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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:5090787..5092369+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009283-T1 ID=KJC3_009283-T1|Name=KJC3_009283-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1583bp|location=Sequence derived from alignment at ch6:5090787..5092369+ (Aspergillus niger KJC3)
GCAATCGCATCTGTCTACCTGTTGACCGATCATCTCATGGACAATGCCAG
CCAGCTCTACTGACATGAGTCGTAGAGGATCGCGTGAATTCAAAGCCAGG
GGACTTCCGAAAAGGTCCAAGTTGACAGAGAATATTTTCATCAAGCGCGT
GGCCCATTGGTTGTTGCGGAAACAGATAGGTATCATCCATATTCTCCTAT
TGCTGTTCCTCTCCAAAGGCCTGCCACTGACGGCGCAACACCGGGAATAG
ACATTTCATTCCAGCTGGTTGTTTTCCTCCTTCTCACACATCTTGGTGTA
CCCGCTCTACGACCATATACGTCGAAGTTCTTCAGGCTATCTTACTGTAA
CCAGAGCACCGAAAAGTATGGAATTGGATATGATGACCTCTACTTTATAG
CCTTCTGGATTATACTCCTCACGGGTCTAAGGGCCAGCTGTATGAAGTAT
ATTCTTGCTCCGCTTAGCCGACGGTGGGGAGTATCAAAAGCCAAAGATGC
CACTCGGTTTGCGGAGCAAGGATGGATATCCTTGTATTACAGCATGATGT
GGACACTAGGCATGGTATGTAGACCTTCTGTTCCCAGATATTCAGGGATA
TACGGGATTGACCTGCGACAGTACCTCTATTATAAGTCACCGTATTTCCT
CAACATGGAGGAGCTGTGGACCGAATGGCCTCAGAGGGAAATGGACGGCC
TGGTTAAAGCATATTACCTGGGACAGTTGTCTTTCTGGATTCAGCAAGTG
CTAGTGATCAACATCGAGGACCGGCGGAAAGACCATTGGCAAATGCTAAC
CCATCATTTCGTAACAATCAGCCTTATGGCAACCTCGTACGTCTATCACC
AAACCAAGGTCGGACACTTGATTCTAGTGCTCATGGACGTAATTGATCTC
TTTCTGCCAGTATGTTAGCCAAGGACCAATAACGATAAAGTGGCTGACAA
CGGGAAAAGCTAGCAAAATGTCTTAAATATCTAGGCTTCACCACAATCTG
TGATATCCTGTTTGGGCTTTTCATTGTATCGTGGCTCTTTGCGCGCCATC
TGCTATTCTTGATTACTTGTTGGAGTATCTATACTGATTTCCCCCGAATA
GTCCCACCCGGGTGCTATCGGGGAACTGCAAAAGATCTTCAGGGACCGTT
TCCAGTTCCAGAGAACTGGGGGTATTTGATCGAGCCTTTTTATGATCCAG
CAGGAACAGTGTGTATGAACAATACCATCATGTATAGCTTTCTATCATTT
CTTCTCCTGCTTCAGGTCTTGATGGTCATATGGTTCGCAATCATTGCGCG
GATCGCCATACGGGTGTTGGAGGGCAGGAGAGCAGATGATCCTCGAAGCG
ACGGTGAACAGGACGAACTAGTGGAGAAGGAACAAGGGAATAACGAAGCA
CCCCAGGGGTCGGCCAAGAATATCAGCGGAAATGCGGTAAGCCAGGACAG
GTGGCAACAACACGCCGGTGAACGCCAGCGGCGTGCTCTTCGCCAGCCCC
CAGGTTCGGGAGGAGCCGCATAATCGGAACAGACGCAATAAGCGGATTAA
