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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:143419..145228+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009338-T1 ID=KJC3_009338-T1|Name=KJC3_009338-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1810bp|location=Sequence derived from alignment at ch7:143419..145228+ (Aspergillus niger KJC3)
ATGCTCAAGTCCAAGACACCGTATTTTGGCCTTCGAGGGGGGTGGTTAAC
CTTTTGGATCACTCTAGCTTGTGGTGCTGACATGACTTTGTATGGATATG
ATCAGGTCAGTAACTGGTCCCGATTCCTGGGATGCATGACTGATCCCAAT
ACAGGGAGTTTTCAGCGGAGTGGTGATATCCCAGGATTTTCTTCAATTAC
ACAATCTTGAAGGTCCCTCTAAGACCAGTCTTCTTGGCACTGTCACCGCG
ATCTACGATGTTGGCTGCTTCCTCGGATCCATCTGTGCATACTGGCTTGG
TGAGCGGTTGGGGCGTCGGAAGACGGTTCTCGTTGGAACGACTGTCATGG
CAATCGGTGCAGTGTTGCAAGCATCCTCATACAGTGTGGGCCAAATGATG
ACAGGTCGAGTCATTGCTGGAATTGGCAACGGTATCTCCTCTTTCATAGG
TAGAGGAGCATGAACGCTGACCATCTTTATCACCCAGGACTGAACACATC
GACTGCGCCCATTTGGCAAGTTGAGACCTCAAATGTGCATTGGCGAGGGA
AGTTGGTTATCCTCGAGAATGTCCTTGTCCTTGTAGGGTTTTCACTTGCC
AATTGGCTCAATTACGGACTGTCGTTCGCCAGTGGCCCTGTTTCCTGGCG
CTTTCCCCTGTCGTTCCAATTCATCTTCATCATAGTACTCGCTTTCACAG
TTCCATGGCTGCCTGAGTCCCCCAGGTATGTTAAATATGTTCTTTAGTGG
TGTGTGCTTACATTCCTAGGTGGCTTATTGCCCACGGCCAAGAAGAAACG
GCCGTCCAGATCATCGCAGACCTGGAGAACAAGGCCACAAACGACCCCTT
CGTTCAATTCCAAACCAGCGAGATCCAATACAGTGTGAAATATGAACGAG
AAAACAGTGTCAAGTTCAGTGACATACTGCGGGGACGCGCCCATGAACGT
TCAGGCACAAAAACCATCCGCAGGCTTATCCTCGGCATGGGAGCTCAAAC
GATGCAACAGTTCTCGGGCATCAATGTCTCATCCTACTATCTTCCTACAG
TTTTGACTAAATCTGTCGGTATGAGTGAGTCGTTAGCGAGACTCTTAACT
GCTTGCAATAGTGTTCAGTACTTATGTTTTTCGATGATCGGTATCCCGAA
TGTTGAGCGATGGGGCCGTCGAGCCCTTTTAATGTTTGGTGCCACGGGCC
AATGTCTCTGCTATATCTTCATCACTGCTCTTATTCGGTATAACGAGATG
CCCGGCTACTCACATCAACATGAAGTGGCGTCTGCATCTGTTGCTTTCTT
CTTCTTGTACTATGTATTCTTTGGTATTGGCATGCAAGGAGTGCCATGGT
GTATGTTTAAAACCTACTATATTCCGACTAAACTGCAGACTGTCCACTAA
TGATCAATACAGTATACCCTACAGAGATCAACTCCCTCACTATGCGGACC
AAGGGCGCCGCACTCGGAGCAGCTACGAACTGGATTTTCAATTTCATGGT
CGTCGAAATCACACCCATTGGAATACAGAACCTTGGTTGGCGGTTCTATG
CGATTTGGATTGCATTGAATGCAGCAATGGTCCCTGTCATTTACGTCTTT
TATCCAGAGACAGCAGGGCGCACCTTGGAGGACATGGATGAGTACTATCG
TGGGAATCCTCCACTCTTTGTCTGCTTCGATAGAGAAGCAATTTCTCGCA
AACGTCCAGAGAGATACCAGATTCGAGATGAGCATGTTATTCGGGCTAAG
