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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:269007..270729+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009394-T1 ID=KJC3_009394-T1|Name=KJC3_009394-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1723bp|location=Sequence derived from alignment at ch7:269007..270729+ (Aspergillus niger KJC3)
CTGGCATCCGAACTGGTTACCCTTCTGGGAACTGATTATCCACACATATC
CCTATTGCCATGGTCTACAGAGGGAAGCCGGGTCTGGGGTGTGCTTTATG
CAGGACACGACGGCTAATCGTACGTGGTGCGCCTCGAGGCTCTTTATGAT
CATGGCGTACTGACTTTACAGTGCGATCGACGTCGCCCGTCGTGTACACA
ATGCCTGAGGATCAACCAGGAATGCTCAGGGTATCGCGACCCCAACGTCC
TGAGAATCTGCGACCAGACCGACGAAATAACCGTGAAAGTCGAAGGTCGA
GGGACGATCGTTCGAAAACAACGCAAGTCGCCTTCTACGGGAAAACCCTC
CTCACCCGCCTCTATATCCCCTCCGCCTACCACAATTGATGATCAGGTCA
TGTCGCATATCTTCACTTACTACGTCGGTACCACACGAGTCCAGGGTCTT
CTTTCCTATCTTCCCCACCTGCTGAGCACGAACCCCTCTCCTGCACTCCA
AGCCACGATTAAAGCTGCAGGGCTGGAGAGCATGGCGAGAATCAACCGGC
GTCCCGAACTAAAGCGTGCGGCAGGGGAAGAGTACGGCAGGGCCCTGATT
GCCACTAATAACGCACTACGAGACCCAGTATCGGCGAAATCTGACTCCAC
TCTTGGGGCTGTTATCTTGCTTGGCATGTACGAGGTAAGATTAGCTCCTT
TGATTGCAGGCTCGGCTTTCTAATTGAGGGGTCAGTGGAACGCGTGCTCG
GGTCTAATGCAGGGCTGGTCGCAGCATGTCCGAGGAGCGACAAAGCTTGT
TGAACTACGCGGCATGGAGCAATTGAACTCGGAAACTGGACTCGAGTTGT
TTACATTAGTCCGTTTGCAAAATGTGAGTATTGCTCCACTCAAGTATTGG
CTCTCATCCTCATCTATATTTATCAGGCAATTAGTGGCGTCTTTATAAGA
TCTCGGAGGTACAAATCAGCCAAGATAACGGCCCTTACGAAGCTGGCACA
AGCAAAGAAGGACAGGAATTCCCAACCAATTGAGGTATTCTATGATATAC
TGATGGAACTACATGATCTCTCCGTCGAAGTGGACGACGCAGCCGTGGTC
GATGATTCAATTGGCACTCTGAGCATACTTATCAGCAAGGCGCTCCATCT
TGACACGGATCTGCGGGCCTGGGCCATGTCACTCGGTCCGCATTGGCAAT
ACTCCGTCGTTGACACACACAGTAATCCTAAATCTCGCCCCCACATTCCC
CTTCACAGCGACACCTACCATATGTACAAAGCCGTCGGGGTAGTCTCAAT
GTGGAATCATTATCGCCAAACGCGTATTATCTTACATGAGATGATCAGAT
CAATGGGTCTACGCCTCTGGGGCCTACAGGGGACATCTGAATGCCAACAA
ATCGTGTTTGACTCGATAGATACTATCAAGCAGATGACAGATGACCTCTG
CGCTAGCGTTCCATATCACTTTGTATCTGGAGAGGTGACATTCCCGGCCG
TGATTCGCCTGCTCTGGCCTTTGTTCGTTGCAGGCGACTGTGCGGGTGCG
GAACCTGCCACGAAGGAATGGATCATCCAGACTTTGGAGTTGATTGGGAA
CACGACGGGAATTCAACAGGGGCTAGGCTTAGCTCACATGCTTAGGAATG
GACATACAAGGAATTTTATCCCGGGGACATGAGGACGGAGTGTACTTTGT