CGAGCCGCTCAGTGAGCCAGGGCATTGAACAGG back to topCoding sequence (CDS) from alignment at ch6:5090787..5092369+ >KJC3_009283-T1 ID=KJC3_009283-T1|Name=KJC3_009283-T1|organism=Aspergillus niger KJC3|type=CDS|length=5208bp|location=Sequence derived from alignment at ch6:5090787..5092369+ (Aspergillus niger KJC3)
ATGCCAGCCAGCTCTACTGACATGAGTCGTAGAGGATCGCGTGAATTCAA
AGCCAGGGGACTTCCGAAAAGGTCCAAGTTGACAGAGAATATTTTCATCA
AGCGCGTGGCCCATTGGTTGTTGCGGAAACAGATAGACATTTCATTCCAG
CTGGTTGTTTTCCTCCTTCTCACACATCTTGGTGTACCCGCTCTACGACC
ATATACGTCGAAGTTCTTCAGGCTATCTTACTGTAACCAGAGCACCGAAA
AGTATGGAATTGGATATGATGACCTCTACTTTATAGCCTTCTGGATTATA
CTCCTCACGGGTCTAAGGGCCAGCTGTATGAAGTATATTCTTGCTCCGCT
TAGCCGACGGTGGGGAGTATCAAAAGCCAAAGATGCCACTCGGTTTGCGG
AGCAAGGATGGATATCCTTGTATTACAGCATGATGTGGACACTAGGCATG
TACCTCTATTATAAGTCACCGTATTTCCTCAACATGGAGGAGCTGTGGAC
CGAATGGCCTCAGAGGGAAATGGACGGCCTGGTTAAAGCATATTACCTGG
GACAGTTGTCTTTCTGGATTCAGCAAGTGCTAGTGATCAACATCGAGGAC
CGGCGGAAAGACCATTGGCAAATGCTAACCCATCATTTCGTAACAATCAG
CCTTATGGCAACCTCGTACGTCTATCACCAAACCAAGGTCGGACACTTGA
TTCTAGTGCTCATGGACGTAATTGATCTCTTTCTGCCACTAGCAAAATGT
CTTAAATATCTAGGCTTCACCACAATCTGTGATATCCTGTTTGGGCTTTT
CATTGTATCGTGGCTCTTTGCGCGCCATCTGCTATTCTTGATTACTTGTT
GGAGTATCTATACTGATTTCCCCCGAATAGTCCCACCCGGGTGCTATCGG
GGAACTGCAAAAGATCTTCAGGGACCGTTTCCAGTTCCAGAGAACTGGGG
GTATTTGATCGAGCCTTTTTATGATCCAGCAGGAACAGTGTGTATGAACA
ATACCATCATGTATAGCTTTCTATCATTTCTTCTCCTGCTTCAGGTCTTG
ATGGTCATATGGTTCGCAATCATTGCGCGGATCGCCATACGGGTGTTGGA
GGGCAGGAGAGCAGATGATCCTCGAAGCGACGGTGAACAGGACGAACTAG
TGGAGAAGGAACAAGGGAATAACGAAGCACCCCAGGGGTCGGCCAAGAAT
ATCAGCGGAAATGCGGTAAGCCAGGACAGGTGGCAACAACACGCCGGTGA
ACGCCAGCGGCGTGCTCTTCGCCAGCCCCCAGGTTCGGGAGGAGCCGCAT
AAATGCCAGCCAGCTCTACTGACATGAGTCGTAGAGGATCGCGTGAATTC
AAAGCCAGGGGACTTCCGAAAAGGTCCAAGTTGACAGAGAATATTTTCAT
CAAGCGCGTGGCCCATTGGTTGTTGCGGAAACAGATAGACATTTCATTCC
AGCTGGTTGTTTTCCTCCTTCTCACACATCTTGGTGTACCCGCTCTACGA
CCATATACGTCGAAGTTCTTCAGGCTATCTTACTGTAACCAGAGCACCGA
AAAGTATGGAATTGGATATGATGACCTCTACTTTATAGCCTTCTGGATTA
TACTCCTCACGGGTCTAAGGGCCAGCTGTATGAAGTATATTCTTGCTCCG
CTTAGCCGACGGTGGGGAGTATCAAAAGCCAAAGATGCCACTCGGTTTGC
