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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:92685..94850+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009316-T2 ID=KJC3_009316-T2|Name=KJC3_009316-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2166bp|location=Sequence derived from alignment at ch7:92685..94850+ (Aspergillus niger KJC3)
GTAGTCTGACAGTATAAGTGATGGGTAGACCCTAGATTCATCCATCCAGC
AGCACAGATTGATCGTTCTCTATGGCGTCCACTACGGGGTGCGAATCCAT
CTCACTTACCGAACTCGGGGAGCGGCCAATCCCGATGGTGCCAGAAGGCC
CCAACAATGATGCTTCGGTTACCGAGGCTGAGGCCAAAGTCCCTTACTTG
AAGCTCATCGCATCGGGCTTCTCCTTCTTCGTCGCAGGTGTCAACGACGG
TAGTCTGGGCTCCTTGCTTCCCTACGTCCTCGAGACGTATCACGTTAGTA
CCGGCCTGGTAATTATCGTGTATGTCCTCCCCCCAATGGAGCCCAAACGC
ACCATCCCACGGTCAACCCAATCACTGATGGCTTTGCTAGTTATGTTACA
ACTCTTGTTGGCTGGCTTGTGGCCGCCCTGACCAATAGCACCGCCTGCCA
ATACCTCGGTTTAGGTGCCATGCTCGCTCTGGGGGCTGCGCTACAGGTGC
TGGCCCATGTCCTGCGTGTCTGGCTTCCGCCGTTCCCATTGTACGCCATA
ACTTTCTTCCTAGCGAGTCTAGGACAGGCATTTAATGACACCCACGCCAA
TACATATGTCGCTGCAGTCAAGGCCGCCCATCGATGGCTCGGCTTTATCC
ATGCCATGTACATGGCCGGATGTCTGGTGGGCCCCTTAGTGGCCACCGCT
GTGGCATCTGCTAATCGGCAGTCTCAGTGGAATTTGTTCTACATCTTCCC
ACTGGGGCTGGGGCTAATCAACCTGATATTGATATTGATAGCCTTCCGTG
ACAGCATGTCCGTCCAACATTCCTCAGAAGCCCCCCAAAGCGACGACCCG
CAGCCTTCAAGCCAGGACGCTCGGAGTACGCGCGCAGTAAGGGAGATCAA
GGACACACTTCGCGTCCCAGCTGTCTGGCTGACAAGTCTCTACTTTTTCT
TTTTCCTGGGAGCGGCCATCACGGCCGGTGGTAGGTGAAATCACATCTCA
CAGGCCGAAAGGAAACTCACAACGAGATAGGATGGATTGTCGAGTACCTT
GTTCGCGTTCGGCATGGTGATGTGCACCAGATGGGCTATATCCCGACTGG
GTTCTATGGCGGAGCTTTCCTTGGTCGACTGGTCCTTGCTGAGCCTACTT
ATCGTCTAGGAGAGCGTCGCATGATATTTATCTACGCTGCTCTGTGTGCC
GGGTTGGAGCTGGTATTTTGGCTGTTAGTTCACCCAATGTTGCTTTAGAC
TCTCATCGACTGACGAATAGCATAGGGTGCCCAATATTGGTGTGGAAGCT
ATGGCTATTTGCTTGTTGGGATTCTTTTCCGGGCCATTCTTTGCAACGGT
GGGCTCTGTCGTATTTCACTATGGATCCAATTGCCTGACTTCTTAATAGG
GAATATCCGTCGCATCCAAGATCTTTCCGGCTAACATTCGCTCCTCCGGC