GATAAATTTTTCTCGTGTTTGTG back to topCoding sequence (CDS) from alignment at ch7:269007..270729+ >KJC3_009394-T1 ID=KJC3_009394-T1|Name=KJC3_009394-T1|organism=Aspergillus niger KJC3|type=CDS|length=5868bp|location=Sequence derived from alignment at ch7:269007..270729+ (Aspergillus niger KJC3)
ATGGTCTACAGAGGGAAGCCGGGTCTGGGGTGTGCTTTATGCAGGACACG
ACGGCTAATCTGCGATCGACGTCGCCCGTCGTGTACACAATGCCTGAGGA
TCAACCAGGAATGCTCAGGGTATCGCGACCCCAACGTCCTGAGAATCTGC
GACCAGACCGACGAAATAACCGTGAAAGTCGAAGGTCGAGGGACGATCGT
TCGAAAACAACGCAAGTCGCCTTCTACGGGAAAACCCTCCTCACCCGCCT
CTATATCCCCTCCGCCTACCACAATTGATGATCAGGTCATGTCGCATATC
TTCACTTACTACGTCGGTACCACACGAGTCCAGGGTCTTCTTTCCTATCT
TCCCCACCTGCTGAGCACGAACCCCTCTCCTGCACTCCAAGCCACGATTA
AAGCTGCAGGGCTGGAGAGCATGGCGAGAATCAACCGGCGTCCCGAACTA
AAGCGTGCGGCAGGGGAAGAGTACGGCAGGGCCCTGATTGCCACTAATAA
CGCACTACGAGACCCAGTATCGGCGAAATCTGACTCCACTCTTGGGGCTG
TTATCTTGCTTGGCATGTACGAGTGGAACGCGTGCTCGGGTCTAATGCAG
GGCTGGTCGCAGCATGTCCGAGGAGCGACAAAGCTTGTTGAACTACGCGG
CATGGAGCAATTGAACTCGGAAACTGGACTCGAGTTGTTTACATTAGTCC
GTTTGCAAAATGCAATTAGTGGCGTCTTTATAAGATCTCGGAGGTACAAA
TCAGCCAAGATAACGGCCCTTACGAAGCTGGCACAAGCAAAGAAGGACAG
GAATTCCCAACCAATTGAGGTATTCTATGATATACTGATGGAACTACATG
ATCTCTCCGTCGAAGTGGACGACGCAGCCGTGGTCGATGATTCAATTGGC
ACTCTGAGCATACTTATCAGCAAGGCGCTCCATCTTGACACGGATCTGCG
GGCCTGGGCCATGTCACTCGGTCCGCATTGGCAATACTCCGTCGTTGACA
CACACAGTAATCCTAAATCTCGCCCCCACATTCCCCTTCACAGCGACACC
TACCATATGTACAAAGCCGTCGGGGTAGTCTCAATGTGGAATCATTATCG
CCAAACGCGTATTATCTTACATGAGATGATCAGATCAATGGGTCTACGCC
TCTGGGGCCTACAGGGGACATCTGAATGCCAACAAATCGTGTTTGACTCG
ATAGATACTATCAAGCAGATGACAGATGACCTCTGCGCTAGCGTTCCATA
TCACTTTGTATCTGGAGAGGTGACATTCCCGGCCGTGATTCGCCTGCTCT
GGCCTTTGTTCGTTGCAGGCGACTGTGCGGGTGCGGAACCTGCCACGAAG
GAATGGATCATCCAGACTTTGGAGTTGATTGGGAACACGACGGGAATTCA
ACAGGGGCTAGGCTTAGCTCACATGCTTAGGAATGGACATACAAGGAATT
TTATCCCGGGGACATGAATGGTCTACAGAGGGAAGCCGGGTCTGGGGTGT
GCTTTATGCAGGACACGACGGCTAATCTGCGATCGACGTCGCCCGTCGTG
TACACAATGCCTGAGGATCAACCAGGAATGCTCAGGGTATCGCGACCCCA
ACGTCCTGAGAATCTGCGACCAGACCGACGAAATAACCGTGAAAGTCGAA
GGTCGAGGGACGATCGTTCGAAAACAACGCAAGTCGCCTTCTACGGGAAA
ACCCTCCTCACCCGCCTCTATATCCCCTCCGCCTACCACAATTGATGATC
AGGTCATGTCGCATATCTTCACTTACTACGTCGGTACCACACGAGTCCAG
GGTCTTCTTTCCTATCTTCCCCACCTGCTGAGCACGAACCCCTCTCCTGC
ACTCCAAGCCACGATTAAAGCTGCAGGGCTGGAGAGCATGGCGAGAATCA
ACCGGCGTCCCGAACTAAAGCGTGCGGCAGGGGAAGAGTACGGCAGGGCC
