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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:288470..290070+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009396-T1 ID=KJC3_009396-T1|Name=KJC3_009396-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1601bp|location=Sequence derived from alignment at ch7:288470..290070+ (Aspergillus niger KJC3)
GTTTTCAGACTCCTCTGTCCACTGTTTCTTACTCTTAATTCTTACTTCTT
ACTTCTCTTAAGCTTATCTGGTTGTCTTTTAGCTCACTTTTCTTCCTTCC
TGGTCTCTTTTTCCCCCCATCTCCACAACGAATTTTCTTTCCCCTTCTCA
TATTCACATACCCCATTGCCCACCATGACGAACTGCACTACCGATTGGAG
CAATGTCACGCTCGCTACTTTCAACCAGACTCTACTCAATGATACCTCAT
TGTGTACGAAATGCACCTGTCCTCTCGTCCTGGACGGCGAGCAGCTGTCA
TGGGTGCGATACTACCCGAATCTGGCGGGCAACGTCCTCTACGCAGTCCT
CTTCGGCCTCTTTCTCGTGCTGCAGCTCTTCTTCGGCATCTCGCGCAAGA
CCCGGGGATACATGATTGGCATGACACTTGGTTTGATTCTTGAAGTCTTG
GGCTACGTCGGACGGATTCTCCTCCGCTACTCGATGTTCGAATTCTCATG
GTTCCTGATGTGAGTTTCCCTCTAAAATAAAACCTAAGGTGTGAAAATTA
ACAACCATGACAGGTATCTCGTTCCTCTCACCATCGCCCCGGCCTTCATC
TCCGCAGCCATCTATCTGACCCTATCGCGGATCATCACGATCTATGGCGC
CGAGCACGCTCGCTTCCGCCCCCAGGTCTACACCTACATCTTCATCACCT
TCGACATCATCGCCCTTCTTCTGCAAGCCGTGGGCGGCGCCGTCGCCTCC
GTCGCTGACGCCTACTCATCCATGCAGGACCAGGGTGTGCACGTCATGGT
CGGCGGCCTTGCGTGGCAGGTGGTGTCGCTGTTCATCTTCTCGTGCCTGG
GTCTGGACTTCTATCTGCGCGTGAGCCGGGCTAGCCGCAAAGGAGTCCCT
CTCAACCCGGCGTTTGATTCGCTACGCGCACAGCGGTCCTTCGAGCCGTG
GTTCATTGTGTCCCTGTCTCTGGCCGTCTTGTTTATCTTTGTGCGGAGTG
TGTTCCGGTGTGCTGAGCTACAGGGTGGATTTGGCGGCAAGTTGGCCAAT
GAGGAGATTACGTTCATGGTGCTGGAGGGAGCGATGATGGTGCTGGCTTG
TGGGTTGTTGACTTTCTTCCACCCCGGGTTGATTTTGGGGGCTAGGGAAT
GGGCGCTGGCTAAGTGGAGTCGCGGTGGTAAGGGGGTCTAGATCAGATTC
ATTTTCTTTGGGGAATGAGGCTGAGTGCAGGGGATTGAGGGGGGATGTGA
CTGGGGTGATGTGTATGAGGTGGTTACGTGGAAGAGTTTGTTTGCTTGCT
TGCTTTCTTTCCTTACGGGTATTAGGCTTAGGCTTGGCTGGTCTTGGCTT
CGGGTTCTTTGTTTTTTGCTTTTCAGCCTTGCGGGTTGTTTGTGGGCAGG
GGATGAGTGAATGACAGCTCAGACGCGAGTGTTATCAAGGGCTAGACCCG
CTCATCGGAAGAGATACCTTTTTATTTTGCCTGTATTCACTAATAGACTG
GACATTTCATGGAAAATTGCTTTGAGACGTATTCTGATAATGAGATAAGA
AATGATTAACATCTCTTGGACGAACTGCTTCGGATAATTAGAGGTCGATC
A back to topCoding sequence (CDS) from alignment at ch7:288470..290070+ >KJC3_009396-T1 ID=KJC3_009396-T1|Name=KJC3_009396-T1|organism=Aspergillus niger KJC3|type=CDS|length=1926bp|location=Sequence derived from alignment at ch7:288470..290070+ (Aspergillus niger KJC3)
