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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:59611..61428+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009300-T1 ID=KJC3_009300-T1|Name=KJC3_009300-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1818bp|location=Sequence derived from alignment at ch7:59611..61428+ (Aspergillus niger KJC3)
AGTCCACCTAACGGCATACTCAGCATACTCGATGCTGGGAATCACTTCAG
GTATGGTCGGCTGAATATGCAGTCGATTTCCGGCGCCAGGAACAGTCCGG
TCCCCTCACCACGGACATAGACCCGCCACCAAAACGTCGATAGCGGCCTC
GCTTCGTCAACGACCATTTTGCCCACCCCTGACACCCAGGAAAGACGGCT
TCCGGTAACAATATAAAAGGGCGAGTCTTGTCCTCTTACTTTCCGTCTTT
CGAGTATGCCTTGCCAGTTCCTAACTTGACTTGAGACCTCCCATTTCGTT
CATTTGTCGCCCGCTATAAGAATGGCCCGTCAGCTTATCCTGATCAGCAG
TCTGCTGGCAGCTGTTGCTGTGCGCGCGGCGCCTGCCGATCCGGCTCATC
CCATGGTTACGGAAGCGCCTGACGTCAATTTGGTTGAAAAGAGAGCGACT
ACTTGCACCTTCTCGGGCTCCGAAGGTGCATCCAAGGCCAGCAAGTCGAA
AACCTCTTGCTCCACAATCTACCTGTCCGACGTGGCCGTCCCATCTGGCA
CAACCCTTGATCTCTCTGACCTGAATGATGGAACCCACGTACGTTCCCCG
GGTGATTCATGTCTTATTCTCACCCCCAAACGCGTCAATGGTACCGGCTG
ACAGATGTACTAGGTGATCTTCCAGGGAGAAACCACTTTTGGCTACGAGG
AATGGGAAGGGCCTCTTGTGCGTGTTTCTGGGACTGATATCACGGTTGAG
GGGGAGAGCGACGCGGTGCTCAATGGCGATGGCAGCCGCTGGTGGGATGG
AGAGGGTGGCAATGGTGGTAAAACAAAGCCCAAATTCTTCTATGCCCATG
ACTTGACCTCTTCCACCATCAAGAGCATCTACATCGAGAACTCTCCTGTG
CAGGTGTTCAGCATCGATGGCTCCACTGATCTTACCATGACTGATATCAC
GGTGGATAACACGGATGGTGACACGGACGACCTCGCCGCCAATACGGATG
GCTTCGACATCGGGGAAAGTACCTATATCACGATCACAGGTGCCGAAATC
TACAACCAAGATGACTGCGTTGCCATCAATTCTGGAGAGGTATGCGTCCC
CTGGGCACTGGTTGAGAGGGGAGACGCATTGCTGACCATCCCGTAGAACA
TTTATTTCAGTGCCAGTGTGTGTTCTGGTGGCCACGGCCTGTCCATTGGC
TCTGTTGGTGGTCGGGATGATAACACTGTCAAGAACGTGACGTTTTATGA
TGTCAATGTTCTCAAGTCCCAGCAAGGTAAGGGAACGCATTTGAGCCTTC
CGTTTGCCGTCGTCTAACGTGTGCTTTAGCAATCCGTATCAAGACCATCT
ACGGCGACACTGGCTCCGTCAGCGAAGTCACTTACCATGAGATTGCCTTT
TCGGACGCTACTGATTACGGCATTGTTATTGAGCAGAACTATGATGACAC
CTCCAAGACCCCCACTACCGGGGTACCGATCACGGATTTTGTGCTCGAGA
ACATCATTGGAACGTGTGCAGATGATGATTGTACCGAAGTATACATTGCC
TGCGGTGATGGCAGCTGTTCGGACTGGACTTGGACCGGCGTGAGCGTGAC
CGGCGGCAGTGTCAGTGACGACTGCCTTAATGTTCCCTCCGGAATTAGCT
GCGATTTGTAGGCCGTTGTGATTGGGAGAGATGTTCCCGGGTACTCTGGT
GATTCGTTTAGCCAGCCCTTTCTGTTGAGTGGCCTGTTCTTCTATACTGT
CGATTGTGTGTGAGATTACTACCTTGCCCGAGGAAAGAGCAGTTCATCCT
ATCGTTTATTCTTTGCCG back to topCoding sequence (CDS) from alignment at ch7:59611..61428+ >KJC3_009300-T1 ID=KJC3_009300-T1|Name=KJC3_009300-T1|organism=Aspergillus niger KJC3|type=CDS|length=4620bp|location=Sequence derived from alignment at ch7:59611..61428+ (Aspergillus niger KJC3)
ATGGCCCGTCAGCTTATCCTGATCAGCAGTCTGCTGGCAGCTGTTGCTGT
