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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:246447..248410+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009383-T1 ID=KJC3_009383-T1|Name=KJC3_009383-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1964bp|location=Sequence derived from alignment at ch7:246447..248410+ (Aspergillus niger KJC3)
CGTTGCTGTGATTTTTACTGGTCCCGTCTCTATATTCCCTGGCTTCAGGC
TCAGTCCGAAGTGTGCAGGATGGCCTTCACCCAGAACACGCAGCAGGATG
CTGCCAAGGAATCCGTAGTTACTGGCTCGCACACTGTAGAAGTCGATGCT
TCCAGTCAGGAGGAGGGTATCAATGGCACACGCTACGACGTGACTGAAAT
GGATCGGATGGGAAAGACCCAGCAGTTCAAGGTAGATATGCTGCTCCCAG
ACAATACCGCACAGCTAATTAATATGTTCGCAGCGAAACATCCAGTCTTT
TGCCGCCCTCAGTTTTTCGGCCGTATTGCAGTCTACGTGGGAGTACATCA
TGCTGTGAGGCAACCAGAATTTTCGCTACTCCCTTCAGGATCTAAACATT
AGCAGGTCGGACTATGAAGGGTTGCAAGATGGTGGATTGGCAGGTATGCT
GTGGACCTATGTCTGGAGCGCCATTGGATTTGGGTTCATCATCGTCTCTA
TCTCTGAGATGGCCTCGATGTAAACTGCCCCGTCTTTATACAAACCATCA
CAGCAACTAACCCTCTAGGGCGCCTACTTCTGGAGGCCAGTACCATTGGG
TCTCCGAGTTTGCATCTCCCCGCTACCAGAAATTCCTTAGCTACGTGACT
GGCTGGATGTCTGTTTTGGCGTGGCAGGCAGGAACCGCATCGGGCTCATT
CTTGACTGGAACCATCATCCAGGGCCTGATTAGCGTCCGCGACCCCAACT
ACGACCCCACCGGATGGCAAGGCACATTGTTTGTGTTTGCGATGATTCTC
ATTGCGTTCTTCTTCAACATATACGGTGCGGGATTCATGGCCCGTATGCA
AAATGTGCTTCTGGCAACTCACGTCCTCTGCTGGCTGGTTGTTGTGGTGA
CACTTTGGGTCCTGGCCCCGCTACAGCCTGCTGAAGCAGTCTTCACGAAG
TTTGAGAACTTCGGTGGATGGTCATCCATGGGTCTAACTGTGATGGTGGG
TCAGCTTGCGGCCATCTATGGCTGTCTCAGTATGTATACACGCAACGAAT
CGAAATATCGACACTGACAAATACAGGTTGCGATGCAACGGCCCACATGT
CAGAGGAAATCAAAGATGCAGGCCGTTACGTGCCTATTGCCATCACCTGG
TCTTATTTCGCCAACGCTATCTTAGCACTAGTCGTGCTCATCACAATGCT
CTTCGCAACACCATCAGTTGAAGACTCACTCAACGATGACACCGGCTTTC
CCTTCATCTACGTTTTCAAACAAGCGACCAACACAGCAGGCGTCAACGGT
CTAACTGCCATTATTCTCATTCCCGTGATAATAAGCAACATACTCTTCAA
CGCCTCCACTGCACGACAAACATTCTCCTTCGCTCGCGATCGCGGGCTCC
CATTCTCCAACTGGATCGCCAAAGTCGACGAAAAGCGCAAGTTACCAGTC
