACCATTACTGCCATCAGAC
CGCGTGTAAGTCATTTCACCCATCCAGGTGCCGGGATTCTCATCCTCAGC
AATCCGAAAGCCTTACACTTTTGTCAAATAGACAGGGCGCCCCTATATGG
CGTTATCGCTTCAAGGGTGGTACAGTGGACTGGTGGGACTACGGGGGAGT
GGACAAACATGCCGACACAAATGTCCAGATACCACCGCATCCTTGGGGGA
AGGTGACTGATCCGGCGGACAATGGGGGTCGACCTCAGCTTGTGGTACCA
GCGTCAAATGCGATTGAGTTTCGCATTGTAGAGAAGGAATAA
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Coding sequence (CDS) from alignment at ch6:5072433..5073474+

>KJC3_009277-T1 ID=KJC3_009277-T1|Name=KJC3_009277-T1|organism=Aspergillus niger KJC3|type=CDS|length=2412bp|location=Sequence derived from alignment at ch6:5072433..5073474+ (Aspergillus niger KJC3)
ATGGACCAGCAAATTGGCTATTACATCAAATTTTCATCCAAGGATAGACA
TTGTAAAACACCATGTATTCAGCTCGAGATTGAACTCTGTCCACTTTTAC
AGTATACTCTCAGTCGATCAACACACGACGATGACCCAAGGCCTTTTGTC
TTCATATGGTCTCCCCTTAATAACGGGTATAGTGAAGATGGATTCATACT
TCTACGACATACCTCAAAGGGTAAGCTTGAAAGGGTACATGTACCAGATG
CGACCCTAGATCCTCTAGACATGGTGCACGTGGAGTACCCATTTGACTTT
CAGGAGCTAGAGCCAGGCGGTTCCATCACCTACTGTCACAGTCTTCCACG
CAGGTACCGGGAGCAGCTGGAACCCGGCGAGACTTACGAGCTGGTCTGGA
CCGGTACAAAGATTCCTTCGTGGGACTGGGGAGTCCTTAGTGACTATGTG
GGGTCCCGCCTGACTGCTAATCCGACACAGCCGGATTTGATTTTACCGGG
TGGTGCACGTGTTACGTTTACATATGAGCAGATAGAGTCTCCGGCCTTCA
TTCGCCGGCAATCCACCCCACCATTACTGCCATCAGACCGCGTACAGGGC
GCCCCTATATGGCGTTATCGCTTCAAGGGTGGTACAGTGGACTGGTGGGA
CTACGGGGGAGTGGACAAACATGCCGACACAAATGTCCAGATACCACCGC
ATCCTTGGGGGAAGGTGACTGATCCGGCGGACAATGGGGGTCGACCTCAG
CTTGTGGTACCAGCGTCAAATGCGATTGAGTTTCGCATTGTAGAGAAGGA
ATAAATGGACCAGCAAATTGGCTATTACATCAAATTTTCATCCAAGGATA
GACATTGTAAAACACCATGTATTCAGCTCGAGATTGAACTCTGTCCACTT
TTACAGTATACTCTCAGTCGATCAACACACGACGATGACCCAAGGCCTTT
TGTCTTCATATGGTCTCCCCTTAATAACGGGTATAGTGAAGATGGATTCA
TACTTCTACGACATACCTCAAAGGGTAAGCTTGAAAGGGTACATGTACCA
GATGCGACCCTAGATCCTCTAGACATGGTGCACGTGGAGTACCCATTTGA
CTTTCAGGAGCTAGAGCCAGGCGGTTCCATCACCTACTGTCACAGTCTTC
CACGCAGGTACCGGGAGCAGCTGGAACCCGGCGAGACTTACGAGCTGGTC
TGGACCGGTACAAAGATTCCTTCGTGGGACTGGGGAGTCCTTAGTGACTA
TGTGGGGTCCCGCCTGACTGCTAATCCGACACAGCCGGATTTGATTTTAC
CGGGTGGTGCACGTGTTACGTTTACATATGAGCAGATAGAGTCTCCGGCC
TTCATTCGCCGGCAATCCACCCCACCATTACTGCCATCAGACCGCGTACA
GGGCGCCCCTATATGGCGTTATCGCTTCAAGGGTGGTACAGTGGACTGGT
GGGACTACGGGGGAGTGGACAAACATGCCGACACAAATGTCCAGATACCA
CCGCATCCTTGGGGGAAGGTGACTGATCCGGCGGACAATGGGGGTCGACC
TCAGCTTGTGGTACCAGCGTCAAATGCGATTGAGTTTCGCATTGTAGAGA
AGGAATAAATGGACCAGCAAATTGGCTATTACATCAAATTTTCATCCAAG
GATAGACATTGTAAAACACCATGTATTCAGCTCGAGATTGAACTCTGTCC
ACTTTTACAGTATACTCTCAGTCGATCAACACACGACGATGACCCAAGGC
CTTTTGTCTTCATATGGTCTCCCCTTAATAACGGGTATAGTGAAGATGGA
TTCATACTTCTACGACATACCTCAAAGGGTAAGCTTGAAAGGGTACATGT
ACCAGATGCGACCCTAGATCCTCTAGACATGGTGCACGTGGAGTACCCAT
TTGACTTTCAGGAGCTAGAGCCAGGCGGTTCCATCACCTACTGTCACAGT
CTTCCACGCAGGTACCGGGAGCAGCTGGAACCCGGCGAGACTTACGAGCT
GGTCTGGACCGGTACAAAGATTCCTTCGTGGGACTGGGGAGTCCTTAGTG
ACTATGTGGGGTCCCGCCTGACTGCTAATCCGACACAGCCGGATTTGATT
TTACCGGGTGGTGCACGTGTTACGTTTACATATGAGCAGATAGAGTCTCC
GGCCTTCATTCGCCGGCAATCCACCCCACCATTACTGCCATCAGACCGCG
TACAGGGCGCCCCTATATGGCGTTATCGCTTCAAGGGTGGTACAGTGGAC
TGGTGGGACTACGGGGGAGTGGACAAACATGCCGACACAAATGTCCAGAT
ACCACCGCATCCTTGGGGGAAGGTGACTGATCCGGCGGACAATGGGGGTC
GACCTCAGCTTGTGGTACCAGCGTCAAATGCGATTGAGTTTCGCATTGTA
GAGAAGGAATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009277KJC3_009277Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009277-T1.utr5p1KJC3_009277-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009277-T1.exon1KJC3_009277-T1.exon1Aspergillus niger KJC3exon
KJC3_009277-T1.exon2KJC3_009277-T1.exon2Aspergillus niger KJC3exon
KJC3_009277-T1.exon3KJC3_009277-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009277-T1.cdsKJC3_009277-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009277-T1KJC3_009277-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:5072433..5073474 +
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