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KJC3_009398-T1, KJC3_009398-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009398-T1
Unique NameKJC3_009398-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:293575..295117-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009398-T1 ID=KJC3_009398-T1|Name=KJC3_009398-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1543bp|location=Sequence derived from alignment at ch7:293575..295117- (Aspergillus niger KJC3)
GGGGGATCGACATGATCAGAGAGTTCCAAGCACATGGCGTTTTTCCCGAT
AAGCATCCAGTGTTGGTTCGTGTTTGTCTTGCATTGTTTCATCGCTTACC
ACTAGCTGCAGATTATAATCCAAAATTAGCATCTTTCACATCGTCCGCCT
TCGTCCTTCATCATTCCCACTTCTTAGTTCTTACTCACCACCCAGTAAAC
AGTTCCCGTCAGAAATCGTGAATAAGCCCTGAGAACGCCTACTAACTCGC
TGACTACCACCAGCGTAGTAATCACCCCAGTAGTCAACTCTCTAGAATTT
TCACAACTTAACCAGTCCAACCTACATATTCATCCCTCCAAACTCAGTCT
CTAAATTCATTCATTCATGTTACCTCATACCATCCCGGCCCATCGCAAGT
CCAGCCACACGAGCAACTCTACGCAATCACCATGCTTCTCTTCCTCTTTG
CAGTCCCCGTCCTCCTCCTCCTAACCAACGCCAAATCCCTCCCACTCACA
TACTCTCTCCAACTCCTCCCATCCCTCTACCGAATCCTGCAACCCCGCCT
CTCGCGCAACGCTCCACGACCCAAAGAGCTCGTATCCCCGCAACCAATCA
GCAACCCAAAGCTCTTCTATCCAGCCCTACCCAGCCTTTTCCGCCCCCAC
ACAACTCAAACCCACTGCCCCCTGCCGGAAATCGACCTGAACCTACACAA
AAGCAACAGCACTTTCTTCACAGATGCGGACCTCAGCCGCGCCCGCCTCC
TCAGTCGTCTCCTGGGGCCAGCCTTGGCAGCAACCGGCGGAATGCCCATG
CTGGCTGCCGTGCAGGCGCGGTTCTTGCGCGAGATCCGCCCCTTTCAGCG
GTATCGCGTTACATCTCGGATCCTGGCGTGGGATCAGCGGTCGTTGTGGA
CGGTTACGTATTTCTTGCGGGGAGATGAGTACAGGGGCATGATGGAGGTG
GATCTACTTGGTGGAGGGCCCGCAGCGGTGCTAAGGGATGAGAAGCTTCG
CAAGGGGGTGTTGGCTGTGCTGGTGAGTCGGTATGTGGTTAAGGCTGGAC
GAGTGACGGTGCCTCCTGTGGAGGTGTTCAAGCGGGCGGGGTTGTTAATT
GGTGGTGATTATGATGATGAGGAGAAGTGTGATGACTTTAGTCATTCTAA
TTGGGGTATCTTTGCTAGCGGTGTTGAGAAGGAGAAAGAGGAGGATTCGC
TTGTGCGAACGGGAAGTAAGATTGGGAGTACTAGCATGAAGACCAAGATC
CACCCGAAGGATGAAGAAATCTGGCCTGCAGACCGTGTGGAGGAGGTGAT
TGGGTCTGCGATGGCGTTCATCGGAGAATGCATGCTCTAGGCACATGGCG
CCACATGGCGATGGGTTACAAGGGAAAGGAACACCTTTTTTGCTTTTGTG
AAGAGAATACAGGGTGCGGGGTTCAGCAGTTCTGTACACCATGTTGCTAT
TGCTTTTTTCTTCTTATCTTGTATTTAGTACGCAGGGAAGTATGCAGGTC
TAAGCCGTCAGTATGATATCACAAGATGTAGTCTATCCCCTTC
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Coding sequence (CDS) from alignment at ch7:293575..295117-

>KJC3_009398-T1 ID=KJC3_009398-T1|Name=KJC3_009398-T1|organism=Aspergillus niger KJC3|type=CDS|length=909bp|location=Sequence derived from alignment at ch7:293575..295117- (Aspergillus niger KJC3)
ATGCTTCTCTTCCTCTTTGCAGTCCCCGTCCTCCTCCTCCTAACCAACGC
CAAATCCCTCCCACTCACATACTCTCTCCAACTCCTCCCATCCCTCTACC
GAATCCTGCAACCCCGCCTCTCGCGCAACGCTCCACGACCCAAAGAGCTC
GTATCCCCGCAACCAATCAGCAACCCAAAGCTCTTCTATCCAGCCCTACC
CAGCCTTTTCCGCCCCCACACAACTCAAACCCACTGCCCCCTGCCGGAAA
TCGACCTGAACCTACACAAAAGCAACAGCACTTTCTTCACAGATGCGGAC
CTCAGCCGCGCCCGCCTCCTCAGTCGTCTCCTGGGGCCAGCCTTGGCAGC
AACCGGCGGAATGCCCATGCTGGCTGCCGTGCAGGCGCGGTTCTTGCGCG
AGATCCGCCCCTTTCAGCGGTATCGCGTTACATCTCGGATCCTGGCGTGG
GATCAGCGGTCGTTGTGGACGGTTACGTATTTCTTGCGGGGAGATGAGTA
CAGGGGCATGATGGAGGTGGATCTACTTGGTGGAGGGCCCGCAGCGGTGC
TAAGGGATGAGAAGCTTCGCAAGGGGGTGTTGGCTGTGCTGGTGAGTCGG
TATGTGGTTAAGGCTGGACGAGTGACGGTGCCTCCTGTGGAGGTGTTCAA
GCGGGCGGGGTTGTTAATTGGTGGTGATTATGATGATGAGGAGAAGTGTG
ATGACTTTAGTCATTCTAATTGGGGTATCTTTGCTAGCGGTGTTGAGAAG
GAGAAAGAGGAGGATTCGCTTGTGCGAACGGGAAGTAAGATTGGGAGTAC
TAGCATGAAGACCAAGATCCACCCGAAGGATGAAGAAATCTGGCCTGCAG
ACCGTGTGGAGGAGGTGATTGGGTCTGCGATGGCGTTCATCGGAGAATGC
ATGCTCTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009398KJC3_009398Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009398-T1KJC3_009398-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009398-T1.cdsKJC3_009398-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009398-T1.utr3p1KJC3_009398-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009398-T1.exon2KJC3_009398-T1.exon2Aspergillus niger KJC3exon
KJC3_009398-T1.exon1KJC3_009398-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009398-T1.utr5p2KJC3_009398-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_009398-T1.utr5p1KJC3_009398-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_7.2
NoteSECRETED:SignalP(1-17)
DBxrefInterPro:IPR029069
DBxrefPFAM:PF13279
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:293575..295117 -
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