CTGATTGCCACTAATAACGCACTACGAGACCCAGTATCGGCGAAATCTGA
CTCCACTCTTGGGGCTGTTATCTTGCTTGGCATGTACGAGTGGAACGCGT
GCTCGGGTCTAATGCAGGGCTGGTCGCAGCATGTCCGAGGAGCGACAAAG
CTTGTTGAACTACGCGGCATGGAGCAATTGAACTCGGAAACTGGACTCGA
GTTGTTTACATTAGTCCGTTTGCAAAATGCAATTAGTGGCGTCTTTATAA
GATCTCGGAGGTACAAATCAGCCAAGATAACGGCCCTTACGAAGCTGGCA
CAAGCAAAGAAGGACAGGAATTCCCAACCAATTGAGGTATTCTATGATAT
ACTGATGGAACTACATGATCTCTCCGTCGAAGTGGACGACGCAGCCGTGG
TCGATGATTCAATTGGCACTCTGAGCATACTTATCAGCAAGGCGCTCCAT
CTTGACACGGATCTGCGGGCCTGGGCCATGTCACTCGGTCCGCATTGGCA
ATACTCCGTCGTTGACACACACAGTAATCCTAAATCTCGCCCCCACATTC
CCCTTCACAGCGACACCTACCATATGTACAAAGCCGTCGGGGTAGTCTCA
ATGTGGAATCATTATCGCCAAACGCGTATTATCTTACATGAGATGATCAG
ATCAATGGGTCTACGCCTCTGGGGCCTACAGGGGACATCTGAATGCCAAC
AAATCGTGTTTGACTCGATAGATACTATCAAGCAGATGACAGATGACCTC
TGCGCTAGCGTTCCATATCACTTTGTATCTGGAGAGGTGACATTCCCGGC
CGTGATTCGCCTGCTCTGGCCTTTGTTCGTTGCAGGCGACTGTGCGGGTG
CGGAACCTGCCACGAAGGAATGGATCATCCAGACTTTGGAGTTGATTGGG
AACACGACGGGAATTCAACAGGGGCTAGGCTTAGCTCACATGCTTAGGAA
TGGACATACAAGGAATTTTATCCCGGGGACATGAATGGTCTACAGAGGGA
AGCCGGGTCTGGGGTGTGCTTTATGCAGGACACGACGGCTAATCTGCGAT
CGACGTCGCCCGTCGTGTACACAATGCCTGAGGATCAACCAGGAATGCTC
AGGGTATCGCGACCCCAACGTCCTGAGAATCTGCGACCAGACCGACGAAA
TAACCGTGAAAGTCGAAGGTCGAGGGACGATCGTTCGAAAACAACGCAAG
TCGCCTTCTACGGGAAAACCCTCCTCACCCGCCTCTATATCCCCTCCGCC
TACCACAATTGATGATCAGGTCATGTCGCATATCTTCACTTACTACGTCG
GTACCACACGAGTCCAGGGTCTTCTTTCCTATCTTCCCCACCTGCTGAGC
ACGAACCCCTCTCCTGCACTCCAAGCCACGATTAAAGCTGCAGGGCTGGA
GAGCATGGCGAGAATCAACCGGCGTCCCGAACTAAAGCGTGCGGCAGGGG
AAGAGTACGGCAGGGCCCTGATTGCCACTAATAACGCACTACGAGACCCA
GTATCGGCGAAATCTGACTCCACTCTTGGGGCTGTTATCTTGCTTGGCAT
GTACGAGTGGAACGCGTGCTCGGGTCTAATGCAGGGCTGGTCGCAGCATG
TCCGAGGAGCGACAAAGCTTGTTGAACTACGCGGCATGGAGCAATTGAAC
TCGGAAACTGGACTCGAGTTGTTTACATTAGTCCGTTTGCAAAATGCAAT
TAGTGGCGTCTTTATAAGATCTCGGAGGTACAAATCAGCCAAGATAACGG
CCCTTACGAAGCTGGCACAAGCAAAGAAGGACAGGAATTCCCAACCAATT
GAGGTATTCTATGATATACTGATGGAACTACATGATCTCTCCGTCGAAGT
GGACGACGCAGCCGTGGTCGATGATTCAATTGGCACTCTGAGCATACTTA
TCAGCAAGGCGCTCCATCTTGACACGGATCTGCGGGCCTGGGCCATGTCA
CTCGGTCCGCATTGGCAATACTCCGTCGTTGACACACACAGTAATCCTAA
ATCTCGCCCCCACATTCCCCTTCACAGCGACACCTACCATATGTACAAAG
CCGTCGGGGTAGTCTCAATGTGGAATCATTATCGCCAAACGCGTATTATC