GAAGGTGATGTGATTGAATTGGCACAGCATGTGGAGAATGCGACCGCTGT
GACGGCTTAA back to topCoding sequence (CDS) from alignment at ch7:143419..145228+ >KJC3_009338-T1 ID=KJC3_009338-T1|Name=KJC3_009338-T1|organism=Aspergillus niger KJC3|type=CDS|length=7995bp|location=Sequence derived from alignment at ch7:143419..145228+ (Aspergillus niger KJC3)
ATGCTCAAGTCCAAGACACCGTATTTTGGCCTTCGAGGGGGGTGGTTAAC
CTTTTGGATCACTCTAGCTTGTGGTGCTGACATGACTTTGTATGGATATG
ATCAGGGAGTTTTCAGCGGAGTGGTGATATCCCAGGATTTTCTTCAATTA
CACAATCTTGAAGGTCCCTCTAAGACCAGTCTTCTTGGCACTGTCACCGC
GATCTACGATGTTGGCTGCTTCCTCGGATCCATCTGTGCATACTGGCTTG
GTGAGCGGTTGGGGCGTCGGAAGACGGTTCTCGTTGGAACGACTGTCATG
GCAATCGGTGCAGTGTTGCAAGCATCCTCATACAGTGTGGGCCAAATGAT
GACAGGTCGAGTCATTGCTGGAATTGGCAACGGACTGAACACATCGACTG
CGCCCATTTGGCAAGTTGAGACCTCAAATGTGCATTGGCGAGGGAAGTTG
GTTATCCTCGAGAATGTCCTTGTCCTTGTAGGGTTTTCACTTGCCAATTG
GCTCAATTACGGACTGTCGTTCGCCAGTGGCCCTGTTTCCTGGCGCTTTC
CCCTGTCGTTCCAATTCATCTTCATCATAGTACTCGCTTTCACAGTTCCA
TGGCTGCCTGAGTCCCCCAGGTGGCTTATTGCCCACGGCCAAGAAGAAAC
GGCCGTCCAGATCATCGCAGACCTGGAGAACAAGGCCACAAACGACCCCT
TCGTTCAATTCCAAACCAGCGAGATCCAATACAGTGTGAAATATGAACGA
GAAAACAGTGTCAAGTTCAGTGACATACTGCGGGGACGCGCCCATGAACG
TTCAGGCACAAAAACCATCCGCAGGCTTATCCTCGGCATGGGAGCTCAAA
CGATGCAACAGTTCTCGGGCATCAATGTCTCATCCTACTATCTTCCTACA
GTTTTGACTAAATCTGTCGGTATGAGTGAGTCGTTAGCGAGACTCTTAAC
TGCTTGCAATAGTGTTCAGTACTTATGTTTTTCGATGATCGGTATCCCGA
ATGTTGAGCGATGGGGCCGTCGAGCCCTTTTAATGTTTGGTGCCACGGGC
CAATGTCTCTGCTATATCTTCATCACTGCTCTTATTCGGTATAACGAGAT
GCCCGGCTACTCACATCAACATGAAGTGGCGTCTGCATCTGTTGCTTTCT
TCTTCTTGTACTATGTATTCTTTGGTATTGGCATGCAAGGAGTGCCATGG
TTATACCCTACAGAGATCAACTCCCTCACTATGCGGACCAAGGGCGCCGC
ACTCGGAGCAGCTACGAACTGGATTTTCAATTTCATGGTCGTCGAAATCA
CACCCATTGGAATACAGAACCTTGGTTGGCGGTTCTATGCGATTTGGATT
GCATTGAATGCAGCAATGGTCCCTGTCATTTACGTCTTTTATCCAGAGAC
AGCAGGGCGCACCTTGGAGGACATGGATGAGTACTATCGTGGGAATCCTC
CACTCTTTGTCTGCTTCGATAGAGAAGCAATTTCTCGCAAACGTCCAGAG
AGATACCAGATTCGAGATGAGCATGTTATTCGGGCTAAGGAAGGTGATGT
GATTGAATTGGCACAGCATGTGGAGAATGCGACCGCTGTGACGGCTTAAA
TGCTCAAGTCCAAGACACCGTATTTTGGCCTTCGAGGGGGGTGGTTAACC
TTTTGGATCACTCTAGCTTGTGGTGCTGACATGACTTTGTATGGATATGA
TCAGGGAGTTTTCAGCGGAGTGGTGATATCCCAGGATTTTCTTCAATTAC
ACAATCTTGAAGGTCCCTCTAAGACCAGTCTTCTTGGCACTGTCACCGCG