ATGACGAACTGCACTACCGATTGGAGCAATGTCACGCTCGCTACTTTCAA
CCAGACTCTACTCAATGATACCTCATTGTGTACGAAATGCACCTGTCCTC
TCGTCCTGGACGGCGAGCAGCTGTCATGGGTGCGATACTACCCGAATCTG
GCGGGCAACGTCCTCTACGCAGTCCTCTTCGGCCTCTTTCTCGTGCTGCA
GCTCTTCTTCGGCATCTCGCGCAAGACCCGGGGATACATGATTGGCATGA
CACTTGGTTTGATTCTTGAAGTCTTGGGCTACGTCGGACGGATTCTCCTC
CGCTACTCGATGTTCGAATTCTCATGGTTCCTGATGTATCTCGTTCCTCT
CACCATCGCCCCGGCCTTCATCTCCGCAGCCATCTATCTGACCCTATCGC
GGATCATCACGATCTATGGCGCCGAGCACGCTCGCTTCCGCCCCCAGGTC
TACACCTACATCTTCATCACCTTCGACATCATCGCCCTTCTTCTGCAAGC
CGTGGGCGGCGCCGTCGCCTCCGTCGCTGACGCCTACTCATCCATGCAGG
ACCAGGGTGTGCACGTCATGGTCGGCGGCCTTGCGTGGCAGGTGGTGTCG
CTGTTCATCTTCTCGTGCCTGGGTCTGGACTTCTATCTGCGCGTGAGCCG
GGCTAGCCGCAAAGGAGTCCCTCTCAACCCGGCGTTTGATTCGCTACGCG
CACAGCGGTCCTTCGAGCCGTGGTTCATTGTGTCCCTGTCTCTGGCCGTC
TTGTTTATCTTTGTGCGGAGTGTGTTCCGGTGTGCTGAGCTACAGGGTGG
ATTTGGCGGCAAGTTGGCCAATGAGGAGATTACGTTCATGGTGCTGGAGG
GAGCGATGATGGTGCTGGCTTGTGGGTTGTTGACTTTCTTCCACCCCGGG
TTGATTTTGGGGGCTAGGGAATGGGCGCTGGCTAAGTGGAGTCGCGGTGG
TAAGGGGGTCTAGATGACGAACTGCACTACCGATTGGAGCAATGTCACGC
TCGCTACTTTCAACCAGACTCTACTCAATGATACCTCATTGTGTACGAAA
TGCACCTGTCCTCTCGTCCTGGACGGCGAGCAGCTGTCATGGGTGCGATA
CTACCCGAATCTGGCGGGCAACGTCCTCTACGCAGTCCTCTTCGGCCTCT
TTCTCGTGCTGCAGCTCTTCTTCGGCATCTCGCGCAAGACCCGGGGATAC
ATGATTGGCATGACACTTGGTTTGATTCTTGAAGTCTTGGGCTACGTCGG
ACGGATTCTCCTCCGCTACTCGATGTTCGAATTCTCATGGTTCCTGATGT
ATCTCGTTCCTCTCACCATCGCCCCGGCCTTCATCTCCGCAGCCATCTAT
CTGACCCTATCGCGGATCATCACGATCTATGGCGCCGAGCACGCTCGCTT
CCGCCCCCAGGTCTACACCTACATCTTCATCACCTTCGACATCATCGCCC
TTCTTCTGCAAGCCGTGGGCGGCGCCGTCGCCTCCGTCGCTGACGCCTAC
TCATCCATGCAGGACCAGGGTGTGCACGTCATGGTCGGCGGCCTTGCGTG
GCAGGTGGTGTCGCTGTTCATCTTCTCGTGCCTGGGTCTGGACTTCTATC
TGCGCGTGAGCCGGGCTAGCCGCAAAGGAGTCCCTCTCAACCCGGCGTTT
GATTCGCTACGCGCACAGCGGTCCTTCGAGCCGTGGTTCATTGTGTCCCT
GTCTCTGGCCGTCTTGTTTATCTTTGTGCGGAGTGTGTTCCGGTGTGCTG
AGCTACAGGGTGGATTTGGCGGCAAGTTGGCCAATGAGGAGATTACGTTC
ATGGTGCTGGAGGGAGCGATGATGGTGCTGGCTTGTGGGTTGTTGACTTT
CTTCCACCCCGGGTTGATTTTGGGGGCTAGGGAATGGGCGCTGGCTAAGT
GGAGTCGCGGTGGTAAGGGGGTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009396-T1.utr5p1 | KJC3_009396-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009396-T1.utr3p1 | KJC3_009396-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.2 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:288470..290070 + |
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