|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:226774..228642+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009372-T1 ID=KJC3_009372-T1|Name=KJC3_009372-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1869bp|location=Sequence derived from alignment at ch7:226774..228642+ (Aspergillus niger KJC3)
ATGAACAATGCGGTCAGTCTCACCAGAAATGCTTGGTCCTGCCCCTAGGA
AGGGTTCTTCACCATGACCTTTTCTAACGCACGTGTTAGGCCCAGGAGCT
CAACCGAGAGGATTGCAACGATAATGAAAACCAAGACGCTGATGGGGCCT
CTCGGCCGGAAGGCCCGGTCCTACTACTTGGAATTTCACGGATGATGGAC
ATGGCAGAGCTTCTGAACGCACTACCACCTCGCAGAACTGCAGATCTGCT
CGTCGATCGCTGTCTGGATTCTGGGGAACCATCGCTAAGTATGAACTCAG
AACTTTACTAGCTTATGTGCAATCTTGAATGGCCTCGTGAAGGATCTAAC
AAGTCCTGTAGTTATCATTCATGCTCCGACGTTCAAAAGCGAGGTACATG
CCATTGATGAACGAGCCTAAATATAATGATCTAATGCAAGTTTCCTACAG
TACCTGAGATTCTGGGATAATCCCGCAGGAGCACCTGTCGCCTGGATCGC
ACTATTGTATTCAATCCTGTCTTGTGGGATATACATCCAACATACGGCAG
ATTCAGAAGTTTTCTCTCTAGACTTGCCAAGATCATTCTATATGTACCGT
CATAACAGTGCAGTTGCGTTGGCGAAGTCAAACTTCGCTACTCCGGGTCC
ATATAAAGTTGAAGCATCCATCTTATACCTCGGAATCGAGTATCTCCAAA
GCAATGAACAGAAAACAGGACTCCCAATGTTACTCGGTGTTGTGTCGCGA
CTAGCAATTATGATGGGATATCATCGCGATCCTCAGCTATACCATCCTCA
GATATCGAATTTCGAAGCAGAAATGCGGCGCAGGGCATGGCTTATACTCA
TCACAATCGACTCCGTACTCGCATGCCATACAGGTCTACCCAAGGTTATT
AGCCGGAGCCTAGGCGATGTGAGTCTCCCCAGAAATCTTCTGGATAGCGA
TTTTAGTCCAGAAACTACTGTTCTTCCTCCTCCGCGCCCCGCAGATGAGG
TCGCCAGCAGCATCGTATACATGTCGGCAATGGAGCAAATGCTGTCTGTT
TCCAACGAAGTCAGCGACTTGGCATCATGTCCTTCGCTTTTTCCCGAAAG
GGCTCTCGAATTGAATTTACAGCTGGAAAATACCAAGAGTCGCTTGCCCA
GCCTACTTCGGTTGCAGTCTCCAGGGGCACGAGCATCAGATGACCAGACT
GTGATCAAACAGTACTTTTTGGAAATAACATATCAACGCGCGCGATGCAT
CTTACACCGTCATTATTTGACGACCATTGATCCAGAGCCTCATGAAGGAT
TGAGATTAGTCTGCGTGGATGCAGCCCAGCAGGTTCTAACTCTCCAGTCC
GAACTGTTCCAAGTTCTGGCTAAATCACATAACCAGCAGTTAGCGTGGTT
TGGGGTATCTCGGTCAATCTCCGATTGCTTGACAGCTGCCATGGTGATAT
CTTTGGAGGTGATAACCCAATCAAGAAATGGTGGAACTGTGGGAATTACG
CCGCAGGCTGATCTCATTGAGCTGCTGAAGGCCTCCCAAATATCCTGGAG
GAGCTCACCAAGGCCATCACTGGAGACCCTGAAAGCCGCCGATATAATTG
GTACGATGTTAGACTTATTGGGATATGGCGGAGCGAGTCCCTTACCTGAT
TTACAAGGAACTCAAGAAGGGCAGCAGAACCATAGAGAAACCACAGAGAC
GCTCTTACGATCTCCAAGTATAATGCATGACATACTGACGGGAGATTATG
CGTTGGAAATGTTTGACTGGGTAAGACGTACTGCTCCATTGCACCTATTA