AACTCCATCATCCTCAGCTGCATCATCAGCGCCCTACTATCCCTTATCAA
CATCGGGTCCGAGACCGCCTTCAACGCCATTGTCTCTCTCAACGTAGCGG
CCCTCATGTTCTCCTACTCCATCTCCATGAGCTGTCTGATCTGGCGAAAG
ATCTTCCACCCGCATACTCTGCCCCCTGCTCGCTGGGGGCTAGGACGCTA
TGGTCTGGCGGTAAATATCATTGGCTGGTTGTACGTACTGTTTGCCCTGT
TTTGGTCGTTCTGGCCGGAGTCGACACCCGTCACGACTGAGACGTTTAAC
TGGAGTGTGGTGATTTTCGTGGCGGTATTTTTGGTGAGTTTGGTTATGTA
TGTGGTTCAGGGGAGACGCCACTATGATGGGCCGGTGACGGAGGTGAAGA
GGTGTGAGGATTTGTAGATGCCTGAGTCTAATACTTATAGAGGTGGCGCA
AATTGTATAAATAGGATAGAATATTTCCTGTAAGAATGGAAAGAGACACA
TCTAAGTACTAAAG back to topCoding sequence (CDS) from alignment at ch7:246447..248410+ >KJC3_009383-T1 ID=KJC3_009383-T1|Name=KJC3_009383-T1|organism=Aspergillus niger KJC3|type=CDS|length=7995bp|location=Sequence derived from alignment at ch7:246447..248410+ (Aspergillus niger KJC3)
ATGGCCTTCACCCAGAACACGCAGCAGGATGCTGCCAAGGAATCCGTAGT
TACTGGCTCGCACACTGTAGAAGTCGATGCTTCCAGTCAGGAGGAGGGTA
TCAATGGCACACGCTACGACGTGACTGAAATGGATCGGATGGGAAAGACC
CAGCAGTTCAAGCGAAACATCCAGTCTTTTGCCGCCCTCAGTTTTTCGGC
CGTATTGCAGTCTACGTGGGAGTACATCATGCTGTCGGACTATGAAGGGT
TGCAAGATGGTGGATTGGCAGGTATGCTGTGGACCTATGTCTGGAGCGCC
ATTGGATTTGGGTTCATCATCGTCTCTATCTCTGAGATGGCCTCGATGGC
GCCTACTTCTGGAGGCCAGTACCATTGGGTCTCCGAGTTTGCATCTCCCC
GCTACCAGAAATTCCTTAGCTACGTGACTGGCTGGATGTCTGTTTTGGCG
TGGCAGGCAGGAACCGCATCGGGCTCATTCTTGACTGGAACCATCATCCA
GGGCCTGATTAGCGTCCGCGACCCCAACTACGACCCCACCGGATGGCAAG
GCACATTGTTTGTGTTTGCGATGATTCTCATTGCGTTCTTCTTCAACATA
TACGGTGCGGGATTCATGGCCCGTATGCAAAATGTGCTTCTGGCAACTCA
CGTCCTCTGCTGGCTGGTTGTTGTGGTGACACTTTGGGTCCTGGCCCCGC
TACAGCCTGCTGAAGCAGTCTTCACGAAGTTTGAGAACTTCGGTGGATGG
TCATCCATGGGTCTAACTGTGATGGTGGGTCAGCTTGCGGCCATCTATGG
CTGTCTCAGTTGCGATGCAACGGCCCACATGTCAGAGGAAATCAAAGATG
CAGGCCGTTACGTGCCTATTGCCATCACCTGGTCTTATTTCGCCAACGCT
ATCTTAGCACTAGTCGTGCTCATCACAATGCTCTTCGCAACACCATCAGT
TGAAGACTCACTCAACGATGACACCGGCTTTCCCTTCATCTACGTTTTCA
AACAAGCGACCAACACAGCAGGCGTCAACGGTCTAACTGCCATTATTCTC