ATTGGTACGTGAAATTTACCACGATCTAACAAGCAACGTGTTAATAGTAT
TTTTCAGCATTTGTCTTCGTGCTGGGGCAGATTGGCGGATCGCTCTTCCC
CGTATTGACGGGAATCATCTCTTCCCACACCGGCGTCAAGGCCCTGCAGC
CCATGTTATTGGCTCTGCTGTGTGCCACGGGCATCAGCTGGCTGTTGGTG
CCCAAGGCGCCGAGGCTGCGTGCAGACTGATCGACAAACCAGAAAGCAAC
TGTGGTTTCCGGATACAGTTCACATCTATTGAACCTGCTCTACGCTTTAT
GTGATCTTACGTCGCTTAGGTAGAAACATTCATCCGATTGCACTGGCATT
CTCCTAAGTAGCATAAATGGAAGTACTGATCAATAGGTTTTTGAAACTGT
GCTTGCAGCAGCTATTCCACCAGCTAGACCTTCCTGCTACAGCCACTTTA
TGTGGCCGGACAAGCCCTTGACGATGCTAGTGAGGGACGCAGTCTTTCTT
GGAATCCTTAAGCAGATAGACCACGATCTTAACGCTTATACCCACCATCG
CCAGCGAGATTCAAATGAGGAGTGGGAGGTCTTTTACAGAACAGTCAAGA
GAGATGGTGTCTTCTAGATATATAGCAAATAGCGCTTTATAAGGCATGTC
TGTTGAAGGTGGGCTGATCAGCCCGTACTGGGAATGGCTACGGCGTCAAA
GACGTGGAGTAAATGG back to topCoding sequence (CDS) from alignment at ch7:92685..94850+ >KJC3_009316-T2 ID=KJC3_009316-T2|Name=KJC3_009316-T2|organism=Aspergillus niger KJC3|type=CDS|length=7992bp|location=Sequence derived from alignment at ch7:92685..94850+ (Aspergillus niger KJC3)
ATGGCGTCCACTACGGGGTGCGAATCCATCTCACTTACCGAACTCGGGGA
GCGGCCAATCCCGATGGTGCCAGAAGGCCCCAACAATGATGCTTCGGTTA
CCGAGGCTGAGGCCAAAGTCCCTTACTTGAAGCTCATCGCATCGGGCTTC
TCCTTCTTCGTCGCAGGTGTCAACGACGGTAGTCTGGGCTCCTTGCTTCC
CTACGTCCTCGAGACGTATCACGTTAGTACCGGCCTGGTAATTATCGTTT
ATGTTACAACTCTTGTTGGCTGGCTTGTGGCCGCCCTGACCAATAGCACC
GCCTGCCAATACCTCGGTTTAGGTGCCATGCTCGCTCTGGGGGCTGCGCT
ACAGGTGCTGGCCCATGTCCTGCGTGTCTGGCTTCCGCCGTTCCCATTGT
ACGCCATAACTTTCTTCCTAGCGAGTCTAGGACAGGCATTTAATGACACC
CACGCCAATACATATGTCGCTGCAGTCAAGGCCGCCCATCGATGGCTCGG
CTTTATCCATGCCATGTACATGGCCGGATGTCTGGTGGGCCCCTTAGTGG
CCACCGCTGTGGCATCTGCTAATCGGCAGTCTCAGTGGAATTTGTTCTAC
ATCTTCCCACTGGGGCTGGGGCTAATCAACCTGATATTGATATTGATAGC
CTTCCGTGACAGCATGTCCGTCCAACATTCCTCAGAAGCCCCCCAAAGCG
ACGACCCGCAGCCTTCAAGCCAGGACGCTCGGAGTACGCGCGCAGTAAGG
GAGATCAAGGACACACTTCGCGTCCCAGCTGTCTGGCTGACAAGTCTCTA
CTTTTTCTTTTTCCTGGGAGCGGCCATCACGGCCGGTGGATGGATTGTCG