CGCTGACCATCACACTTCAAGGCTCTTTGGGATCATGAGATGCAATATCT
GAGTACTTTGGCAGATTAA back to topCoding sequence (CDS) from alignment at ch7:226774..228642+ >KJC3_009372-T1 ID=KJC3_009372-T1|Name=KJC3_009372-T1|organism=Aspergillus niger KJC3|type=CDS|length=8025bp|location=Sequence derived from alignment at ch7:226774..228642+ (Aspergillus niger KJC3)
ATGAACAATGCGGAGCTCAACCGAGAGGATTGCAACGATAATGAAAACCA
AGACGCTGATGGGGCCTCTCGGCCGGAAGGCCCGGTCCTACTACTTGGAA
TTTCACGGATGATGGACATGGCAGAGCTTCTGAACGCACTACCACCTCGC
AGAACTGCAGATCTGCTCGTCGATCGCTGTCTGGATTCTGGGGAACCATC
GCTAATTATCATTCATGCTCCGACGTTCAAAAGCGAGTACCTGAGATTCT
GGGATAATCCCGCAGGAGCACCTGTCGCCTGGATCGCACTATTGTATTCA
ATCCTGTCTTGTGGGATATACATCCAACATACGGCAGATTCAGAAGTTTT
CTCTCTAGACTTGCCAAGATCATTCTATATGTACCGTCATAACAGTGCAG
TTGCGTTGGCGAAGTCAAACTTCGCTACTCCGGGTCCATATAAAGTTGAA
GCATCCATCTTATACCTCGGAATCGAGTATCTCCAAAGCAATGAACAGAA
AACAGGACTCCCAATGTTACTCGGTGTTGTGTCGCGACTAGCAATTATGA
TGGGATATCATCGCGATCCTCAGCTATACCATCCTCAGATATCGAATTTC
GAAGCAGAAATGCGGCGCAGGGCATGGCTTATACTCATCACAATCGACTC
CGTACTCGCATGCCATACAGGTCTACCCAAGGTTATTAGCCGGAGCCTAG
GCGATGTGAGTCTCCCCAGAAATCTTCTGGATAGCGATTTTAGTCCAGAA
ACTACTGTTCTTCCTCCTCCGCGCCCCGCAGATGAGGTCGCCAGCAGCAT
CGTATACATGTCGGCAATGGAGCAAATGCTGTCTGTTTCCAACGAAGTCA
GCGACTTGGCATCATGTCCTTCGCTTTTTCCCGAAAGGGCTCTCGAATTG
AATTTACAGCTGGAAAATACCAAGAGTCGCTTGCCCAGCCTACTTCGGTT
GCAGTCTCCAGGGGCACGAGCATCAGATGACCAGACTGTGATCAAACAGT
ACTTTTTGGAAATAACATATCAACGCGCGCGATGCATCTTACACCGTCAT
TATTTGACGACCATTGATCCAGAGCCTCATGAAGGATTGAGATTAGTCTG
CGTGGATGCAGCCCAGCAGGTTCTAACTCTCCAGTCCGAACTGTTCCAAG
TTCTGGCTAAATCACATAACCAGCAGTTAGCGTGGTTTGGGGTATCTCGG
TCAATCTCCGATTGCTTGACAGCTGCCATGGTGATATCTTTGGAGGTGAT
AACCCAATCAAGAAATGGTGGAACTGTGGGAATTACGCCGCAGGCTGATC
TCATTGAGCTGCTGAAGGCCTCCCAAATATCCTGGAGGAGCTCACCAAGG
CCATCACTGGAGACCCTGAAAGCCGCCGATATAATTGGTACGATGTTAGA
CTTATTGGGATATGGCGGAGCGAGTCCCTTACCTGATTTACAAGGAACTC
AAGAAGGGCAGCAGAACCATAGAGAAACCACAGAGACGCTCTTACGATCT
CCAAGTATAATGCATGACATACTGACGGGAGATTATGCGTTGGAAATGTT
TGACTGGGCTCTTTGGGATCATGAGATGCAATATCTGAGTACTTTGGCAG
ATTAAATGAACAATGCGGAGCTCAACCGAGAGGATTGCAACGATAATGAA
AACCAAGACGCTGATGGGGCCTCTCGGCCGGAAGGCCCGGTCCTACTACT
TGGAATTTCACGGATGATGGACATGGCAGAGCTTCTGAACGCACTACCAC