ATTCCCGTGATAATAAGCAACATACTCTTCAACGCCTCCACTGCACGACA
AACATTCTCCTTCGCTCGCGATCGCGGGCTCCCATTCTCCAACTGGATCG
CCAAAGTCGACGAAAAGCGCAAGTTACCAGTCAACTCCATCATCCTCAGC
TGCATCATCAGCGCCCTACTATCCCTTATCAACATCGGGTCCGAGACCGC
CTTCAACGCCATTGTCTCTCTCAACGTAGCGGCCCTCATGTTCTCCTACT
CCATCTCCATGAGCTGTCTGATCTGGCGAAAGATCTTCCACCCGCATACT
CTGCCCCCTGCTCGCTGGGGGCTAGGACGCTATGGTCTGGCGGTAAATAT
CATTGGCTGGTTGTACGTACTGTTTGCCCTGTTTTGGTCGTTCTGGCCGG
AGTCGACACCCGTCACGACTGAGACGTTTAACTGGAGTGTGGTGATTTTC
GTGGCGGTATTTTTGGTGAGTTTGGTTATGTATGTGGTTCAGGGGAGACG
CCACTATGATGGGCCGGTGACGGAGGTGAAGAGGTGTGAGGATTTGTAGA
TGGCCTTCACCCAGAACACGCAGCAGGATGCTGCCAAGGAATCCGTAGTT
ACTGGCTCGCACACTGTAGAAGTCGATGCTTCCAGTCAGGAGGAGGGTAT
CAATGGCACACGCTACGACGTGACTGAAATGGATCGGATGGGAAAGACCC
AGCAGTTCAAGCGAAACATCCAGTCTTTTGCCGCCCTCAGTTTTTCGGCC
GTATTGCAGTCTACGTGGGAGTACATCATGCTGTCGGACTATGAAGGGTT
GCAAGATGGTGGATTGGCAGGTATGCTGTGGACCTATGTCTGGAGCGCCA
TTGGATTTGGGTTCATCATCGTCTCTATCTCTGAGATGGCCTCGATGGCG
CCTACTTCTGGAGGCCAGTACCATTGGGTCTCCGAGTTTGCATCTCCCCG
CTACCAGAAATTCCTTAGCTACGTGACTGGCTGGATGTCTGTTTTGGCGT
GGCAGGCAGGAACCGCATCGGGCTCATTCTTGACTGGAACCATCATCCAG
GGCCTGATTAGCGTCCGCGACCCCAACTACGACCCCACCGGATGGCAAGG
CACATTGTTTGTGTTTGCGATGATTCTCATTGCGTTCTTCTTCAACATAT
ACGGTGCGGGATTCATGGCCCGTATGCAAAATGTGCTTCTGGCAACTCAC
GTCCTCTGCTGGCTGGTTGTTGTGGTGACACTTTGGGTCCTGGCCCCGCT
ACAGCCTGCTGAAGCAGTCTTCACGAAGTTTGAGAACTTCGGTGGATGGT
CATCCATGGGTCTAACTGTGATGGTGGGTCAGCTTGCGGCCATCTATGGC
TGTCTCAGTTGCGATGCAACGGCCCACATGTCAGAGGAAATCAAAGATGC
AGGCCGTTACGTGCCTATTGCCATCACCTGGTCTTATTTCGCCAACGCTA
TCTTAGCACTAGTCGTGCTCATCACAATGCTCTTCGCAACACCATCAGTT
GAAGACTCACTCAACGATGACACCGGCTTTCCCTTCATCTACGTTTTCAA
ACAAGCGACCAACACAGCAGGCGTCAACGGTCTAACTGCCATTATTCTCA
TTCCCGTGATAATAAGCAACATACTCTTCAACGCCTCCACTGCACGACAA
ACATTCTCCTTCGCTCGCGATCGCGGGCTCCCATTCTCCAACTGGATCGC
CAAAGTCGACGAAAAGCGCAAGTTACCAGTCAACTCCATCATCCTCAGCT
GCATCATCAGCGCCCTACTATCCCTTATCAACATCGGGTCCGAGACCGCC
TTCAACGCCATTGTCTCTCTCAACGTAGCGGCCCTCATGTTCTCCTACTC
