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KJC3_009283-T2, KJC3_009283-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009283-T2
Unique NameKJC3_009283-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:5090787..5092369+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009283-T2 ID=KJC3_009283-T2|Name=KJC3_009283-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1583bp|location=Sequence derived from alignment at ch6:5090787..5092369+ (Aspergillus niger KJC3)
GCAATCGCATCTGTCTACCTGTTGACCGATCATCTCATGGACAATGCCAG
CCAGCTCTACTGACATGAGTCGTAGAGGATCGCGTGAATTCAAAGCCAGG
GGACTTCCGAAAAGGTCCAAGTTGACAGAGAATATTTTCATCAAGCGCGT
GGCCCATTGGTTGTTGCGGAAACAGATAGGTATCATCCATATTCTCCTAT
TGCTGTTCCTCTCCAAAGGCCTGCCACTGACGGCGCAACACCGGGAATAG
ACATTTCATTCCAGCTGGTTGTTTTCCTCCTTCTCACACATCTTGGTGTA
CCCGCTCTACGACCATATACGTCGAAGTTCTTCAGGCTATCTTACTGTAA
CCAGAGCACCGAAAAGTATGGAATTGGATATGATGACCTCTACTTTATAG
CCTTCTGGATTATACTCCTCACGGGTCTAAGGGCCAGCTGTATGAAGTAT
ATTCTTGCTCCGCTTAGCCGACGGTGGGGAGTATCAAAAGCCAAAGATGC
CACTCGGTTTGCGGAGCAAGGATGGATATCCTTGTATTACAGCATGATGT
GGACACTAGGCATGGTATGTAGACCTTCTGTTCCCAGATATTCAGGGATA
TACGGGATTGACCTGCGACAGTACCTCTATTATAAGTCACCGTATTTCCT
CAACATGGAGGAGCTGTGGACCGAATGGCCTCAGAGGGAAATGGACGGCC
TGGTTAAAGCATATTACCTGGGACAGTTGTCTTTCTGGATTCAGCAAGTG
CTAGTGATCAACATCGAGGACCGGCGGAAAGACCATTGGCAAATGCTAAC
CCATCATTTCGTAACAATCAGCCTTATGGCAACCTCGTACGTCTATCACC
AAACCAAGGTCGGACACTTGATTCTAGTGCTCATGGACGTAATTGATCTC
TTTCTGCCAGTATGTTAGCCAAGGACCAATAACGATAAAGTGGCTGACAA
CGGGAAAAGCTAGCAAAATGTCTTAAATATCTAGGCTTCACCACAATCTG
TGATATCCTGTTTGGGCTTTTCATTGTATCGTGGCTCTTTGCGCGCCATC
TGCTATTCTTGATTACTTGTTGGAGTATCTATACTGATTTCCCCCGAATA
GTCCCACCCGGGTGCTATCGGGGAACTGCAAAAGATCTTCAGGGACCGTT
TCCAGTTCCAGAGAACTGGGGGTATTTGATCGAGCCTTTTTATGATCCAG
CAGGAACAGTGTGTATGAACAATACCATCATGTATAGCTTTCTATCATTT
CTTCTCCTGCTTCAGGTCTTGATGGTCATATGGTTCGCAATCATTGCGCG
GATCGCCATACGGGTGTTGGAGGGCAGGAGAGCAGATGATCCTCGAAGCG
ACGGTGAACAGGACGAACTAGTGGAGAAGGAACAAGGGAATAACGAAGCA
CCCCAGGGGTCGGCCAAGAATATCAGCGGAAATGCGGTAAGCCAGGACAG
GTGGCAACAACACGCCGGTGAACGCCAGCGGCGTGCTCTTCGCCAGCCCC
CAGGTTCGGGAGGAGCCGCATAATCGGAACAGACGCAATAAGCGGATTAA
CGAGCCGCTCAGTGAGCCAGGGCATTGAACAGG
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Coding sequence (CDS) from alignment at ch6:5090787..5092369+

>KJC3_009283-T2 ID=KJC3_009283-T2|Name=KJC3_009283-T2|organism=Aspergillus niger KJC3|type=CDS|length=2925bp|location=Sequence derived from alignment at ch6:5090787..5092369+ (Aspergillus niger KJC3)
ATGAAGTATATTCTTGCTCCGCTTAGCCGACGGTGGGGAGTATCAAAAGC
CAAAGATGCCACTCGGTTTGCGGAGCAAGGATGGATATCCTTGTATTACA
GCATGATGTGGACACTAGGCATGTACCTCTATTATAAGTCACCGTATTTC
CTCAACATGGAGGAGCTGTGGACCGAATGGCCTCAGAGGGAAATGGACGG
CCTGGTTAAAGCATATTACCTGGGACAGTTGTCTTTCTGGATTCAGCAAG
TGCTAGTGATCAACATCGAGGACCGGCGGAAAGACCATTGGCAAATGCTA
ACCCATCATTTCGTAACAATCAGCCTTATGGCAACCTCGTACGTCTATCA
CCAAACCAAGGTCGGACACTTGATTCTAGTGCTCATGGACGTAATTGATC
TCTTTCTGCCACTAGCAAAATGTCTTAAATATCTAGGCTTCACCACAATC
TGTGATATCCTGTTTGGGCTTTTCATTGTATCGTGGCTCTTTGCGCGCCA
TCTGCTATTCTTGATTACTTGTTGGAGTATCTATACTGATTTCCCCCGAA
TAGTCCCACCCGGGTGCTATCGGGGAACTGCAAAAGATCTTCAGGGACCG
TTTCCAGTTCCAGAGAACTGGGGGTATTTGATCGAGCCTTTTTATGATCC
AGCAGGAACAGTGTGTATGAACAATACCATCATGTATAGCTTTCTATCAT