GCGCGCGGCGCCTGCCGATCCGGCTCATCCCATGGTTACGGAAGCGCCTG
ACGTCAATTTGGTTGAAAAGAGAGCGACTACTTGCACCTTCTCGGGCTCC
GAAGGTGCATCCAAGGCCAGCAAGTCGAAAACCTCTTGCTCCACAATCTA
CCTGTCCGACGTGGCCGTCCCATCTGGCACAACCCTTGATCTCTCTGACC
TGAATGATGGAACCCACGTGATCTTCCAGGGAGAAACCACTTTTGGCTAC
GAGGAATGGGAAGGGCCTCTTGTGCGTGTTTCTGGGACTGATATCACGGT
TGAGGGGGAGAGCGACGCGGTGCTCAATGGCGATGGCAGCCGCTGGTGGG
ATGGAGAGGGTGGCAATGGTGGTAAAACAAAGCCCAAATTCTTCTATGCC
CATGACTTGACCTCTTCCACCATCAAGAGCATCTACATCGAGAACTCTCC
TGTGCAGGTGTTCAGCATCGATGGCTCCACTGATCTTACCATGACTGATA
TCACGGTGGATAACACGGATGGTGACACGGACGACCTCGCCGCCAATACG
GATGGCTTCGACATCGGGGAAAGTACCTATATCACGATCACAGGTGCCGA
AATCTACAACCAAGATGACTGCGTTGCCATCAATTCTGGAGAGAACATTT
ATTTCAGTGCCAGTGTGTGTTCTGGTGGCCACGGCCTGTCCATTGGCTCT
GTTGGTGGTCGGGATGATAACACTGTCAAGAACGTGACGTTTTATGATGT
CAATGTTCTCAAGTCCCAGCAAGCAATCCGTATCAAGACCATCTACGGCG
ACACTGGCTCCGTCAGCGAAGTCACTTACCATGAGATTGCCTTTTCGGAC
GCTACTGATTACGGCATTGTTATTGAGCAGAACTATGATGACACCTCCAA
GACCCCCACTACCGGGGTACCGATCACGGATTTTGTGCTCGAGAACATCA
TTGGAACGTGTGCAGATGATGATTGTACCGAAGTATACATTGCCTGCGGT
GATGGCAGCTGTTCGGACTGGACTTGGACCGGCGTGAGCGTGACCGGCGG
CAGTGTCAGTGACGACTGCCTTAATGTTCCCTCCGGAATTAGCTGCGATT
TGTAGATGGCCCGTCAGCTTATCCTGATCAGCAGTCTGCTGGCAGCTGTT
GCTGTGCGCGCGGCGCCTGCCGATCCGGCTCATCCCATGGTTACGGAAGC
GCCTGACGTCAATTTGGTTGAAAAGAGAGCGACTACTTGCACCTTCTCGG
GCTCCGAAGGTGCATCCAAGGCCAGCAAGTCGAAAACCTCTTGCTCCACA
ATCTACCTGTCCGACGTGGCCGTCCCATCTGGCACAACCCTTGATCTCTC
TGACCTGAATGATGGAACCCACGTGATCTTCCAGGGAGAAACCACTTTTG
GCTACGAGGAATGGGAAGGGCCTCTTGTGCGTGTTTCTGGGACTGATATC
ACGGTTGAGGGGGAGAGCGACGCGGTGCTCAATGGCGATGGCAGCCGCTG
GTGGGATGGAGAGGGTGGCAATGGTGGTAAAACAAAGCCCAAATTCTTCT
ATGCCCATGACTTGACCTCTTCCACCATCAAGAGCATCTACATCGAGAAC
TCTCCTGTGCAGGTGTTCAGCATCGATGGCTCCACTGATCTTACCATGAC
TGATATCACGGTGGATAACACGGATGGTGACACGGACGACCTCGCCGCCA
ATACGGATGGCTTCGACATCGGGGAAAGTACCTATATCACGATCACAGGT
GCCGAAATCTACAACCAAGATGACTGCGTTGCCATCAATTCTGGAGAGAA
CATTTATTTCAGTGCCAGTGTGTGTTCTGGTGGCCACGGCCTGTCCATTG
GCTCTGTTGGTGGTCGGGATGATAACACTGTCAAGAACGTGACGTTTTAT
GATGTCAATGTTCTCAAGTCCCAGCAAGCAATCCGTATCAAGACCATCTA
CGGCGACACTGGCTCCGTCAGCGAAGTCACTTACCATGAGATTGCCTTTT
CGGACGCTACTGATTACGGCATTGTTATTGAGCAGAACTATGATGACACC
TCCAAGACCCCCACTACCGGGGTACCGATCACGGATTTTGTGCTCGAGAA
CATCATTGGAACGTGTGCAGATGATGATTGTACCGAAGTATACATTGCCT
GCGGTGATGGCAGCTGTTCGGACTGGACTTGGACCGGCGTGAGCGTGACC
GGCGGCAGTGTCAGTGACGACTGCCTTAATGTTCCCTCCGGAATTAGCTG
CGATTTGTAGATGGCCCGTCAGCTTATCCTGATCAGCAGTCTGCTGGCAG
CTGTTGCTGTGCGCGCGGCGCCTGCCGATCCGGCTCATCCCATGGTTACG
GAAGCGCCTGACGTCAATTTGGTTGAAAAGAGAGCGACTACTTGCACCTT
CTCGGGCTCCGAAGGTGCATCCAAGGCCAGCAAGTCGAAAACCTCTTGCT
CCACAATCTACCTGTCCGACGTGGCCGTCCCATCTGGCACAACCCTTGAT