AGTACCTTGTTCGCGTTCGGCATGGTGATGTGCACCAGATGGGCTATATC
CCGACTGGGTTCTATGGCGGAGCTTTCCTTGGTCGACTGGTCCTTGCTGA
GCCTACTTATCGTCTAGGAGAGCGTCGCATGATATTTATCTACGCTGCTC
TGTGTGCCGGGTTGGAGCTGGTATTTTGGCTGGTGCCCAATATTGGTGTG
GAAGCTATGGCTATTTGCTTGTTGGGATTCTTTTCCGGGCCATTCTTTGC
AACGGGAATATCCGTCGCATCCAAGATCTTTCCGGCTAACATTCGCTCCT
CCGGCATTGCATTTGTCTTCGTGCTGGGGCAGATTGGCGGATCGCTCTTC
CCCGTATTGACGGGAATCATCTCTTCCCACACCGGCGTCAAGGCCCTGCA
GCCCATGTTATTGGCTCTGCTGTGTGCCACGGGCATCAGCTGGCTGTTGG
TGCCCAAGGCGCCGAGGCTGCGTGCAGACTGAATGGCGTCCACTACGGGG
TGCGAATCCATCTCACTTACCGAACTCGGGGAGCGGCCAATCCCGATGGT
GCCAGAAGGCCCCAACAATGATGCTTCGGTTACCGAGGCTGAGGCCAAAG
TCCCTTACTTGAAGCTCATCGCATCGGGCTTCTCCTTCTTCGTCGCAGGT
GTCAACGACGGTAGTCTGGGCTCCTTGCTTCCCTACGTCCTCGAGACGTA
TCACGTTAGTACCGGCCTGGTAATTATCGTTTATGTTACAACTCTTGTTG
GCTGGCTTGTGGCCGCCCTGACCAATAGCACCGCCTGCCAATACCTCGGT
TTAGGTGCCATGCTCGCTCTGGGGGCTGCGCTACAGGTGCTGGCCCATGT
CCTGCGTGTCTGGCTTCCGCCGTTCCCATTGTACGCCATAACTTTCTTCC
TAGCGAGTCTAGGACAGGCATTTAATGACACCCACGCCAATACATATGTC
GCTGCAGTCAAGGCCGCCCATCGATGGCTCGGCTTTATCCATGCCATGTA
CATGGCCGGATGTCTGGTGGGCCCCTTAGTGGCCACCGCTGTGGCATCTG
CTAATCGGCAGTCTCAGTGGAATTTGTTCTACATCTTCCCACTGGGGCTG
GGGCTAATCAACCTGATATTGATATTGATAGCCTTCCGTGACAGCATGTC
CGTCCAACATTCCTCAGAAGCCCCCCAAAGCGACGACCCGCAGCCTTCAA
GCCAGGACGCTCGGAGTACGCGCGCAGTAAGGGAGATCAAGGACACACTT
CGCGTCCCAGCTGTCTGGCTGACAAGTCTCTACTTTTTCTTTTTCCTGGG
AGCGGCCATCACGGCCGGTGGATGGATTGTCGAGTACCTTGTTCGCGTTC
GGCATGGTGATGTGCACCAGATGGGCTATATCCCGACTGGGTTCTATGGC
GGAGCTTTCCTTGGTCGACTGGTCCTTGCTGAGCCTACTTATCGTCTAGG
AGAGCGTCGCATGATATTTATCTACGCTGCTCTGTGTGCCGGGTTGGAGC
TGGTATTTTGGCTGGTGCCCAATATTGGTGTGGAAGCTATGGCTATTTGC
TTGTTGGGATTCTTTTCCGGGCCATTCTTTGCAACGGGAATATCCGTCGC
ATCCAAGATCTTTCCGGCTAACATTCGCTCCTCCGGCATTGCATTTGTCT
TCGTGCTGGGGCAGATTGGCGGATCGCTCTTCCCCGTATTGACGGGAATC
ATCTCTTCCCACACCGGCGTCAAGGCCCTGCAGCCCATGTTATTGGCTCT
GCTGTGTGCCACGGGCATCAGCTGGCTGTTGGTGCCCAAGGCGCCGAGGC
TGCGTGCAGACTGAATGGCGTCCACTACGGGGTGCGAATCCATCTCACTT
