|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:163999..166111- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009348-T1 ID=KJC3_009348-T1|Name=KJC3_009348-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2113bp|location=Sequence derived from alignment at ch7:163999..166111- (Aspergillus niger KJC3)
ATGGTGCGCGCTACCCAACTGGCTGTGGCGGCCCTGGGGCTGCTTGGTGC
AGCGGCCGCTCAACTGGTGTCAACAGGCATGTCTGTCACGCTCGACCAGA
TCGATTACTTCGTCTCTCCATACCCAGCGGGAAATGTGACGGTGTCCGCG
GCCTCCCTGACAGATATCCCCAGTGTCAACGGCTTCTATCCCGTGACTGT
TGTTCAAGAGGAGACGGCTGGGGTATCATCACTGTCATCTCTTTTCTCTA
CGTGGACGGATGTGGATGATGTGTTTACGCCCGCCTTCCTGGGTGCGGTC
TTGGTCCGTGGCTACAAACCCGACAATGTCACTGCAACCTTTTTCAACAG
TTCGCGCTCCAGCGTTCTCAGCCCGTTAGAGTCCAGGGTTGTTCCGTCAG
GCCCATACTTCCTCGAACAGGCCACTGGAAATCTCTATCCGGTCTACCGG
CTCTACAGCGACTATGCAGGCGCCTTCACACAGCCACTACTACAAAAGCC
AGATGGCACATTCCAGCCGTTGTCGGCACAAGTGGCCGGTTTGGTCTCAT
CCACTATCGGTGTGCCCTCTCGCATCTACTATACCCCAAGCGATGAGAAA
CCGCTGGCCGGTGCTCGTGTTGGCGTTAAGGACATTTACAGTCTCGCTGG
CGTGCGGCAGAGCAATGGAAACCGGGCATGGTACAATCTTTACGGAGAGA
ACAATGTCACTGGCACTGCCGTATCGCGCCTGATTGATGCAGGCGCCATC
ATTGTCGGACTGCAGAAGCCCTCACAGTTTGCGAACGGAGAAACGGCTAC
AGCTGACTGGGTCGACCTTCACTCGCCCTTCAACCCACGTGGAGATGGCT
ACCAGGACCCTTCTTCCTCCTCGTCAGGCGCGGGGGCTTCCATCGGCTCT
TACGAATGGCTGGACCTGGCTCTGGGTAGTGACACCGGCGGCTCTATCCG
CAATCCCGCAGAAGTCCAGGGAGTCTACGGTTCCCGTCCATCCCACGGTC
TCGTTGAACTTGACCATGTCATGTCCATGTCGCCTGTGTTGGACACTGCG
GGAGTGCTGACAAGGGATCCTTATCTTTGGGACCGGGCCAACCAAGCCTT
GTATAGCACCAACTACACCTCGTTCCATGGCAAATCAGTCCGCTACCCCA
GCAAGCTGTACACCATCGACTTCCCAACAACTAATGACTCTGCGGCAGAC
GCTCTGCTGGCTGGATTTCAAAAGCGCCTGGCCGCGTTCTTGAATACGAC
AACCACCCCGCTGGATCTATCTGACGACTGGTCGTCGCATCCGCCATCCA
GCGCTCCCGCCAATGTCTCGCTTGAGACTTTGCTTAACCTGACCTACCCA
ATGCTGATCACCAAGCAGCAGATCCCTCTAGTTAGGGATCCTTTCTACGC
CGACTATGCTGGTACGTCTGGCCTAAGCCTTCCATATACAGCATCCGACT
GACATATACACAGCTAAACACGACGGCCGAGTCCCCTTCGTCGACCCCGT
TCCTCTCTCCCGGTGGAACTGGTCCATGGCGTACCCTGACTCTGCACTGG
ATGAAGCCATCCACAACAAGACGCTCTTCATGGACTGGATCGCGGAGAAT
TATCTCACTCCGATCTCCGATCCTGAGCAGTGCTCCTCGTCACTTATTGT
CTACGTGGGCACCGATGGCTCCCAGAGAGCGCGTAATGTCTATCGTTCGC
TCCCCGGCGCACCCTCGGGCTACAGCAAATTCCTCATCTCCAATATGGCG
AGTGTGCCGGACTTTGTCATTCCTGTGGGAGAGATTGAGGCCTACAGCAC
CATCACGCAGCACCAGGAGAAGTTTCCTGTCGCCATTGATGTTTTGGCTG
CTAAGGGGTGTGACGGATTGCTAGTCAGGCTGGCTCAGGATTTATTCGAG
GCTGGCATTATTAATGCACCGTTGGCGGGTGGGACGCTGACTGGTGGGCC