ATCTACGATGTTGGCTGCTTCCTCGGATCCATCTGTGCATACTGGCTTGG
TGAGCGGTTGGGGCGTCGGAAGACGGTTCTCGTTGGAACGACTGTCATGG
CAATCGGTGCAGTGTTGCAAGCATCCTCATACAGTGTGGGCCAAATGATG
ACAGGTCGAGTCATTGCTGGAATTGGCAACGGACTGAACACATCGACTGC
GCCCATTTGGCAAGTTGAGACCTCAAATGTGCATTGGCGAGGGAAGTTGG
TTATCCTCGAGAATGTCCTTGTCCTTGTAGGGTTTTCACTTGCCAATTGG
CTCAATTACGGACTGTCGTTCGCCAGTGGCCCTGTTTCCTGGCGCTTTCC
CCTGTCGTTCCAATTCATCTTCATCATAGTACTCGCTTTCACAGTTCCAT
GGCTGCCTGAGTCCCCCAGGTGGCTTATTGCCCACGGCCAAGAAGAAACG
GCCGTCCAGATCATCGCAGACCTGGAGAACAAGGCCACAAACGACCCCTT
CGTTCAATTCCAAACCAGCGAGATCCAATACAGTGTGAAATATGAACGAG
AAAACAGTGTCAAGTTCAGTGACATACTGCGGGGACGCGCCCATGAACGT
TCAGGCACAAAAACCATCCGCAGGCTTATCCTCGGCATGGGAGCTCAAAC
GATGCAACAGTTCTCGGGCATCAATGTCTCATCCTACTATCTTCCTACAG
TTTTGACTAAATCTGTCGGTATGAGTGAGTCGTTAGCGAGACTCTTAACT
GCTTGCAATAGTGTTCAGTACTTATGTTTTTCGATGATCGGTATCCCGAA
TGTTGAGCGATGGGGCCGTCGAGCCCTTTTAATGTTTGGTGCCACGGGCC
AATGTCTCTGCTATATCTTCATCACTGCTCTTATTCGGTATAACGAGATG
CCCGGCTACTCACATCAACATGAAGTGGCGTCTGCATCTGTTGCTTTCTT
CTTCTTGTACTATGTATTCTTTGGTATTGGCATGCAAGGAGTGCCATGGT
TATACCCTACAGAGATCAACTCCCTCACTATGCGGACCAAGGGCGCCGCA
CTCGGAGCAGCTACGAACTGGATTTTCAATTTCATGGTCGTCGAAATCAC
ACCCATTGGAATACAGAACCTTGGTTGGCGGTTCTATGCGATTTGGATTG
CATTGAATGCAGCAATGGTCCCTGTCATTTACGTCTTTTATCCAGAGACA
GCAGGGCGCACCTTGGAGGACATGGATGAGTACTATCGTGGGAATCCTCC
ACTCTTTGTCTGCTTCGATAGAGAAGCAATTTCTCGCAAACGTCCAGAGA
GATACCAGATTCGAGATGAGCATGTTATTCGGGCTAAGGAAGGTGATGTG
ATTGAATTGGCACAGCATGTGGAGAATGCGACCGCTGTGACGGCTTAAAT
GCTCAAGTCCAAGACACCGTATTTTGGCCTTCGAGGGGGGTGGTTAACCT
TTTGGATCACTCTAGCTTGTGGTGCTGACATGACTTTGTATGGATATGAT
CAGGGAGTTTTCAGCGGAGTGGTGATATCCCAGGATTTTCTTCAATTACA
CAATCTTGAAGGTCCCTCTAAGACCAGTCTTCTTGGCACTGTCACCGCGA
TCTACGATGTTGGCTGCTTCCTCGGATCCATCTGTGCATACTGGCTTGGT
GAGCGGTTGGGGCGTCGGAAGACGGTTCTCGTTGGAACGACTGTCATGGC
AATCGGTGCAGTGTTGCAAGCATCCTCATACAGTGTGGGCCAAATGATGA
CAGGTCGAGTCATTGCTGGAATTGGCAACGGACTGAACACATCGACTGCG
CCCATTTGGCAAGTTGAGACCTCAAATGTGCATTGGCGAGGGAAGTTGGT
TATCCTCGAGAATGTCCTTGTCCTTGTAGGGTTTTCACTTGCCAATTGGC
TCAATTACGGACTGTCGTTCGCCAGTGGCCCTGTTTCCTGGCGCTTTCCC
CTGTCGTTCCAATTCATCTTCATCATAGTACTCGCTTTCACAGTTCCATG
GCTGCCTGAGTCCCCCAGGTGGCTTATTGCCCACGGCCAAGAAGAAACGG
CCGTCCAGATCATCGCAGACCTGGAGAACAAGGCCACAAACGACCCCTTC