ACCGAACTCGGGGAGCGGCCAATCCCGATGGTGCCAGAAGGCCCCAACAA
TGATGCTTCGGTTACCGAGGCTGAGGCCAAAGTCCCTTACTTGAAGCTCA
TCGCATCGGGCTTCTCCTTCTTCGTCGCAGGTGTCAACGACGGTAGTCTG
GGCTCCTTGCTTCCCTACGTCCTCGAGACGTATCACGTTAGTACCGGCCT
GGTAATTATCGTTTATGTTACAACTCTTGTTGGCTGGCTTGTGGCCGCCC
TGACCAATAGCACCGCCTGCCAATACCTCGGTTTAGGTGCCATGCTCGCT
CTGGGGGCTGCGCTACAGGTGCTGGCCCATGTCCTGCGTGTCTGGCTTCC
GCCGTTCCCATTGTACGCCATAACTTTCTTCCTAGCGAGTCTAGGACAGG
CATTTAATGACACCCACGCCAATACATATGTCGCTGCAGTCAAGGCCGCC
CATCGATGGCTCGGCTTTATCCATGCCATGTACATGGCCGGATGTCTGGT
GGGCCCCTTAGTGGCCACCGCTGTGGCATCTGCTAATCGGCAGTCTCAGT
GGAATTTGTTCTACATCTTCCCACTGGGGCTGGGGCTAATCAACCTGATA
TTGATATTGATAGCCTTCCGTGACAGCATGTCCGTCCAACATTCCTCAGA
AGCCCCCCAAAGCGACGACCCGCAGCCTTCAAGCCAGGACGCTCGGAGTA
CGCGCGCAGTAAGGGAGATCAAGGACACACTTCGCGTCCCAGCTGTCTGG
CTGACAAGTCTCTACTTTTTCTTTTTCCTGGGAGCGGCCATCACGGCCGG
TGGATGGATTGTCGAGTACCTTGTTCGCGTTCGGCATGGTGATGTGCACC
AGATGGGCTATATCCCGACTGGGTTCTATGGCGGAGCTTTCCTTGGTCGA
CTGGTCCTTGCTGAGCCTACTTATCGTCTAGGAGAGCGTCGCATGATATT
TATCTACGCTGCTCTGTGTGCCGGGTTGGAGCTGGTATTTTGGCTGGTGC
CCAATATTGGTGTGGAAGCTATGGCTATTTGCTTGTTGGGATTCTTTTCC
GGGCCATTCTTTGCAACGGGAATATCCGTCGCATCCAAGATCTTTCCGGC
TAACATTCGCTCCTCCGGCATTGCATTTGTCTTCGTGCTGGGGCAGATTG
GCGGATCGCTCTTCCCCGTATTGACGGGAATCATCTCTTCCCACACCGGC
GTCAAGGCCCTGCAGCCCATGTTATTGGCTCTGCTGTGTGCCACGGGCAT
CAGCTGGCTGTTGGTGCCCAAGGCGCCGAGGCTGCGTGCAGACTGAATGG
CGTCCACTACGGGGTGCGAATCCATCTCACTTACCGAACTCGGGGAGCGG
CCAATCCCGATGGTGCCAGAAGGCCCCAACAATGATGCTTCGGTTACCGA
GGCTGAGGCCAAAGTCCCTTACTTGAAGCTCATCGCATCGGGCTTCTCCT
TCTTCGTCGCAGGTGTCAACGACGGTAGTCTGGGCTCCTTGCTTCCCTAC
GTCCTCGAGACGTATCACGTTAGTACCGGCCTGGTAATTATCGTTTATGT
TACAACTCTTGTTGGCTGGCTTGTGGCCGCCCTGACCAATAGCACCGCCT
GCCAATACCTCGGTTTAGGTGCCATGCTCGCTCTGGGGGCTGCGCTACAG
GTGCTGGCCCATGTCCTGCGTGTCTGGCTTCCGCCGTTCCCATTGTACGC
CATAACTTTCTTCCTAGCGAGTCTAGGACAGGCATTTAATGACACCCACG
CCAATACATATGTCGCTGCAGTCAAGGCCGCCCATCGATGGCTCGGCTTT
ATCCATGCCATGTACATGGCCGGATGTCTGGTGGGCCCCTTAGTGGCCAC
