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KJC3_009351-T1, KJC3_009351-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009351-T1
Unique NameKJC3_009351-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:171569..173209+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009351-T1 ID=KJC3_009351-T1|Name=KJC3_009351-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1641bp|location=Sequence derived from alignment at ch7:171569..173209+ (Aspergillus niger KJC3)
ATGAGCGATACAACTGCCTCAAAGCGCAAGCGGGCTCGACTAGCCTGTGA
ACCTTGTCGAGAGCGAAAGAGGAAATGTAATGGCGAATCTCCCTGCTCGA
CGTGCACCAGCTGGGGCTATGAGTGTCACTATCAGGCTCCGCGACGCGTG
AGAGGCAAACCTGCCGACCGAAGAACCAGCATGCACGACCAGAATGAACC
CATCCTCGAATCGAGTCCCCGACAGGTGGGCCGCTTCACGGAGACCCTCG
AGGCCAATTCGGGAGCGGCCTTTGTGAGAAAAATAGGCCTCAAGGTTGAC
CCAGCCAATGCACCCAAATTGAACCTCTTTGGCTGGAATGTGGGTAGGCG
CAAGTCCCCCACCGGACTCGCCCCGGTCGCAGCCTTTCCTATTGTTGAGA
TCCTCTCGTTGATGCAGATGAGAACTCTGGCCAATGTCTATTTTGCCAAG
ATAGATCCCTGCTATGGATTTATTGATTCGAATGATTTCTTCCGCCGCAT
GGACAGCCGCTGGCAGCCCAACGCGGTGGCGAGTACATATGACGGCGTTC
TGGCTGGAGTCGCCGCTCTGGGATGCCTCTTCTCAGGGACCAACATCAAC
ATCACCGAGTCTCACCTGGTCGAACTGGCGCGCTCGATCTCCGAGACTCA
TATCGGCAGTGTCCGTCCCTCACTACACCTGGTGACTATATGGACCCTGC
GTGTGGTTTACCTGCGCATGACTGCCCCGCCGTATCCATCCTGGGTGGCA
AGCTCGACCTTGATGCATTTGATTGAAGCTTCCAAGCTTCATCAGTTGTC
GGCCAATGACGACCGTGATATCGATACCCGACGGAGACTCATTGGTGTCG
CTCAACATTTGAATCTCTGGATCTCCTATGATCTGGGCCTTTCCCGAGTT
CCACTGGGTGACACGCTCGGACTGCCATCAGCGCGACCTGGCGATTTCAC
CACAGAGCTCCTCGGTCTTCTACCTGTAACCGCCAGCCTGGGTCCGGAGA
ACCAACGTCCGGATCAAGAAATTGAAGAGCTACTATATCAGACGTTGGAC
CGCACTCACACCAAGCCACCCTCTCTTCTTTGCCAATGCAATCTGGTCCT
TTGTCTTCTCCGTCGCCTCCGGTTGACTAACCTCACGGCATCGCCGACCA
CAATGACCAAAGTCCTCGATCTACTCAGACGCAGTCTAAGCGCAGCACGT
GAAATGGTGGCCGAGTGCTCTCCATGGCACCATGTGCCCAATGTGCCGTT
TCAGATGATCAGTATCATTCTCGAGATGGACACCAGCCCCGCACTCGAGC
TACTGCCGGAAGCCATGCAGACGTTGAGAGTGGTGGCCTCTACCTATGAC
ACGGAGACCATGAGAGAAGCGTACAATACAGCGTGTTTGCTGATCCTTCT
TTATGAACGGCGTAGACGCGCGGACACTAGACTGTTGAGTACAGTACTGC
AAGAATATCAGCAGTCACCTGCCACAGAGTCGCCTCTTCAACAAATGCCA
ACCTCTGATGAGGTTTCCTGGCTAGAAGGGCTGGTGGCTGATGTACCGAC
CTTGCAGGGTCTGGACTTCAGCCAGTTTTTGCAGCCGGACATGCTTCGAA
TGTCTCCCGATGCTTCTGCCTGGGGAAACAAGTCTGGATGA
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Coding sequence (CDS) from alignment at ch7:171569..173209+