TTCTTCTCCTGCTTCAGGTCTTGATGGTCATATGGTTCGCAATCATTGCG
CGGATCGCCATACGGGTGTTGGAGGGCAGGAGAGCAGATGATCCTCGAAG
CGACGGTGAACAGGACGAACTAGTGGAGAAGGAACAAGGGAATAACGAAG
CACCCCAGGGGTCGGCCAAGAATATCAGCGGAAATGCGGTAAGCCAGGAC
AGGTGGCAACAACACGCCGGTGAACGCCAGCGGCGTGCTCTTCGCCAGCC
CCCAGGTTCGGGAGGAGCCGCATAAATGAAGTATATTCTTGCTCCGCTTA
GCCGACGGTGGGGAGTATCAAAAGCCAAAGATGCCACTCGGTTTGCGGAG
CAAGGATGGATATCCTTGTATTACAGCATGATGTGGACACTAGGCATGTA
CCTCTATTATAAGTCACCGTATTTCCTCAACATGGAGGAGCTGTGGACCG
AATGGCCTCAGAGGGAAATGGACGGCCTGGTTAAAGCATATTACCTGGGA
CAGTTGTCTTTCTGGATTCAGCAAGTGCTAGTGATCAACATCGAGGACCG
GCGGAAAGACCATTGGCAAATGCTAACCCATCATTTCGTAACAATCAGCC
TTATGGCAACCTCGTACGTCTATCACCAAACCAAGGTCGGACACTTGATT
CTAGTGCTCATGGACGTAATTGATCTCTTTCTGCCACTAGCAAAATGTCT
TAAATATCTAGGCTTCACCACAATCTGTGATATCCTGTTTGGGCTTTTCA
TTGTATCGTGGCTCTTTGCGCGCCATCTGCTATTCTTGATTACTTGTTGG
AGTATCTATACTGATTTCCCCCGAATAGTCCCACCCGGGTGCTATCGGGG
AACTGCAAAAGATCTTCAGGGACCGTTTCCAGTTCCAGAGAACTGGGGGT
ATTTGATCGAGCCTTTTTATGATCCAGCAGGAACAGTGTGTATGAACAAT
ACCATCATGTATAGCTTTCTATCATTTCTTCTCCTGCTTCAGGTCTTGAT
GGTCATATGGTTCGCAATCATTGCGCGGATCGCCATACGGGTGTTGGAGG
GCAGGAGAGCAGATGATCCTCGAAGCGACGGTGAACAGGACGAACTAGTG
GAGAAGGAACAAGGGAATAACGAAGCACCCCAGGGGTCGGCCAAGAATAT
CAGCGGAAATGCGGTAAGCCAGGACAGGTGGCAACAACACGCCGGTGAAC
GCCAGCGGCGTGCTCTTCGCCAGCCCCCAGGTTCGGGAGGAGCCGCATAA
ATGAAGTATATTCTTGCTCCGCTTAGCCGACGGTGGGGAGTATCAAAAGC
CAAAGATGCCACTCGGTTTGCGGAGCAAGGATGGATATCCTTGTATTACA
GCATGATGTGGACACTAGGCATGTACCTCTATTATAAGTCACCGTATTTC
CTCAACATGGAGGAGCTGTGGACCGAATGGCCTCAGAGGGAAATGGACGG
CCTGGTTAAAGCATATTACCTGGGACAGTTGTCTTTCTGGATTCAGCAAG
TGCTAGTGATCAACATCGAGGACCGGCGGAAAGACCATTGGCAAATGCTA
ACCCATCATTTCGTAACAATCAGCCTTATGGCAACCTCGTACGTCTATCA
CCAAACCAAGGTCGGACACTTGATTCTAGTGCTCATGGACGTAATTGATC
TCTTTCTGCCACTAGCAAAATGTCTTAAATATCTAGGCTTCACCACAATC
TGTGATATCCTGTTTGGGCTTTTCATTGTATCGTGGCTCTTTGCGCGCCA
TCTGCTATTCTTGATTACTTGTTGGAGTATCTATACTGATTTCCCCCGAA
TAGTCCCACCCGGGTGCTATCGGGGAACTGCAAAAGATCTTCAGGGACCG
TTTCCAGTTCCAGAGAACTGGGGGTATTTGATCGAGCCTTTTTATGATCC
AGCAGGAACAGTGTGTATGAACAATACCATCATGTATAGCTTTCTATCAT
TTCTTCTCCTGCTTCAGGTCTTGATGGTCATATGGTTCGCAATCATTGCG
CGGATCGCCATACGGGTGTTGGAGGGCAGGAGAGCAGATGATCCTCGAAG
CGACGGTGAACAGGACGAACTAGTGGAGAAGGAACAAGGGAATAACGAAG
CACCCCAGGGGTCGGCCAAGAATATCAGCGGAAATGCGGTAAGCCAGGAC
AGGTGGCAACAACACGCCGGTGAACGCCAGCGGCGTGCTCTTCGCCAGCC
CCCAGGTTCGGGAGGAGCCGCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009283KJC3_009283Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009283-T2KJC3_009283-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009283-T2.utr5p1KJC3_009283-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009283-T2.exon1KJC3_009283-T2.exon1Aspergillus niger KJC3exon
KJC3_009283-T2.exon2KJC3_009283-T2.exon2Aspergillus niger KJC3exon
KJC3_009283-T2.exon3KJC3_009283-T2.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009283-T2.cdsKJC3_009283-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009283-T2.utr3p1KJC3_009283-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016439
DBxrefInterPro:IPR006634
DBxrefPFAM:PF03798
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:5090787..5092369 +
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