CGCTGTGGCATCTGCTAATCGGCAGTCTCAGTGGAATTTGTTCTACATCT
TCCCACTGGGGCTGGGGCTAATCAACCTGATATTGATATTGATAGCCTTC
CGTGACAGCATGTCCGTCCAACATTCCTCAGAAGCCCCCCAAAGCGACGA
CCCGCAGCCTTCAAGCCAGGACGCTCGGAGTACGCGCGCAGTAAGGGAGA
TCAAGGACACACTTCGCGTCCCAGCTGTCTGGCTGACAAGTCTCTACTTT
TTCTTTTTCCTGGGAGCGGCCATCACGGCCGGTGGATGGATTGTCGAGTA
CCTTGTTCGCGTTCGGCATGGTGATGTGCACCAGATGGGCTATATCCCGA
CTGGGTTCTATGGCGGAGCTTTCCTTGGTCGACTGGTCCTTGCTGAGCCT
ACTTATCGTCTAGGAGAGCGTCGCATGATATTTATCTACGCTGCTCTGTG
TGCCGGGTTGGAGCTGGTATTTTGGCTGGTGCCCAATATTGGTGTGGAAG
CTATGGCTATTTGCTTGTTGGGATTCTTTTCCGGGCCATTCTTTGCAACG
GGAATATCCGTCGCATCCAAGATCTTTCCGGCTAACATTCGCTCCTCCGG
CATTGCATTTGTCTTCGTGCTGGGGCAGATTGGCGGATCGCTCTTCCCCG
TATTGACGGGAATCATCTCTTCCCACACCGGCGTCAAGGCCCTGCAGCCC
ATGTTATTGGCTCTGCTGTGTGCCACGGGCATCAGCTGGCTGTTGGTGCC
CAAGGCGCCGAGGCTGCGTGCAGACTGAATGGCGTCCACTACGGGGTGCG
AATCCATCTCACTTACCGAACTCGGGGAGCGGCCAATCCCGATGGTGCCA
GAAGGCCCCAACAATGATGCTTCGGTTACCGAGGCTGAGGCCAAAGTCCC
TTACTTGAAGCTCATCGCATCGGGCTTCTCCTTCTTCGTCGCAGGTGTCA
ACGACGGTAGTCTGGGCTCCTTGCTTCCCTACGTCCTCGAGACGTATCAC
GTTAGTACCGGCCTGGTAATTATCGTTTATGTTACAACTCTTGTTGGCTG
GCTTGTGGCCGCCCTGACCAATAGCACCGCCTGCCAATACCTCGGTTTAG
GTGCCATGCTCGCTCTGGGGGCTGCGCTACAGGTGCTGGCCCATGTCCTG
CGTGTCTGGCTTCCGCCGTTCCCATTGTACGCCATAACTTTCTTCCTAGC
GAGTCTAGGACAGGCATTTAATGACACCCACGCCAATACATATGTCGCTG
CAGTCAAGGCCGCCCATCGATGGCTCGGCTTTATCCATGCCATGTACATG
GCCGGATGTCTGGTGGGCCCCTTAGTGGCCACCGCTGTGGCATCTGCTAA
TCGGCAGTCTCAGTGGAATTTGTTCTACATCTTCCCACTGGGGCTGGGGC
TAATCAACCTGATATTGATATTGATAGCCTTCCGTGACAGCATGTCCGTC
CAACATTCCTCAGAAGCCCCCCAAAGCGACGACCCGCAGCCTTCAAGCCA
GGACGCTCGGAGTACGCGCGCAGTAAGGGAGATCAAGGACACACTTCGCG
TCCCAGCTGTCTGGCTGACAAGTCTCTACTTTTTCTTTTTCCTGGGAGCG
GCCATCACGGCCGGTGGATGGATTGTCGAGTACCTTGTTCGCGTTCGGCA
TGGTGATGTGCACCAGATGGGCTATATCCCGACTGGGTTCTATGGCGGAG
CTTTCCTTGGTCGACTGGTCCTTGCTGAGCCTACTTATCGTCTAGGAGAG
CGTCGCATGATATTTATCTACGCTGCTCTGTGTGCCGGGTTGGAGCTGGT