CATCTCCATGAGCTGTCTGATCTGGCGAAAGATCTTCCACCCGCATACTC
TGCCCCCTGCTCGCTGGGGGCTAGGACGCTATGGTCTGGCGGTAAATATC
ATTGGCTGGTTGTACGTACTGTTTGCCCTGTTTTGGTCGTTCTGGCCGGA
GTCGACACCCGTCACGACTGAGACGTTTAACTGGAGTGTGGTGATTTTCG
TGGCGGTATTTTTGGTGAGTTTGGTTATGTATGTGGTTCAGGGGAGACGC
CACTATGATGGGCCGGTGACGGAGGTGAAGAGGTGTGAGGATTTGTAGAT
GGCCTTCACCCAGAACACGCAGCAGGATGCTGCCAAGGAATCCGTAGTTA
CTGGCTCGCACACTGTAGAAGTCGATGCTTCCAGTCAGGAGGAGGGTATC
AATGGCACACGCTACGACGTGACTGAAATGGATCGGATGGGAAAGACCCA
GCAGTTCAAGCGAAACATCCAGTCTTTTGCCGCCCTCAGTTTTTCGGCCG
TATTGCAGTCTACGTGGGAGTACATCATGCTGTCGGACTATGAAGGGTTG
CAAGATGGTGGATTGGCAGGTATGCTGTGGACCTATGTCTGGAGCGCCAT
TGGATTTGGGTTCATCATCGTCTCTATCTCTGAGATGGCCTCGATGGCGC
CTACTTCTGGAGGCCAGTACCATTGGGTCTCCGAGTTTGCATCTCCCCGC
TACCAGAAATTCCTTAGCTACGTGACTGGCTGGATGTCTGTTTTGGCGTG
GCAGGCAGGAACCGCATCGGGCTCATTCTTGACTGGAACCATCATCCAGG
GCCTGATTAGCGTCCGCGACCCCAACTACGACCCCACCGGATGGCAAGGC
ACATTGTTTGTGTTTGCGATGATTCTCATTGCGTTCTTCTTCAACATATA
CGGTGCGGGATTCATGGCCCGTATGCAAAATGTGCTTCTGGCAACTCACG
TCCTCTGCTGGCTGGTTGTTGTGGTGACACTTTGGGTCCTGGCCCCGCTA
CAGCCTGCTGAAGCAGTCTTCACGAAGTTTGAGAACTTCGGTGGATGGTC
ATCCATGGGTCTAACTGTGATGGTGGGTCAGCTTGCGGCCATCTATGGCT
GTCTCAGTTGCGATGCAACGGCCCACATGTCAGAGGAAATCAAAGATGCA
GGCCGTTACGTGCCTATTGCCATCACCTGGTCTTATTTCGCCAACGCTAT
CTTAGCACTAGTCGTGCTCATCACAATGCTCTTCGCAACACCATCAGTTG
AAGACTCACTCAACGATGACACCGGCTTTCCCTTCATCTACGTTTTCAAA
CAAGCGACCAACACAGCAGGCGTCAACGGTCTAACTGCCATTATTCTCAT
TCCCGTGATAATAAGCAACATACTCTTCAACGCCTCCACTGCACGACAAA
CATTCTCCTTCGCTCGCGATCGCGGGCTCCCATTCTCCAACTGGATCGCC
AAAGTCGACGAAAAGCGCAAGTTACCAGTCAACTCCATCATCCTCAGCTG
CATCATCAGCGCCCTACTATCCCTTATCAACATCGGGTCCGAGACCGCCT
TCAACGCCATTGTCTCTCTCAACGTAGCGGCCCTCATGTTCTCCTACTCC
ATCTCCATGAGCTGTCTGATCTGGCGAAAGATCTTCCACCCGCATACTCT
GCCCCCTGCTCGCTGGGGGCTAGGACGCTATGGTCTGGCGGTAAATATCA
TTGGCTGGTTGTACGTACTGTTTGCCCTGTTTTGGTCGTTCTGGCCGGAG
TCGACACCCGTCACGACTGAGACGTTTAACTGGAGTGTGGTGATTTTCGT
GGCGGTATTTTTGGTGAGTTTGGTTATGTATGTGGTTCAGGGGAGACGCC