GTTCAATTCCAAACCAGCGAGATCCAATACAGTGTGAAATATGAACGAGA
AAACAGTGTCAAGTTCAGTGACATACTGCGGGGACGCGCCCATGAACGTT
CAGGCACAAAAACCATCCGCAGGCTTATCCTCGGCATGGGAGCTCAAACG
ATGCAACAGTTCTCGGGCATCAATGTCTCATCCTACTATCTTCCTACAGT
TTTGACTAAATCTGTCGGTATGAGTGAGTCGTTAGCGAGACTCTTAACTG
CTTGCAATAGTGTTCAGTACTTATGTTTTTCGATGATCGGTATCCCGAAT
GTTGAGCGATGGGGCCGTCGAGCCCTTTTAATGTTTGGTGCCACGGGCCA
ATGTCTCTGCTATATCTTCATCACTGCTCTTATTCGGTATAACGAGATGC
CCGGCTACTCACATCAACATGAAGTGGCGTCTGCATCTGTTGCTTTCTTC
TTCTTGTACTATGTATTCTTTGGTATTGGCATGCAAGGAGTGCCATGGTT
ATACCCTACAGAGATCAACTCCCTCACTATGCGGACCAAGGGCGCCGCAC
TCGGAGCAGCTACGAACTGGATTTTCAATTTCATGGTCGTCGAAATCACA
CCCATTGGAATACAGAACCTTGGTTGGCGGTTCTATGCGATTTGGATTGC
ATTGAATGCAGCAATGGTCCCTGTCATTTACGTCTTTTATCCAGAGACAG
CAGGGCGCACCTTGGAGGACATGGATGAGTACTATCGTGGGAATCCTCCA
CTCTTTGTCTGCTTCGATAGAGAAGCAATTTCTCGCAAACGTCCAGAGAG
ATACCAGATTCGAGATGAGCATGTTATTCGGGCTAAGGAAGGTGATGTGA
TTGAATTGGCACAGCATGTGGAGAATGCGACCGCTGTGACGGCTTAAATG
CTCAAGTCCAAGACACCGTATTTTGGCCTTCGAGGGGGGTGGTTAACCTT
TTGGATCACTCTAGCTTGTGGTGCTGACATGACTTTGTATGGATATGATC
AGGGAGTTTTCAGCGGAGTGGTGATATCCCAGGATTTTCTTCAATTACAC
AATCTTGAAGGTCCCTCTAAGACCAGTCTTCTTGGCACTGTCACCGCGAT
CTACGATGTTGGCTGCTTCCTCGGATCCATCTGTGCATACTGGCTTGGTG
AGCGGTTGGGGCGTCGGAAGACGGTTCTCGTTGGAACGACTGTCATGGCA
ATCGGTGCAGTGTTGCAAGCATCCTCATACAGTGTGGGCCAAATGATGAC
AGGTCGAGTCATTGCTGGAATTGGCAACGGACTGAACACATCGACTGCGC
CCATTTGGCAAGTTGAGACCTCAAATGTGCATTGGCGAGGGAAGTTGGTT
ATCCTCGAGAATGTCCTTGTCCTTGTAGGGTTTTCACTTGCCAATTGGCT
CAATTACGGACTGTCGTTCGCCAGTGGCCCTGTTTCCTGGCGCTTTCCCC
TGTCGTTCCAATTCATCTTCATCATAGTACTCGCTTTCACAGTTCCATGG
CTGCCTGAGTCCCCCAGGTGGCTTATTGCCCACGGCCAAGAAGAAACGGC
CGTCCAGATCATCGCAGACCTGGAGAACAAGGCCACAAACGACCCCTTCG
TTCAATTCCAAACCAGCGAGATCCAATACAGTGTGAAATATGAACGAGAA
AACAGTGTCAAGTTCAGTGACATACTGCGGGGACGCGCCCATGAACGTTC
AGGCACAAAAACCATCCGCAGGCTTATCCTCGGCATGGGAGCTCAAACGA
TGCAACAGTTCTCGGGCATCAATGTCTCATCCTACTATCTTCCTACAGTT
TTGACTAAATCTGTCGGTATGAGTGAGTCGTTAGCGAGACTCTTAACTGC
TTGCAATAGTGTTCAGTACTTATGTTTTTCGATGATCGGTATCCCGAATG
TTGAGCGATGGGGCCGTCGAGCCCTTTTAATGTTTGGTGCCACGGGCCAA
TGTCTCTGCTATATCTTCATCACTGCTCTTATTCGGTATAACGAGATGCC
CGGCTACTCACATCAACATGAAGTGGCGTCTGCATCTGTTGCTTTCTTCT
TCTTGTACTATGTATTCTTTGGTATTGGCATGCAAGGAGTGCCATGGTTA