GGAGCAAGGATGGATATCCTTGTATTACAGCATGATGTGGACACTAGGCA
TGTACCTCTATTATAAGTCACCGTATTTCCTCAACATGGAGGAGCTGTGG
ACCGAATGGCCTCAGAGGGAAATGGACGGCCTGGTTAAAGCATATTACCT
GGGACAGTTGTCTTTCTGGATTCAGCAAGTGCTAGTGATCAACATCGAGG
ACCGGCGGAAAGACCATTGGCAAATGCTAACCCATCATTTCGTAACAATC
AGCCTTATGGCAACCTCGTACGTCTATCACCAAACCAAGGTCGGACACTT
GATTCTAGTGCTCATGGACGTAATTGATCTCTTTCTGCCACTAGCAAAAT
GTCTTAAATATCTAGGCTTCACCACAATCTGTGATATCCTGTTTGGGCTT
TTCATTGTATCGTGGCTCTTTGCGCGCCATCTGCTATTCTTGATTACTTG
TTGGAGTATCTATACTGATTTCCCCCGAATAGTCCCACCCGGGTGCTATC
GGGGAACTGCAAAAGATCTTCAGGGACCGTTTCCAGTTCCAGAGAACTGG
GGGTATTTGATCGAGCCTTTTTATGATCCAGCAGGAACAGTGTGTATGAA
CAATACCATCATGTATAGCTTTCTATCATTTCTTCTCCTGCTTCAGGTCT
TGATGGTCATATGGTTCGCAATCATTGCGCGGATCGCCATACGGGTGTTG
GAGGGCAGGAGAGCAGATGATCCTCGAAGCGACGGTGAACAGGACGAACT
AGTGGAGAAGGAACAAGGGAATAACGAAGCACCCCAGGGGTCGGCCAAGA
ATATCAGCGGAAATGCGGTAAGCCAGGACAGGTGGCAACAACACGCCGGT
GAACGCCAGCGGCGTGCTCTTCGCCAGCCCCCAGGTTCGGGAGGAGCCGC
ATAAATGCCAGCCAGCTCTACTGACATGAGTCGTAGAGGATCGCGTGAAT
TCAAAGCCAGGGGACTTCCGAAAAGGTCCAAGTTGACAGAGAATATTTTC
ATCAAGCGCGTGGCCCATTGGTTGTTGCGGAAACAGATAGACATTTCATT
CCAGCTGGTTGTTTTCCTCCTTCTCACACATCTTGGTGTACCCGCTCTAC
GACCATATACGTCGAAGTTCTTCAGGCTATCTTACTGTAACCAGAGCACC
GAAAAGTATGGAATTGGATATGATGACCTCTACTTTATAGCCTTCTGGAT
TATACTCCTCACGGGTCTAAGGGCCAGCTGTATGAAGTATATTCTTGCTC
CGCTTAGCCGACGGTGGGGAGTATCAAAAGCCAAAGATGCCACTCGGTTT
GCGGAGCAAGGATGGATATCCTTGTATTACAGCATGATGTGGACACTAGG
CATGTACCTCTATTATAAGTCACCGTATTTCCTCAACATGGAGGAGCTGT
GGACCGAATGGCCTCAGAGGGAAATGGACGGCCTGGTTAAAGCATATTAC
CTGGGACAGTTGTCTTTCTGGATTCAGCAAGTGCTAGTGATCAACATCGA
GGACCGGCGGAAAGACCATTGGCAAATGCTAACCCATCATTTCGTAACAA
TCAGCCTTATGGCAACCTCGTACGTCTATCACCAAACCAAGGTCGGACAC
TTGATTCTAGTGCTCATGGACGTAATTGATCTCTTTCTGCCACTAGCAAA
ATGTCTTAAATATCTAGGCTTCACCACAATCTGTGATATCCTGTTTGGGC
TTTTCATTGTATCGTGGCTCTTTGCGCGCCATCTGCTATTCTTGATTACT
TGTTGGAGTATCTATACTGATTTCCCCCGAATAGTCCCACCCGGGTGCTA
TCGGGGAACTGCAAAAGATCTTCAGGGACCGTTTCCAGTTCCAGAGAACT
GGGGGTATTTGATCGAGCCTTTTTATGATCCAGCAGGAACAGTGTGTATG
AACAATACCATCATGTATAGCTTTCTATCATTTCTTCTCCTGCTTCAGGT
CTTGATGGTCATATGGTTCGCAATCATTGCGCGGATCGCCATACGGGTGT