ACTATGATGGGCCGGTGACGGAGGTGAAGAGGTGTGAGGATTTGTAGATG
GCCTTCACCCAGAACACGCAGCAGGATGCTGCCAAGGAATCCGTAGTTAC
TGGCTCGCACACTGTAGAAGTCGATGCTTCCAGTCAGGAGGAGGGTATCA
ATGGCACACGCTACGACGTGACTGAAATGGATCGGATGGGAAAGACCCAG
CAGTTCAAGCGAAACATCCAGTCTTTTGCCGCCCTCAGTTTTTCGGCCGT
ATTGCAGTCTACGTGGGAGTACATCATGCTGTCGGACTATGAAGGGTTGC
AAGATGGTGGATTGGCAGGTATGCTGTGGACCTATGTCTGGAGCGCCATT
GGATTTGGGTTCATCATCGTCTCTATCTCTGAGATGGCCTCGATGGCGCC
TACTTCTGGAGGCCAGTACCATTGGGTCTCCGAGTTTGCATCTCCCCGCT
ACCAGAAATTCCTTAGCTACGTGACTGGCTGGATGTCTGTTTTGGCGTGG
CAGGCAGGAACCGCATCGGGCTCATTCTTGACTGGAACCATCATCCAGGG
CCTGATTAGCGTCCGCGACCCCAACTACGACCCCACCGGATGGCAAGGCA
CATTGTTTGTGTTTGCGATGATTCTCATTGCGTTCTTCTTCAACATATAC
GGTGCGGGATTCATGGCCCGTATGCAAAATGTGCTTCTGGCAACTCACGT
CCTCTGCTGGCTGGTTGTTGTGGTGACACTTTGGGTCCTGGCCCCGCTAC
AGCCTGCTGAAGCAGTCTTCACGAAGTTTGAGAACTTCGGTGGATGGTCA
TCCATGGGTCTAACTGTGATGGTGGGTCAGCTTGCGGCCATCTATGGCTG
TCTCAGTTGCGATGCAACGGCCCACATGTCAGAGGAAATCAAAGATGCAG
GCCGTTACGTGCCTATTGCCATCACCTGGTCTTATTTCGCCAACGCTATC
TTAGCACTAGTCGTGCTCATCACAATGCTCTTCGCAACACCATCAGTTGA
AGACTCACTCAACGATGACACCGGCTTTCCCTTCATCTACGTTTTCAAAC
AAGCGACCAACACAGCAGGCGTCAACGGTCTAACTGCCATTATTCTCATT
CCCGTGATAATAAGCAACATACTCTTCAACGCCTCCACTGCACGACAAAC
ATTCTCCTTCGCTCGCGATCGCGGGCTCCCATTCTCCAACTGGATCGCCA
AAGTCGACGAAAAGCGCAAGTTACCAGTCAACTCCATCATCCTCAGCTGC
ATCATCAGCGCCCTACTATCCCTTATCAACATCGGGTCCGAGACCGCCTT
CAACGCCATTGTCTCTCTCAACGTAGCGGCCCTCATGTTCTCCTACTCCA
TCTCCATGAGCTGTCTGATCTGGCGAAAGATCTTCCACCCGCATACTCTG
CCCCCTGCTCGCTGGGGGCTAGGACGCTATGGTCTGGCGGTAAATATCAT
TGGCTGGTTGTACGTACTGTTTGCCCTGTTTTGGTCGTTCTGGCCGGAGT
CGACACCCGTCACGACTGAGACGTTTAACTGGAGTGTGGTGATTTTCGTG
GCGGTATTTTTGGTGAGTTTGGTTATGTATGTGGTTCAGGGGAGACGCCA
CTATGATGGGCCGGTGACGGAGGTGAAGAGGTGTGAGGATTTGTAGATGG
CCTTCACCCAGAACACGCAGCAGGATGCTGCCAAGGAATCCGTAGTTACT
GGCTCGCACACTGTAGAAGTCGATGCTTCCAGTCAGGAGGAGGGTATCAA
TGGCACACGCTACGACGTGACTGAAATGGATCGGATGGGAAAGACCCAGC