AGTCTTATCTTGATGCATAATGCTTCCCTTCAGAGGTAATACTTCGAGGA
CGGCTATGAAGCGTATGCCACATACGATTGGTATTTGACGATATTTGTCA
TGCTATACATGAAATTTACATATTGTATATAGTGTCATGGGTTTGAATAA
AGACATATCGATG back to topCoding sequence (CDS) from alignment at ch7:163999..166111- >KJC3_009348-T1 ID=KJC3_009348-T1|Name=KJC3_009348-T1|organism=Aspergillus niger KJC3|type=CDS|length=3822bp|location=Sequence derived from alignment at ch7:163999..166111- (Aspergillus niger KJC3)
CTAAACACGACGGCCGAGTCCCCTTCGTCGACCCCGTTCCTCTCTCCCGG
TGGAACTGGTCCATGGCGTACCCTGACTCTGCACTGGATGAAGCCATCCA
CAACAAGACGCTCTTCATGGACTGGATCGCGGAGAATTATCTCACTCCGA
TCTCCGATCCTGAGCAGTGCTCCTCGTCACTTATTGTCTACGTGGGCACC
GATGGCTCCCAGAGAGCGCGTAATGTCTATCGTTCGCTCCCCGGCGCACC
CTCGGGCTACAGCAAATTCCTCATCTCCAATATGGCGAGTGTGCCGGACT
TTGTCATTCCTGTGGGAGAGATTGAGGCCTACAGCACCATCACGCAGCAC
CAGGAGAAGTTTCCTGTCGCCATTGATGTTTTGGCTGCTAAGGGGTGTGA
CGGATTGCTAGTCAGGCTGGCTCAGGATTTATTCGAGGCTGGCATTATTA
ATGCACCGTTGGCGGGTGGGACGCTGACTGGTGGGCCAGTCTTATCTTGA
ATGGTGCGCGCTACCCAACTGGCTGTGGCGGCCCTGGGGCTGCTTGGTGC
AGCGGCCGCTCAACTGGTGTCAACAGGCATGTCTGTCACGCTCGACCAGA
TCGATTACTTCGTCTCTCCATACCCAGCGGGAAATGTGACGGTGTCCGCG
GCCTCCCTGACAGATATCCCCAGTGTCAACGGCTTCTATCCCGTGACTGT
TGTTCAAGAGGAGACGGCTGGGGTATCATCACTGTCATCTCTTTTCTCTA
CGTGGACGGATGTGGATGATGTGTTTACGCCCGCCTTCCTGGGTGCGGTC
TTGGTCCGTGGCTACAAACCCGACAATGTCACTGCAACCTTTTTCAACAG
TTCGCGCTCCAGCGTTCTCAGCCCGTTAGAGTCCAGGGTTGTTCCGTCAG
GCCCATACTTCCTCGAACAGGCCACTGGAAATCTCTATCCGGTCTACCGG
CTCTACAGCGACTATGCAGGCGCCTTCACACAGCCACTACTACAAAAGCC
AGATGGCACATTCCAGCCGTTGTCGGCACAAGTGGCCGGTTTGGTCTCAT
CCACTATCGGTGTGCCCTCTCGCATCTACTATACCCCAAGCGATGAGAAA
CCGCTGGCCGGTGCTCGTGTTGGCGTTAAGGACATTTACAGTCTCGCTGG
CGTGCGGCAGAGCAATGGAAACCGGGCATGGTACAATCTTTACGGAGAGA
ACAATGTCACTGGCACTGCCGTATCGCGCCTGATTGATGCAGGCGCCATC
ATTGTCGGACTGCAGAAGCCCTCACAGTTTGCGAACGGAGAAACGGCTAC
AGCTGACTGGGTCGACCTTCACTCGCCCTTCAACCCACGTGGAGATGGCT
ACCAGGACCCTTCTTCCTCCTCGTCAGGCGCGGGGGCTTCCATCGGCTCT
TACGAATGGCTGGACCTGGCTCTGGGTAGTGACACCGGCGGCTCTATCCG
CAATCCCGCAGAAGTCCAGGGAGTCTACGGTTCCCGTCCATCCCACGGTC
TCGTTGAACTTGACCATGTCATGTCCATGTCGCCTGTGTTGGACACTGCG
GGAGTGCTGACAAGGGATCCTTATCTTTGGGACCGGGCCAACCAAGCCTT
GTATAGCACCAACTACACCTCGTTCCATGGCAAATCAGTCCGCTACCCCA
GCAAGCTGTACACCATCGACTTCCCAACAACTAATGACTCTGCGGCAGAC
GCTCTGCTGGCTGGATTTCAAAAGCGCCTGGCCGCGTTCTTGAATACGAC
AACCACCCCGCTGGATCTATCTGACGACTGGTCGTCGCATCCGCCATCCA
GCGCTCCCGCCAATGTCTCGCTTGAGACTTTGCTTAACCTGACCTACCCA