TTACATGAGATGATCAGATCAATGGGTCTACGCCTCTGGGGCCTACAGGG
GACATCTGAATGCCAACAAATCGTGTTTGACTCGATAGATACTATCAAGC
AGATGACAGATGACCTCTGCGCTAGCGTTCCATATCACTTTGTATCTGGA
GAGGTGACATTCCCGGCCGTGATTCGCCTGCTCTGGCCTTTGTTCGTTGC
AGGCGACTGTGCGGGTGCGGAACCTGCCACGAAGGAATGGATCATCCAGA
CTTTGGAGTTGATTGGGAACACGACGGGAATTCAACAGGGGCTAGGCTTA
GCTCACATGCTTAGGAATGGACATACAAGGAATTTTATCCCGGGGACATG
AATGGTCTACAGAGGGAAGCCGGGTCTGGGGTGTGCTTTATGCAGGACAC
GACGGCTAATCTGCGATCGACGTCGCCCGTCGTGTACACAATGCCTGAGG
ATCAACCAGGAATGCTCAGGGTATCGCGACCCCAACGTCCTGAGAATCTG
CGACCAGACCGACGAAATAACCGTGAAAGTCGAAGGTCGAGGGACGATCG
TTCGAAAACAACGCAAGTCGCCTTCTACGGGAAAACCCTCCTCACCCGCC
TCTATATCCCCTCCGCCTACCACAATTGATGATCAGGTCATGTCGCATAT
CTTCACTTACTACGTCGGTACCACACGAGTCCAGGGTCTTCTTTCCTATC
TTCCCCACCTGCTGAGCACGAACCCCTCTCCTGCACTCCAAGCCACGATT
AAAGCTGCAGGGCTGGAGAGCATGGCGAGAATCAACCGGCGTCCCGAACT
AAAGCGTGCGGCAGGGGAAGAGTACGGCAGGGCCCTGATTGCCACTAATA
ACGCACTACGAGACCCAGTATCGGCGAAATCTGACTCCACTCTTGGGGCT
GTTATCTTGCTTGGCATGTACGAGTGGAACGCGTGCTCGGGTCTAATGCA
GGGCTGGTCGCAGCATGTCCGAGGAGCGACAAAGCTTGTTGAACTACGCG
GCATGGAGCAATTGAACTCGGAAACTGGACTCGAGTTGTTTACATTAGTC
CGTTTGCAAAATGCAATTAGTGGCGTCTTTATAAGATCTCGGAGGTACAA
ATCAGCCAAGATAACGGCCCTTACGAAGCTGGCACAAGCAAAGAAGGACA
GGAATTCCCAACCAATTGAGGTATTCTATGATATACTGATGGAACTACAT
GATCTCTCCGTCGAAGTGGACGACGCAGCCGTGGTCGATGATTCAATTGG
CACTCTGAGCATACTTATCAGCAAGGCGCTCCATCTTGACACGGATCTGC
GGGCCTGGGCCATGTCACTCGGTCCGCATTGGCAATACTCCGTCGTTGAC
ACACACAGTAATCCTAAATCTCGCCCCCACATTCCCCTTCACAGCGACAC
CTACCATATGTACAAAGCCGTCGGGGTAGTCTCAATGTGGAATCATTATC
GCCAAACGCGTATTATCTTACATGAGATGATCAGATCAATGGGTCTACGC
CTCTGGGGCCTACAGGGGACATCTGAATGCCAACAAATCGTGTTTGACTC
GATAGATACTATCAAGCAGATGACAGATGACCTCTGCGCTAGCGTTCCAT
ATCACTTTGTATCTGGAGAGGTGACATTCCCGGCCGTGATTCGCCTGCTC
TGGCCTTTGTTCGTTGCAGGCGACTGTGCGGGTGCGGAACCTGCCACGAA
GGAATGGATCATCCAGACTTTGGAGTTGATTGGGAACACGACGGGAATTC
AACAGGGGCTAGGCTTAGCTCACATGCTTAGGAATGGACATACAAGGAAT
TTTATCCCGGGGACATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009394-T1.utr5p1 | KJC3_009394-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009394-T1.utr3p1 | KJC3_009394-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.2 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:269007..270729 + |
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