AGTTCAAGCGAAACATCCAGTCTTTTGCCGCCCTCAGTTTTTCGGCCGTA
TTGCAGTCTACGTGGGAGTACATCATGCTGTCGGACTATGAAGGGTTGCA
AGATGGTGGATTGGCAGGTATGCTGTGGACCTATGTCTGGAGCGCCATTG
GATTTGGGTTCATCATCGTCTCTATCTCTGAGATGGCCTCGATGGCGCCT
ACTTCTGGAGGCCAGTACCATTGGGTCTCCGAGTTTGCATCTCCCCGCTA
CCAGAAATTCCTTAGCTACGTGACTGGCTGGATGTCTGTTTTGGCGTGGC
AGGCAGGAACCGCATCGGGCTCATTCTTGACTGGAACCATCATCCAGGGC
CTGATTAGCGTCCGCGACCCCAACTACGACCCCACCGGATGGCAAGGCAC
ATTGTTTGTGTTTGCGATGATTCTCATTGCGTTCTTCTTCAACATATACG
GTGCGGGATTCATGGCCCGTATGCAAAATGTGCTTCTGGCAACTCACGTC
CTCTGCTGGCTGGTTGTTGTGGTGACACTTTGGGTCCTGGCCCCGCTACA
GCCTGCTGAAGCAGTCTTCACGAAGTTTGAGAACTTCGGTGGATGGTCAT
CCATGGGTCTAACTGTGATGGTGGGTCAGCTTGCGGCCATCTATGGCTGT
CTCAGTTGCGATGCAACGGCCCACATGTCAGAGGAAATCAAAGATGCAGG
CCGTTACGTGCCTATTGCCATCACCTGGTCTTATTTCGCCAACGCTATCT
TAGCACTAGTCGTGCTCATCACAATGCTCTTCGCAACACCATCAGTTGAA
GACTCACTCAACGATGACACCGGCTTTCCCTTCATCTACGTTTTCAAACA
AGCGACCAACACAGCAGGCGTCAACGGTCTAACTGCCATTATTCTCATTC
CCGTGATAATAAGCAACATACTCTTCAACGCCTCCACTGCACGACAAACA
TTCTCCTTCGCTCGCGATCGCGGGCTCCCATTCTCCAACTGGATCGCCAA
AGTCGACGAAAAGCGCAAGTTACCAGTCAACTCCATCATCCTCAGCTGCA
TCATCAGCGCCCTACTATCCCTTATCAACATCGGGTCCGAGACCGCCTTC
AACGCCATTGTCTCTCTCAACGTAGCGGCCCTCATGTTCTCCTACTCCAT
CTCCATGAGCTGTCTGATCTGGCGAAAGATCTTCCACCCGCATACTCTGC
CCCCTGCTCGCTGGGGGCTAGGACGCTATGGTCTGGCGGTAAATATCATT
GGCTGGTTGTACGTACTGTTTGCCCTGTTTTGGTCGTTCTGGCCGGAGTC
GACACCCGTCACGACTGAGACGTTTAACTGGAGTGTGGTGATTTTCGTGG
CGGTATTTTTGGTGAGTTTGGTTATGTATGTGGTTCAGGGGAGACGCCAC
TATGATGGGCCGGTGACGGAGGTGAAGAGGTGTGAGGATTTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009383-T1.utr5p1 | KJC3_009383-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009383-T1.utr3p1 | KJC3_009383-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002293 |
| DBxref | PFAM:PF13520 |
| DBxref | PFAM:PF00324 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:246447..248410 + |
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