ATGCTGATCACCAAGCAGCAGATCCCTCTAGTTAGGGATCCTTTCTACGC
CGACTATGCTGCTAAACACGACGGCCGAGTCCCCTTCGTCGACCCCGTTC
CTCTCTCCCGGTGGAACTGGTCCATGGCGTACCCTGACTCTGCACTGGAT
GAAGCCATCCACAACAAGACGCTCTTCATGGACTGGATCGCGGAGAATTA
TCTCACTCCGATCTCCGATCCTGAGCAGTGCTCCTCGTCACTTATTGTCT
ACGTGGGCACCGATGGCTCCCAGAGAGCGCGTAATGTCTATCGTTCGCTC
CCCGGCGCACCCTCGGGCTACAGCAAATTCCTCATCTCCAATATGGCGAG
TGTGCCGGACTTTGTCATTCCTGTGGGAGAGATTGAGGCCTACAGCACCA
TCACGCAGCACCAGGAGAAGTTTCCTGTCGCCATTGATGTTTTGGCTGCT
AAGGGGTGTGACGGATTGCTAGTCAGGCTGGCTCAGGATTTATTCGAGGC
TGGCATTATTAATGCACCGTTGGCGGGTGGGACGCTGACTGGTGGGCCAG
TCTTATCTTGAATGGTGCGCGCTACCCAACTGGCTGTGGCGGCCCTGGGG
CTGCTTGGTGCAGCGGCCGCTCAACTGGTGTCAACAGGCATGTCTGTCAC
GCTCGACCAGATCGATTACTTCGTCTCTCCATACCCAGCGGGAAATGTGA
CGGTGTCCGCGGCCTCCCTGACAGATATCCCCAGTGTCAACGGCTTCTAT
CCCGTGACTGTTGTTCAAGAGGAGACGGCTGGGGTATCATCACTGTCATC
TCTTTTCTCTACGTGGACGGATGTGGATGATGTGTTTACGCCCGCCTTCC
TGGGTGCGGTCTTGGTCCGTGGCTACAAACCCGACAATGTCACTGCAACC
TTTTTCAACAGTTCGCGCTCCAGCGTTCTCAGCCCGTTAGAGTCCAGGGT
TGTTCCGTCAGGCCCATACTTCCTCGAACAGGCCACTGGAAATCTCTATC
CGGTCTACCGGCTCTACAGCGACTATGCAGGCGCCTTCACACAGCCACTA
CTACAAAAGCCAGATGGCACATTCCAGCCGTTGTCGGCACAAGTGGCCGG
TTTGGTCTCATCCACTATCGGTGTGCCCTCTCGCATCTACTATACCCCAA
GCGATGAGAAACCGCTGGCCGGTGCTCGTGTTGGCGTTAAGGACATTTAC
AGTCTCGCTGGCGTGCGGCAGAGCAATGGAAACCGGGCATGGTACAATCT
TTACGGAGAGAACAATGTCACTGGCACTGCCGTATCGCGCCTGATTGATG
CAGGCGCCATCATTGTCGGACTGCAGAAGCCCTCACAGTTTGCGAACGGA
GAAACGGCTACAGCTGACTGGGTCGACCTTCACTCGCCCTTCAACCCACG
TGGAGATGGCTACCAGGACCCTTCTTCCTCCTCGTCAGGCGCGGGGGCTT
CCATCGGCTCTTACGAATGGCTGGACCTGGCTCTGGGTAGTGACACCGGC
GGCTCTATCCGCAATCCCGCAGAAGTCCAGGGAGTCTACGGTTCCCGTCC
ATCCCACGGTCTCGTTGAACTTGACCATGTCATGTCCATGTCGCCTGTGT
TGGACACTGCGGGAGTGCTGACAAGGGATCCTTATCTTTGGGACCGGGCC
AACCAAGCCTTGTATAGCACCAACTACACCTCGTTCCATGGCAAATCAGT
CCGCTACCCCAGCAAGCTGTACACCATCGACTTCCCAACAACTAATGACT
CTGCGGCAGACGCTCTGCTGGCTGGATTTCAAAAGCGCCTGGCCGCGTTC
TTGAATACGACAACCACCCCGCTGGATCTATCTGACGACTGGTCGTCGCA
TCCGCCATCCAGCGCTCCCGCCAATGTCTCGCTTGAGACTTTGCTTAACC
TGACCTACCCAATGCTGATCACCAAGCAGCAGATCCCTCTAGTTAGGGAT
CCTTTCTACGCCGACTATGCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009348-T1.utr3p1 | KJC3_009348-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| DBxref | InterPro:IPR023631 |
| DBxref | InterPro:IPR036928 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:163999..166111 - |
|