CTCTCTGACCTGAATGATGGAACCCACGTGATCTTCCAGGGAGAAACCAC
TTTTGGCTACGAGGAATGGGAAGGGCCTCTTGTGCGTGTTTCTGGGACTG
ATATCACGGTTGAGGGGGAGAGCGACGCGGTGCTCAATGGCGATGGCAGC
CGCTGGTGGGATGGAGAGGGTGGCAATGGTGGTAAAACAAAGCCCAAATT
CTTCTATGCCCATGACTTGACCTCTTCCACCATCAAGAGCATCTACATCG
AGAACTCTCCTGTGCAGGTGTTCAGCATCGATGGCTCCACTGATCTTACC
ATGACTGATATCACGGTGGATAACACGGATGGTGACACGGACGACCTCGC
CGCCAATACGGATGGCTTCGACATCGGGGAAAGTACCTATATCACGATCA
CAGGTGCCGAAATCTACAACCAAGATGACTGCGTTGCCATCAATTCTGGA
GAGAACATTTATTTCAGTGCCAGTGTGTGTTCTGGTGGCCACGGCCTGTC
CATTGGCTCTGTTGGTGGTCGGGATGATAACACTGTCAAGAACGTGACGT
TTTATGATGTCAATGTTCTCAAGTCCCAGCAAGCAATCCGTATCAAGACC
ATCTACGGCGACACTGGCTCCGTCAGCGAAGTCACTTACCATGAGATTGC
CTTTTCGGACGCTACTGATTACGGCATTGTTATTGAGCAGAACTATGATG
ACACCTCCAAGACCCCCACTACCGGGGTACCGATCACGGATTTTGTGCTC
GAGAACATCATTGGAACGTGTGCAGATGATGATTGTACCGAAGTATACAT
TGCCTGCGGTGATGGCAGCTGTTCGGACTGGACTTGGACCGGCGTGAGCG
TGACCGGCGGCAGTGTCAGTGACGACTGCCTTAATGTTCCCTCCGGAATT
AGCTGCGATTTGTAGATGGCCCGTCAGCTTATCCTGATCAGCAGTCTGCT
GGCAGCTGTTGCTGTGCGCGCGGCGCCTGCCGATCCGGCTCATCCCATGG
TTACGGAAGCGCCTGACGTCAATTTGGTTGAAAAGAGAGCGACTACTTGC
ACCTTCTCGGGCTCCGAAGGTGCATCCAAGGCCAGCAAGTCGAAAACCTC
TTGCTCCACAATCTACCTGTCCGACGTGGCCGTCCCATCTGGCACAACCC
TTGATCTCTCTGACCTGAATGATGGAACCCACGTGATCTTCCAGGGAGAA
ACCACTTTTGGCTACGAGGAATGGGAAGGGCCTCTTGTGCGTGTTTCTGG
GACTGATATCACGGTTGAGGGGGAGAGCGACGCGGTGCTCAATGGCGATG
GCAGCCGCTGGTGGGATGGAGAGGGTGGCAATGGTGGTAAAACAAAGCCC
AAATTCTTCTATGCCCATGACTTGACCTCTTCCACCATCAAGAGCATCTA
CATCGAGAACTCTCCTGTGCAGGTGTTCAGCATCGATGGCTCCACTGATC
TTACCATGACTGATATCACGGTGGATAACACGGATGGTGACACGGACGAC
CTCGCCGCCAATACGGATGGCTTCGACATCGGGGAAAGTACCTATATCAC
GATCACAGGTGCCGAAATCTACAACCAAGATGACTGCGTTGCCATCAATT
CTGGAGAGAACATTTATTTCAGTGCCAGTGTGTGTTCTGGTGGCCACGGC
CTGTCCATTGGCTCTGTTGGTGGTCGGGATGATAACACTGTCAAGAACGT
GACGTTTTATGATGTCAATGTTCTCAAGTCCCAGCAAGCAATCCGTATCA
AGACCATCTACGGCGACACTGGCTCCGTCAGCGAAGTCACTTACCATGAG
ATTGCCTTTTCGGACGCTACTGATTACGGCATTGTTATTGAGCAGAACTA
TGATGACACCTCCAAGACCCCCACTACCGGGGTACCGATCACGGATTTTG
TGCTCGAGAACATCATTGGAACGTGTGCAGATGATGATTGTACCGAAGTA
TACATTGCCTGCGGTGATGGCAGCTGTTCGGACTGGACTTGGACCGGCGT
GAGCGTGACCGGCGGCAGTGTCAGTGACGACTGCCTTAATGTTCCCTCCG
GAATTAGCTGCGATTTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009300-T1.utr5p1 | KJC3_009300-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009300-T1.utr3p1 | KJC3_009300-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR000743 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR006626 |
| DBxref | PFAM:PF00295 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:59611..61428 + |
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