CTCGCAGAACTGCAGATCTGCTCGTCGATCGCTGTCTGGATTCTGGGGAA
CCATCGCTAATTATCATTCATGCTCCGACGTTCAAAAGCGAGTACCTGAG
ATTCTGGGATAATCCCGCAGGAGCACCTGTCGCCTGGATCGCACTATTGT
ATTCAATCCTGTCTTGTGGGATATACATCCAACATACGGCAGATTCAGAA
GTTTTCTCTCTAGACTTGCCAAGATCATTCTATATGTACCGTCATAACAG
TGCAGTTGCGTTGGCGAAGTCAAACTTCGCTACTCCGGGTCCATATAAAG
TTGAAGCATCCATCTTATACCTCGGAATCGAGTATCTCCAAAGCAATGAA
CAGAAAACAGGACTCCCAATGTTACTCGGTGTTGTGTCGCGACTAGCAAT
TATGATGGGATATCATCGCGATCCTCAGCTATACCATCCTCAGATATCGA
ATTTCGAAGCAGAAATGCGGCGCAGGGCATGGCTTATACTCATCACAATC
GACTCCGTACTCGCATGCCATACAGGTCTACCCAAGGTTATTAGCCGGAG
CCTAGGCGATGTGAGTCTCCCCAGAAATCTTCTGGATAGCGATTTTAGTC
CAGAAACTACTGTTCTTCCTCCTCCGCGCCCCGCAGATGAGGTCGCCAGC
AGCATCGTATACATGTCGGCAATGGAGCAAATGCTGTCTGTTTCCAACGA
AGTCAGCGACTTGGCATCATGTCCTTCGCTTTTTCCCGAAAGGGCTCTCG
AATTGAATTTACAGCTGGAAAATACCAAGAGTCGCTTGCCCAGCCTACTT
CGGTTGCAGTCTCCAGGGGCACGAGCATCAGATGACCAGACTGTGATCAA
ACAGTACTTTTTGGAAATAACATATCAACGCGCGCGATGCATCTTACACC
GTCATTATTTGACGACCATTGATCCAGAGCCTCATGAAGGATTGAGATTA
GTCTGCGTGGATGCAGCCCAGCAGGTTCTAACTCTCCAGTCCGAACTGTT
CCAAGTTCTGGCTAAATCACATAACCAGCAGTTAGCGTGGTTTGGGGTAT
CTCGGTCAATCTCCGATTGCTTGACAGCTGCCATGGTGATATCTTTGGAG
GTGATAACCCAATCAAGAAATGGTGGAACTGTGGGAATTACGCCGCAGGC
TGATCTCATTGAGCTGCTGAAGGCCTCCCAAATATCCTGGAGGAGCTCAC
CAAGGCCATCACTGGAGACCCTGAAAGCCGCCGATATAATTGGTACGATG
TTAGACTTATTGGGATATGGCGGAGCGAGTCCCTTACCTGATTTACAAGG
AACTCAAGAAGGGCAGCAGAACCATAGAGAAACCACAGAGACGCTCTTAC
GATCTCCAAGTATAATGCATGACATACTGACGGGAGATTATGCGTTGGAA
ATGTTTGACTGGGCTCTTTGGGATCATGAGATGCAATATCTGAGTACTTT
GGCAGATTAAATGAACAATGCGGAGCTCAACCGAGAGGATTGCAACGATA
ATGAAAACCAAGACGCTGATGGGGCCTCTCGGCCGGAAGGCCCGGTCCTA
CTACTTGGAATTTCACGGATGATGGACATGGCAGAGCTTCTGAACGCACT
ACCACCTCGCAGAACTGCAGATCTGCTCGTCGATCGCTGTCTGGATTCTG
GGGAACCATCGCTAATTATCATTCATGCTCCGACGTTCAAAAGCGAGTAC
CTGAGATTCTGGGATAATCCCGCAGGAGCACCTGTCGCCTGGATCGCACT
ATTGTATTCAATCCTGTCTTGTGGGATATACATCCAACATACGGCAGATT
CAGAAGTTTTCTCTCTAGACTTGCCAAGATCATTCTATATGTACCGTCAT
AACAGTGCAGTTGCGTTGGCGAAGTCAAACTTCGCTACTCCGGGTCCATA
TAAAGTTGAAGCATCCATCTTATACCTCGGAATCGAGTATCTCCAAAGCA
ATGAACAGAAAACAGGACTCCCAATGTTACTCGGTGTTGTGTCGCGACTA
GCAATTATGATGGGATATCATCGCGATCCTCAGCTATACCATCCTCAGAT
ATCGAATTTCGAAGCAGAAATGCGGCGCAGGGCATGGCTTATACTCATCA
CAATCGACTCCGTACTCGCATGCCATACAGGTCTACCCAAGGTTATTAGC