TACCCTACAGAGATCAACTCCCTCACTATGCGGACCAAGGGCGCCGCACT
CGGAGCAGCTACGAACTGGATTTTCAATTTCATGGTCGTCGAAATCACAC
CCATTGGAATACAGAACCTTGGTTGGCGGTTCTATGCGATTTGGATTGCA
TTGAATGCAGCAATGGTCCCTGTCATTTACGTCTTTTATCCAGAGACAGC
AGGGCGCACCTTGGAGGACATGGATGAGTACTATCGTGGGAATCCTCCAC
TCTTTGTCTGCTTCGATAGAGAAGCAATTTCTCGCAAACGTCCAGAGAGA
TACCAGATTCGAGATGAGCATGTTATTCGGGCTAAGGAAGGTGATGTGAT
TGAATTGGCACAGCATGTGGAGAATGCGACCGCTGTGACGGCTTAAATGC
TCAAGTCCAAGACACCGTATTTTGGCCTTCGAGGGGGGTGGTTAACCTTT
TGGATCACTCTAGCTTGTGGTGCTGACATGACTTTGTATGGATATGATCA
GGGAGTTTTCAGCGGAGTGGTGATATCCCAGGATTTTCTTCAATTACACA
ATCTTGAAGGTCCCTCTAAGACCAGTCTTCTTGGCACTGTCACCGCGATC
TACGATGTTGGCTGCTTCCTCGGATCCATCTGTGCATACTGGCTTGGTGA
GCGGTTGGGGCGTCGGAAGACGGTTCTCGTTGGAACGACTGTCATGGCAA
TCGGTGCAGTGTTGCAAGCATCCTCATACAGTGTGGGCCAAATGATGACA
GGTCGAGTCATTGCTGGAATTGGCAACGGACTGAACACATCGACTGCGCC
CATTTGGCAAGTTGAGACCTCAAATGTGCATTGGCGAGGGAAGTTGGTTA
TCCTCGAGAATGTCCTTGTCCTTGTAGGGTTTTCACTTGCCAATTGGCTC
AATTACGGACTGTCGTTCGCCAGTGGCCCTGTTTCCTGGCGCTTTCCCCT
GTCGTTCCAATTCATCTTCATCATAGTACTCGCTTTCACAGTTCCATGGC
TGCCTGAGTCCCCCAGGTGGCTTATTGCCCACGGCCAAGAAGAAACGGCC
GTCCAGATCATCGCAGACCTGGAGAACAAGGCCACAAACGACCCCTTCGT
TCAATTCCAAACCAGCGAGATCCAATACAGTGTGAAATATGAACGAGAAA
ACAGTGTCAAGTTCAGTGACATACTGCGGGGACGCGCCCATGAACGTTCA
GGCACAAAAACCATCCGCAGGCTTATCCTCGGCATGGGAGCTCAAACGAT
GCAACAGTTCTCGGGCATCAATGTCTCATCCTACTATCTTCCTACAGTTT
TGACTAAATCTGTCGGTATGAGTGAGTCGTTAGCGAGACTCTTAACTGCT
TGCAATAGTGTTCAGTACTTATGTTTTTCGATGATCGGTATCCCGAATGT
TGAGCGATGGGGCCGTCGAGCCCTTTTAATGTTTGGTGCCACGGGCCAAT
GTCTCTGCTATATCTTCATCACTGCTCTTATTCGGTATAACGAGATGCCC
GGCTACTCACATCAACATGAAGTGGCGTCTGCATCTGTTGCTTTCTTCTT
CTTGTACTATGTATTCTTTGGTATTGGCATGCAAGGAGTGCCATGGTTAT
ACCCTACAGAGATCAACTCCCTCACTATGCGGACCAAGGGCGCCGCACTC
GGAGCAGCTACGAACTGGATTTTCAATTTCATGGTCGTCGAAATCACACC
CATTGGAATACAGAACCTTGGTTGGCGGTTCTATGCGATTTGGATTGCAT
TGAATGCAGCAATGGTCCCTGTCATTTACGTCTTTTATCCAGAGACAGCA
GGGCGCACCTTGGAGGACATGGATGAGTACTATCGTGGGAATCCTCCACT
CTTTGTCTGCTTCGATAGAGAAGCAATTTCTCGCAAACGTCCAGAGAGAT
ACCAGATTCGAGATGAGCATGTTATTCGGGCTAAGGAAGGTGATGTGATT
GAATTGGCACAGCATGTGGAGAATGCGACCGCTGTGACGGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:143419..145228 + |
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