>KJC3_009351-T1 ID=KJC3_009351-T1|Name=KJC3_009351-T1|organism=Aspergillus niger KJC3|type=CDS|length=1641bp|location=Sequence derived from alignment at ch7:171569..173209+ (Aspergillus niger KJC3)
ATGAGCGATACAACTGCCTCAAAGCGCAAGCGGGCTCGACTAGCCTGTGA
ACCTTGTCGAGAGCGAAAGAGGAAATGTAATGGCGAATCTCCCTGCTCGA
CGTGCACCAGCTGGGGCTATGAGTGTCACTATCAGGCTCCGCGACGCGTG
AGAGGCAAACCTGCCGACCGAAGAACCAGCATGCACGACCAGAATGAACC
CATCCTCGAATCGAGTCCCCGACAGGTGGGCCGCTTCACGGAGACCCTCG
AGGCCAATTCGGGAGCGGCCTTTGTGAGAAAAATAGGCCTCAAGGTTGAC
CCAGCCAATGCACCCAAATTGAACCTCTTTGGCTGGAATGTGGGTAGGCG
CAAGTCCCCCACCGGACTCGCCCCGGTCGCAGCCTTTCCTATTGTTGAGA
TCCTCTCGTTGATGCAGATGAGAACTCTGGCCAATGTCTATTTTGCCAAG
ATAGATCCCTGCTATGGATTTATTGATTCGAATGATTTCTTCCGCCGCAT
GGACAGCCGCTGGCAGCCCAACGCGGTGGCGAGTACATATGACGGCGTTC
TGGCTGGAGTCGCCGCTCTGGGATGCCTCTTCTCAGGGACCAACATCAAC
ATCACCGAGTCTCACCTGGTCGAACTGGCGCGCTCGATCTCCGAGACTCA
TATCGGCAGTGTCCGTCCCTCACTACACCTGGTGACTATATGGACCCTGC
GTGTGGTTTACCTGCGCATGACTGCCCCGCCGTATCCATCCTGGGTGGCA
AGCTCGACCTTGATGCATTTGATTGAAGCTTCCAAGCTTCATCAGTTGTC
GGCCAATGACGACCGTGATATCGATACCCGACGGAGACTCATTGGTGTCG
CTCAACATTTGAATCTCTGGATCTCCTATGATCTGGGCCTTTCCCGAGTT
CCACTGGGTGACACGCTCGGACTGCCATCAGCGCGACCTGGCGATTTCAC
CACAGAGCTCCTCGGTCTTCTACCTGTAACCGCCAGCCTGGGTCCGGAGA
ACCAACGTCCGGATCAAGAAATTGAAGAGCTACTATATCAGACGTTGGAC
CGCACTCACACCAAGCCACCCTCTCTTCTTTGCCAATGCAATCTGGTCCT
TTGTCTTCTCCGTCGCCTCCGGTTGACTAACCTCACGGCATCGCCGACCA
CAATGACCAAAGTCCTCGATCTACTCAGACGCAGTCTAAGCGCAGCACGT
GAAATGGTGGCCGAGTGCTCTCCATGGCACCATGTGCCCAATGTGCCGTT
TCAGATGATCAGTATCATTCTCGAGATGGACACCAGCCCCGCACTCGAGC
TACTGCCGGAAGCCATGCAGACGTTGAGAGTGGTGGCCTCTACCTATGAC
ACGGAGACCATGAGAGAAGCGTACAATACAGCGTGTTTGCTGATCCTTCT
TTATGAACGGCGTAGACGCGCGGACACTAGACTGTTGAGTACAGTACTGC
AAGAATATCAGCAGTCACCTGCCACAGAGTCGCCTCTTCAACAAATGCCA
ACCTCTGATGAGGTTTCCTGGCTAGAAGGGCTGGTGGCTGATGTACCGAC
CTTGCAGGGTCTGGACTTCAGCCAGTTTTTGCAGCCGGACATGCTTCGAA
TGTCTCCCGATGCTTCTGCCTGGGGAAACAAGTCTGGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009351KJC3_009351Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009351-T1.exon1KJC3_009351-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009351-T1.cdsKJC3_009351-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009351-T1KJC3_009351-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:171569..173209 +
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