CGGAGCCTAGGCGATGTGAGTCTCCCCAGAAATCTTCTGGATAGCGATTT
TAGTCCAGAAACTACTGTTCTTCCTCCTCCGCGCCCCGCAGATGAGGTCG
CCAGCAGCATCGTATACATGTCGGCAATGGAGCAAATGCTGTCTGTTTCC
AACGAAGTCAGCGACTTGGCATCATGTCCTTCGCTTTTTCCCGAAAGGGC
TCTCGAATTGAATTTACAGCTGGAAAATACCAAGAGTCGCTTGCCCAGCC
TACTTCGGTTGCAGTCTCCAGGGGCACGAGCATCAGATGACCAGACTGTG
ATCAAACAGTACTTTTTGGAAATAACATATCAACGCGCGCGATGCATCTT
ACACCGTCATTATTTGACGACCATTGATCCAGAGCCTCATGAAGGATTGA
GATTAGTCTGCGTGGATGCAGCCCAGCAGGTTCTAACTCTCCAGTCCGAA
CTGTTCCAAGTTCTGGCTAAATCACATAACCAGCAGTTAGCGTGGTTTGG
GGTATCTCGGTCAATCTCCGATTGCTTGACAGCTGCCATGGTGATATCTT
TGGAGGTGATAACCCAATCAAGAAATGGTGGAACTGTGGGAATTACGCCG
CAGGCTGATCTCATTGAGCTGCTGAAGGCCTCCCAAATATCCTGGAGGAG
CTCACCAAGGCCATCACTGGAGACCCTGAAAGCCGCCGATATAATTGGTA
CGATGTTAGACTTATTGGGATATGGCGGAGCGAGTCCCTTACCTGATTTA
CAAGGAACTCAAGAAGGGCAGCAGAACCATAGAGAAACCACAGAGACGCT
CTTACGATCTCCAAGTATAATGCATGACATACTGACGGGAGATTATGCGT
TGGAAATGTTTGACTGGGCTCTTTGGGATCATGAGATGCAATATCTGAGT
ACTTTGGCAGATTAAATGAACAATGCGGAGCTCAACCGAGAGGATTGCAA
CGATAATGAAAACCAAGACGCTGATGGGGCCTCTCGGCCGGAAGGCCCGG
TCCTACTACTTGGAATTTCACGGATGATGGACATGGCAGAGCTTCTGAAC
GCACTACCACCTCGCAGAACTGCAGATCTGCTCGTCGATCGCTGTCTGGA
TTCTGGGGAACCATCGCTAATTATCATTCATGCTCCGACGTTCAAAAGCG
AGTACCTGAGATTCTGGGATAATCCCGCAGGAGCACCTGTCGCCTGGATC
GCACTATTGTATTCAATCCTGTCTTGTGGGATATACATCCAACATACGGC
AGATTCAGAAGTTTTCTCTCTAGACTTGCCAAGATCATTCTATATGTACC
GTCATAACAGTGCAGTTGCGTTGGCGAAGTCAAACTTCGCTACTCCGGGT
CCATATAAAGTTGAAGCATCCATCTTATACCTCGGAATCGAGTATCTCCA
AAGCAATGAACAGAAAACAGGACTCCCAATGTTACTCGGTGTTGTGTCGC
GACTAGCAATTATGATGGGATATCATCGCGATCCTCAGCTATACCATCCT
CAGATATCGAATTTCGAAGCAGAAATGCGGCGCAGGGCATGGCTTATACT
CATCACAATCGACTCCGTACTCGCATGCCATACAGGTCTACCCAAGGTTA
TTAGCCGGAGCCTAGGCGATGTGAGTCTCCCCAGAAATCTTCTGGATAGC
GATTTTAGTCCAGAAACTACTGTTCTTCCTCCTCCGCGCCCCGCAGATGA
GGTCGCCAGCAGCATCGTATACATGTCGGCAATGGAGCAAATGCTGTCTG
TTTCCAACGAAGTCAGCGACTTGGCATCATGTCCTTCGCTTTTTCCCGAA
AGGGCTCTCGAATTGAATTTACAGCTGGAAAATACCAAGAGTCGCTTGCC
CAGCCTACTTCGGTTGCAGTCTCCAGGGGCACGAGCATCAGATGACCAGA
CTGTGATCAAACAGTACTTTTTGGAAATAACATATCAACGCGCGCGATGC
ATCTTACACCGTCATTATTTGACGACCATTGATCCAGAGCCTCATGAAGG
ATTGAGATTAGTCTGCGTGGATGCAGCCCAGCAGGTTCTAACTCTCCAGT
CCGAACTGTTCCAAGTTCTGGCTAAATCACATAACCAGCAGTTAGCGTGG