ATTTTGGCTGGTGCCCAATATTGGTGTGGAAGCTATGGCTATTTGCTTGT
TGGGATTCTTTTCCGGGCCATTCTTTGCAACGGGAATATCCGTCGCATCC
AAGATCTTTCCGGCTAACATTCGCTCCTCCGGCATTGCATTTGTCTTCGT
GCTGGGGCAGATTGGCGGATCGCTCTTCCCCGTATTGACGGGAATCATCT
CTTCCCACACCGGCGTCAAGGCCCTGCAGCCCATGTTATTGGCTCTGCTG
TGTGCCACGGGCATCAGCTGGCTGTTGGTGCCCAAGGCGCCGAGGCTGCG
TGCAGACTGAATGGCGTCCACTACGGGGTGCGAATCCATCTCACTTACCG
AACTCGGGGAGCGGCCAATCCCGATGGTGCCAGAAGGCCCCAACAATGAT
GCTTCGGTTACCGAGGCTGAGGCCAAAGTCCCTTACTTGAAGCTCATCGC
ATCGGGCTTCTCCTTCTTCGTCGCAGGTGTCAACGACGGTAGTCTGGGCT
CCTTGCTTCCCTACGTCCTCGAGACGTATCACGTTAGTACCGGCCTGGTA
ATTATCGTTTATGTTACAACTCTTGTTGGCTGGCTTGTGGCCGCCCTGAC
CAATAGCACCGCCTGCCAATACCTCGGTTTAGGTGCCATGCTCGCTCTGG
GGGCTGCGCTACAGGTGCTGGCCCATGTCCTGCGTGTCTGGCTTCCGCCG
TTCCCATTGTACGCCATAACTTTCTTCCTAGCGAGTCTAGGACAGGCATT
TAATGACACCCACGCCAATACATATGTCGCTGCAGTCAAGGCCGCCCATC
GATGGCTCGGCTTTATCCATGCCATGTACATGGCCGGATGTCTGGTGGGC
CCCTTAGTGGCCACCGCTGTGGCATCTGCTAATCGGCAGTCTCAGTGGAA
TTTGTTCTACATCTTCCCACTGGGGCTGGGGCTAATCAACCTGATATTGA
TATTGATAGCCTTCCGTGACAGCATGTCCGTCCAACATTCCTCAGAAGCC
CCCCAAAGCGACGACCCGCAGCCTTCAAGCCAGGACGCTCGGAGTACGCG
CGCAGTAAGGGAGATCAAGGACACACTTCGCGTCCCAGCTGTCTGGCTGA
CAAGTCTCTACTTTTTCTTTTTCCTGGGAGCGGCCATCACGGCCGGTGGA
TGGATTGTCGAGTACCTTGTTCGCGTTCGGCATGGTGATGTGCACCAGAT
GGGCTATATCCCGACTGGGTTCTATGGCGGAGCTTTCCTTGGTCGACTGG
TCCTTGCTGAGCCTACTTATCGTCTAGGAGAGCGTCGCATGATATTTATC
TACGCTGCTCTGTGTGCCGGGTTGGAGCTGGTATTTTGGCTGGTGCCCAA
TATTGGTGTGGAAGCTATGGCTATTTGCTTGTTGGGATTCTTTTCCGGGC
CATTCTTTGCAACGGGAATATCCGTCGCATCCAAGATCTTTCCGGCTAAC
ATTCGCTCCTCCGGCATTGCATTTGTCTTCGTGCTGGGGCAGATTGGCGG
ATCGCTCTTCCCCGTATTGACGGGAATCATCTCTTCCCACACCGGCGTCA
AGGCCCTGCAGCCCATGTTATTGGCTCTGCTGTGTGCCACGGGCATCAGC
TGGCTGTTGGTGCCCAAGGCGCCGAGGCTGCGTGCAGACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009316-T2.utr5p1 | KJC3_009316-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:92685..94850 + |
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