|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:256140..257143+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009387-T1 ID=KJC3_009387-T1|Name=KJC3_009387-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1004bp|location=Sequence derived from alignment at ch7:256140..257143+ (Aspergillus niger KJC3)
CTGAGATAGAGACAGCTGTATTACAGTCTCTATTATTATTTTCACCTTCT
ATTTTCCCACTACAATTATCGTATTACCAAAATGCTACGTCTTGACGGCA
AAGTCGCCCTTATCACCGGCCTCGGCCAGACCACCGACGAAGGCTGGGGT
ATCGGTGCCGCCATCGCCATGAAACTCTCCCAGCAAGGCGCAATTATTTT
CGGAGGCAATCGCACATTATCCAGTGCCGAAAGAACAAAAGCCCGAATTG
AAAAGGAGGGCGGAACATGCGAAGTCCAAGAAACAAACGTCACAGATTCC
ACATCCGTCAAAGCTCTCGTGGATAGCTGCATGCAACGCCACGGGCGCAT
CGACATCCTGATCAACAACGTGGGAAAATCGGAGCCAGGTGGCCCTGCCG
AGCTAAGCGAGGAAACGTGGGACCAACAAGTTGATCTGAACCTGAAAAGC
GTCTATCTGACGAGTCATTTTGTGCTTCCTATTATGGAGAAGCAGGAGAC
GGGCGGCACGGTGATAAATGTGTCGAGCATTGCAGGGCTGCGGTATATCG
GGAAGCCGCAGGTTGCATATTCGGCTACGAAAGCGGCCATTATGCAGTTC
ACGAAGGCCACGGCGGTGATATATGCGGGGAAGGGAGTGAGGTTGAATAC
TGTTGTTCCTGGGCTGATTTATACGCCGTACACTCGTGACCTTGCGAAGC
GGTATGCTCCTGGGGGTGATGAAGAGGCGTACATGAAGAAGCGCGATGAA
CAGGTGCCAATGGGACGCATGGGAGATGCTTGGGATGTGGCTAATGCCAC
GGTGTTTCTCGCTTCGGATGAGGCACGGTATATCACGGGACAGGAGCTGG
TGGTGGATGGAGGGATTACTTCTTCTACAGGGAGAGTATAAATAGATACC
ATACTACGAATTGCTCCATGTATTTGATGTAGCAGGCTACTATGGTTTAA
CTGCGCGTTGCATCTGCACGGGCTATGTCCCGAGAATACATTTACTATTC
TGTA back to topCoding sequence (CDS) from alignment at ch7:256140..257143+ >KJC3_009387-T1 ID=KJC3_009387-T1|Name=KJC3_009387-T1|organism=Aspergillus niger KJC3|type=CDS|length=810bp|location=Sequence derived from alignment at ch7:256140..257143+ (Aspergillus niger KJC3)
ATGCTACGTCTTGACGGCAAAGTCGCCCTTATCACCGGCCTCGGCCAGAC
CACCGACGAAGGCTGGGGTATCGGTGCCGCCATCGCCATGAAACTCTCCC
AGCAAGGCGCAATTATTTTCGGAGGCAATCGCACATTATCCAGTGCCGAA
AGAACAAAAGCCCGAATTGAAAAGGAGGGCGGAACATGCGAAGTCCAAGA
AACAAACGTCACAGATTCCACATCCGTCAAAGCTCTCGTGGATAGCTGCA
TGCAACGCCACGGGCGCATCGACATCCTGATCAACAACGTGGGAAAATCG
GAGCCAGGTGGCCCTGCCGAGCTAAGCGAGGAAACGTGGGACCAACAAGT
TGATCTGAACCTGAAAAGCGTCTATCTGACGAGTCATTTTGTGCTTCCTA
TTATGGAGAAGCAGGAGACGGGCGGCACGGTGATAAATGTGTCGAGCATT
GCAGGGCTGCGGTATATCGGGAAGCCGCAGGTTGCATATTCGGCTACGAA
AGCGGCCATTATGCAGTTCACGAAGGCCACGGCGGTGATATATGCGGGGA
AGGGAGTGAGGTTGAATACTGTTGTTCCTGGGCTGATTTATACGCCGTAC
ACTCGTGACCTTGCGAAGCGGTATGCTCCTGGGGGTGATGAAGAGGCGTA
CATGAAGAAGCGCGATGAACAGGTGCCAATGGGACGCATGGGAGATGCTT
GGGATGTGGCTAATGCCACGGTGTTTCTCGCTTCGGATGAGGCACGGTAT
ATCACGGGACAGGAGCTGGTGGTGGATGGAGGGATTACTTCTTCTACAGG
GAGAGTATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009387-T1.utr5p1 | KJC3_009387-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009387-T1.utr3p1 | KJC3_009387-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.2 |
| Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:256140..257143 + |
|