TTTGGGGTATCTCGGTCAATCTCCGATTGCTTGACAGCTGCCATGGTGAT
ATCTTTGGAGGTGATAACCCAATCAAGAAATGGTGGAACTGTGGGAATTA
CGCCGCAGGCTGATCTCATTGAGCTGCTGAAGGCCTCCCAAATATCCTGG
AGGAGCTCACCAAGGCCATCACTGGAGACCCTGAAAGCCGCCGATATAAT
TGGTACGATGTTAGACTTATTGGGATATGGCGGAGCGAGTCCCTTACCTG
ATTTACAAGGAACTCAAGAAGGGCAGCAGAACCATAGAGAAACCACAGAG
ACGCTCTTACGATCTCCAAGTATAATGCATGACATACTGACGGGAGATTA
TGCGTTGGAAATGTTTGACTGGGCTCTTTGGGATCATGAGATGCAATATC
TGAGTACTTTGGCAGATTAAATGAACAATGCGGAGCTCAACCGAGAGGAT
TGCAACGATAATGAAAACCAAGACGCTGATGGGGCCTCTCGGCCGGAAGG
CCCGGTCCTACTACTTGGAATTTCACGGATGATGGACATGGCAGAGCTTC
TGAACGCACTACCACCTCGCAGAACTGCAGATCTGCTCGTCGATCGCTGT
CTGGATTCTGGGGAACCATCGCTAATTATCATTCATGCTCCGACGTTCAA
AAGCGAGTACCTGAGATTCTGGGATAATCCCGCAGGAGCACCTGTCGCCT
GGATCGCACTATTGTATTCAATCCTGTCTTGTGGGATATACATCCAACAT
ACGGCAGATTCAGAAGTTTTCTCTCTAGACTTGCCAAGATCATTCTATAT
GTACCGTCATAACAGTGCAGTTGCGTTGGCGAAGTCAAACTTCGCTACTC
CGGGTCCATATAAAGTTGAAGCATCCATCTTATACCTCGGAATCGAGTAT
CTCCAAAGCAATGAACAGAAAACAGGACTCCCAATGTTACTCGGTGTTGT
GTCGCGACTAGCAATTATGATGGGATATCATCGCGATCCTCAGCTATACC
ATCCTCAGATATCGAATTTCGAAGCAGAAATGCGGCGCAGGGCATGGCTT
ATACTCATCACAATCGACTCCGTACTCGCATGCCATACAGGTCTACCCAA
GGTTATTAGCCGGAGCCTAGGCGATGTGAGTCTCCCCAGAAATCTTCTGG
ATAGCGATTTTAGTCCAGAAACTACTGTTCTTCCTCCTCCGCGCCCCGCA
GATGAGGTCGCCAGCAGCATCGTATACATGTCGGCAATGGAGCAAATGCT
GTCTGTTTCCAACGAAGTCAGCGACTTGGCATCATGTCCTTCGCTTTTTC
CCGAAAGGGCTCTCGAATTGAATTTACAGCTGGAAAATACCAAGAGTCGC
TTGCCCAGCCTACTTCGGTTGCAGTCTCCAGGGGCACGAGCATCAGATGA
CCAGACTGTGATCAAACAGTACTTTTTGGAAATAACATATCAACGCGCGC
GATGCATCTTACACCGTCATTATTTGACGACCATTGATCCAGAGCCTCAT
GAAGGATTGAGATTAGTCTGCGTGGATGCAGCCCAGCAGGTTCTAACTCT
CCAGTCCGAACTGTTCCAAGTTCTGGCTAAATCACATAACCAGCAGTTAG
CGTGGTTTGGGGTATCTCGGTCAATCTCCGATTGCTTGACAGCTGCCATG
GTGATATCTTTGGAGGTGATAACCCAATCAAGAAATGGTGGAACTGTGGG
AATTACGCCGCAGGCTGATCTCATTGAGCTGCTGAAGGCCTCCCAAATAT
CCTGGAGGAGCTCACCAAGGCCATCACTGGAGACCCTGAAAGCCGCCGAT
ATAATTGGTACGATGTTAGACTTATTGGGATATGGCGGAGCGAGTCCCTT
ACCTGATTTACAAGGAACTCAAGAAGGGCAGCAGAACCATAGAGAAACCA
CAGAGACGCTCTTACGATCTCCAAGTATAATGCATGACATACTGACGGGA
GATTATGCGTTGGAAATGTTTGACTGGGCTCTTTGGGATCATGAGATGCA
ATATCTGAGTACTTTGGCAGATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:226774..228642 + |
|