TGGAGGGCAGGAGAGCAGATGATCCTCGAAGCGACGGTGAACAGGACGAA
CTAGTGGAGAAGGAACAAGGGAATAACGAAGCACCCCAGGGGTCGGCCAA
GAATATCAGCGGAAATGCGGTAAGCCAGGACAGGTGGCAACAACACGCCG
GTGAACGCCAGCGGCGTGCTCTTCGCCAGCCCCCAGGTTCGGGAGGAGCC
GCATAAATGCCAGCCAGCTCTACTGACATGAGTCGTAGAGGATCGCGTGA
ATTCAAAGCCAGGGGACTTCCGAAAAGGTCCAAGTTGACAGAGAATATTT
TCATCAAGCGCGTGGCCCATTGGTTGTTGCGGAAACAGATAGACATTTCA
TTCCAGCTGGTTGTTTTCCTCCTTCTCACACATCTTGGTGTACCCGCTCT
ACGACCATATACGTCGAAGTTCTTCAGGCTATCTTACTGTAACCAGAGCA
CCGAAAAGTATGGAATTGGATATGATGACCTCTACTTTATAGCCTTCTGG
ATTATACTCCTCACGGGTCTAAGGGCCAGCTGTATGAAGTATATTCTTGC
TCCGCTTAGCCGACGGTGGGGAGTATCAAAAGCCAAAGATGCCACTCGGT
TTGCGGAGCAAGGATGGATATCCTTGTATTACAGCATGATGTGGACACTA
GGCATGTACCTCTATTATAAGTCACCGTATTTCCTCAACATGGAGGAGCT
GTGGACCGAATGGCCTCAGAGGGAAATGGACGGCCTGGTTAAAGCATATT
ACCTGGGACAGTTGTCTTTCTGGATTCAGCAAGTGCTAGTGATCAACATC
GAGGACCGGCGGAAAGACCATTGGCAAATGCTAACCCATCATTTCGTAAC
AATCAGCCTTATGGCAACCTCGTACGTCTATCACCAAACCAAGGTCGGAC
ACTTGATTCTAGTGCTCATGGACGTAATTGATCTCTTTCTGCCACTAGCA
AAATGTCTTAAATATCTAGGCTTCACCACAATCTGTGATATCCTGTTTGG
GCTTTTCATTGTATCGTGGCTCTTTGCGCGCCATCTGCTATTCTTGATTA
CTTGTTGGAGTATCTATACTGATTTCCCCCGAATAGTCCCACCCGGGTGC
TATCGGGGAACTGCAAAAGATCTTCAGGGACCGTTTCCAGTTCCAGAGAA
CTGGGGGTATTTGATCGAGCCTTTTTATGATCCAGCAGGAACAGTGTGTA
TGAACAATACCATCATGTATAGCTTTCTATCATTTCTTCTCCTGCTTCAG
GTCTTGATGGTCATATGGTTCGCAATCATTGCGCGGATCGCCATACGGGT
GTTGGAGGGCAGGAGAGCAGATGATCCTCGAAGCGACGGTGAACAGGACG
AACTAGTGGAGAAGGAACAAGGGAATAACGAAGCACCCCAGGGGTCGGCC
AAGAATATCAGCGGAAATGCGGTAAGCCAGGACAGGTGGCAACAACACGC
CGGTGAACGCCAGCGGCGTGCTCTTCGCCAGCCCCCAGGTTCGGGAGGAG
CCGCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009283-T1.utr5p1 | KJC3_009283-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009283-T1.utr3p1 | KJC3_009283-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013599 |
| DBxref | InterPro:IPR016439 |
| DBxref | InterPro:IPR006634 |
| DBxref | PFAM:PF03798 |
| DBxref | PFAM:PF08390 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:5090787..5092369 + |
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