You are here

KJC3_009380-T1, KJC3_009380-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009380-T1
Unique NameKJC3_009380-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:240222..241256-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009380-T1 ID=KJC3_009380-T1|Name=KJC3_009380-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1035bp|location=Sequence derived from alignment at ch7:240222..241256- (Aspergillus niger KJC3)
ATGCAAGAAAAGCTTCTCTATCTTACCTGGCTGCCACCGTTCGCACGAGC CGAAAAGATCTCCGACTATGAAACTGAATGTAAGCCGGTGCGCTGGCAAG CGCACCAAATTCGGAGTCGCGATGGTACCAAACTATCAGTATGCGAAGGT CGCATTCCTGCTAAAGCCACTTCTTCTGGAAGCCTTCAGCAGACGAAAAA TCACAGTAAGAAGAAATTAGTAGTGATTTGCTACTTCCAGGGCAACGGTG GCTCAACTCCCATGCGTTTGCCCCTTCTATCGCAGTTCCTGCGCGCAATA TACGCCTCTCCCAAAACTTCTCCTGCTGCTTCAGCGTCTGAAGAGAAGGA CTACGTGGTAGTAGCTCTCTCGTACCGCGGATTCTGGACATCTTCTGGTC GTCCTACCCAGCACGGTATTGAGCTCGACACTCAAGCTTTTCTTGATTGG GTTACGGAGACCTACACTGCCCCGGACACAGATCTCCAGATCATTCTGTG GGGGCATAGTCTGGGTTCGGCGATTGCGACCACTGGTCTTGCTACGTATC TTCCGCGGTCGCGCAATGCAAATTCCCAATCTTCGGCTCCTATTGCTGGG ATAATTCTCGAGGCGCCTTCCTCCAGCGTCAAGGACATGCTGATTAGCCT CTATCCCCAGAAATGGTTGCCGTATCGATATCTTTGGCCGTTTTTGCGGA GTCATTGGGATAGTATCCTTGCTATGGATCGGATGGCACGCTGGAGGGAT GATTTAAATGATGGAGATAAATACAGTGCGGATGGCAATGGTGACGGGGC CACATTGCCACCAGTCCTAATAATGTCTGCCGAGAAAGACGAGGTCATTC CCGCACATGCAGCAGATGATCTGGAACGGGAGGGCAGACTACTTGGCCTG GATATGTCTCGAAAACACGTTCTTGGGGCTCTTCATACGGAGATCCCAGT CAAGGCGAGTGGGAGAGATGCTATGGTAGAATTCATTGGTCGATGTACGT CTGGCCCCACGGGGGAAAGGCGTGATGTTACTTAG
back to top

Coding sequence (CDS) from alignment at ch7:240222..241256-

>KJC3_009380-T1 ID=KJC3_009380-T1|Name=KJC3_009380-T1|organism=Aspergillus niger KJC3|type=CDS|length=1035bp|location=Sequence derived from alignment at ch7:240222..241256- (Aspergillus niger KJC3)
ATGCAAGAAAAGCTTCTCTATCTTACCTGGCTGCCACCGTTCGCACGAGC
CGAAAAGATCTCCGACTATGAAACTGAATGTAAGCCGGTGCGCTGGCAAG
CGCACCAAATTCGGAGTCGCGATGGTACCAAACTATCAGTATGCGAAGGT
CGCATTCCTGCTAAAGCCACTTCTTCTGGAAGCCTTCAGCAGACGAAAAA
TCACAGTAAGAAGAAATTAGTAGTGATTTGCTACTTCCAGGGCAACGGTG
GCTCAACTCCCATGCGTTTGCCCCTTCTATCGCAGTTCCTGCGCGCAATA
TACGCCTCTCCCAAAACTTCTCCTGCTGCTTCAGCGTCTGAAGAGAAGGA
CTACGTGGTAGTAGCTCTCTCGTACCGCGGATTCTGGACATCTTCTGGTC
GTCCTACCCAGCACGGTATTGAGCTCGACACTCAAGCTTTTCTTGATTGG
GTTACGGAGACCTACACTGCCCCGGACACAGATCTCCAGATCATTCTGTG
GGGGCATAGTCTGGGTTCGGCGATTGCGACCACTGGTCTTGCTACGTATC
TTCCGCGGTCGCGCAATGCAAATTCCCAATCTTCGGCTCCTATTGCTGGG
ATAATTCTCGAGGCGCCTTCCTCCAGCGTCAAGGACATGCTGATTAGCCT
CTATCCCCAGAAATGGTTGCCGTATCGATATCTTTGGCCGTTTTTGCGGA
GTCATTGGGATAGTATCCTTGCTATGGATCGGATGGCACGCTGGAGGGAT
GATTTAAATGATGGAGATAAATACAGTGCGGATGGCAATGGTGACGGGGC
CACATTGCCACCAGTCCTAATAATGTCTGCCGAGAAAGACGAGGTCATTC
CCGCACATGCAGCAGATGATCTGGAACGGGAGGGCAGACTACTTGGCCTG
GATATGTCTCGAAAACACGTTCTTGGGGCTCTTCATACGGAGATCCCAGT
CAAGGCGAGTGGGAGAGATGCTATGGTAGAATTCATTGGTCGATGTACGT
CTGGCCCCACGGGGGAAAGGCGTGATGTTACTTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009380KJC3_009380Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009380-T1.cdsKJC3_009380-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009380-T1.exon1KJC3_009380-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009380-T1KJC3_009380-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteMEROPS:MER0017243
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR000073
DBxrefPFAM:PF12697
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:240222..241256 -