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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:295205..296734- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009399-T1 ID=KJC3_009399-T1|Name=KJC3_009399-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1530bp|location=Sequence derived from alignment at ch7:295205..296734- (Aspergillus niger KJC3)
CCCCAAGATTGATGACTTCTACCCGACTAAGACGTTTCTAAAGGATCTTA
AATATATAAGAAAAGAAGAACGGGAAACAGGATCCAATATTCATCATCAT
CCTTCTCCCAAATTAACTTTACCAATCTCACACCCTCCCAATTTAATACA
CCCAACCAGAAACAATGGGATCCCTTTCGCCATTCCCTCCCGCGCCCAAA
GCGGGCCTTGGTGAGCACTAAGAGAATCCCCCACATTCCCCTCCTCCAAC
CACAGCCTCCAATATGCACGCAATCAAAATCCCTAGACTAATGACAAACA
TCTTAGACTGGGCCAACTTGGACATGACTAAACATCTTCCTGTCAACGGC
CACGTTGAGCTCCGCTTCCACCAATCCACCCAATCCTGGACCTCCCCGTC
ACTGGTGACAGGAAACCAGATCTCCATCTCCGGCCTTTGCCCGGGCCTCA
ACTACGGCCAACAATGCTACGAGGGACTGAAGGCTGTGCGCCGCCGCCAC
CGCCGTCGTGACTCCCTGCAGGAAGAAGAGTCTATCGCTGTCTTCCGACC
CACCTTCCACGCCGCGCGCATGGCCCGCTCTGCTGCCGCTGTCTGTCTGC
CACAGGTCCCGGAGCATCTCTTTCTCGAGTGCATCCGCCTCGCGGTGGCT
GCCAACGCTGAGTATGTACCCCCCGTCGACGCGGAGGGGTTCTTGTACAT
CCGGCCAGTCTTGTTCGGCGCGTCGGATGGCTTACCCTTGGGTCCGTGTG
AGGAGACCATTTTCGCGGTCTACTGCCACCCGGCGCGGGCGTACCATGGG
ATGCAGGGGATCAAGGGCTTGGTATGCGAAGAGTTTGATCGGGCGGCGCC
CAGGGGGATGGGTCGGTTTAAGGTCGGAGGGAATTACGCCCCGGTGTGGC
GCCATGCGGGGAAGGCGATGAAGATGGGTTATCATATCACGCTACACCTC
GACAGTGAGACCCATTCCCTCGTGGAGGAATTTGCCACGAGTGGATTCCT
GGGTCACAAGGTCGTGGATGGGCAGGATGTGCTGGTCGTGCCGGAGTCAG
AGAACGCGATCGAGAGCGTCACCGGCTCGAGTCTCGAGTTCCTTGCCAAG
AGAGAGGGCTGGAAGGTGGACAAGGCGCCTGTAAGTTTCTTCAAGTTTGT
CTTGAGTTTAATTTTTTTTTTTTTTCTTTTCTCTGTGGATCCGGTGGGCT
GACAGATCTCACATCAGCTCCCATTCTCCTCACTGGGCGAGTTGGATGAA
GTCATTGCCGTTGGCACTGCCGCCGCCGCGGTACCGGTTGCTTCCATCGA
TCGACTGTCAACAGGCGAAAAGTATGCCTTCAAGGCGACCGGGGAGGGAA
AGCTGCTTGATCTCGCCCGCATCATGCGCGGCATCCAGAAGGGACAGCAG
CCAGACAGTGAGGACTGGTGTTTCGAGGTGACGGGATTTTGAGTGTATCA
GATTAAGGGTTAGACATAGAAATTGTTAGTAAAGATTATGTAAAGTTAAT
TATAAACAACAAGATGTTGGTTGAACATGG back to topCoding sequence (CDS) from alignment at ch7:295205..296734- >KJC3_009399-T1 ID=KJC3_009399-T1|Name=KJC3_009399-T1|organism=Aspergillus niger KJC3|type=CDS|length=2184bp|location=Sequence derived from alignment at ch7:295205..296734- (Aspergillus niger KJC3)
CTCCCATTCTCCTCACTGGGCGAGTTGGATGAAGTCATTGCCGTTGGCAC
TGCCGCCGCCGCGGTACCGGTTGCTTCCATCGATCGACTGTCAACAGGCG
AAAAGTATGCCTTCAAGGCGACCGGGGAGGGAAAGCTGCTTGATCTCGCC
CGCATCATGCGCGGCATCCAGAAGGGACAGCAGCCAGACAGTGAGGACTG
GTGTTTCGAGGTGACGGGATTTTGAATGCACGCAATCAAAATCCCTAGAC
TAATGACAAACATCTTAGACTGGGCCAACTTGGACATGACTAAACATCTT
CCTGTCAACGGCCACGTTGAGCTCCGCTTCCACCAATCCACCCAATCCTG
GACCTCCCCGTCACTGGTGACAGGAAACCAGATCTCCATCTCCGGCCTTT
GCCCGGGCCTCAACTACGGCCAACAATGCTACGAGGGACTGAAGGCTGTG
CGCCGCCGCCACCGCCGTCGTGACTCCCTGCAGGAAGAAGAGTCTATCGC
TGTCTTCCGACCCACCTTCCACGCCGCGCGCATGGCCCGCTCTGCTGCCG
CTGTCTGTCTGCCACAGGTCCCGGAGCATCTCTTTCTCGAGTGCATCCGC
CTCGCGGTGGCTGCCAACGCTGAGTATGTACCCCCCGTCGACGCGGAGGG
GTTCTTGTACATCCGGCCAGTCTTGTTCGGCGCGTCGGATGGCTTACCCT
TGGGTCCGTGTGAGGAGACCATTTTCGCGGTCTACTGCCACCCGGCGCGG
GCGTACCATGGGATGCAGGGGATCAAGGGCTTGGTATGCGAAGAGTTTGA
TCGGGCGGCGCCCAGGGGGATGGGTCGGTTTAAGGTCGGAGGGAATTACG
CCCCGGTGTGGCGCCATGCGGGGAAGGCGATGAAGATGGGTTATCATATC
ACGCTACACCTCGACAGTGAGACCCATTCCCTCGTGGAGGAATTTGCCAC
GAGTGGATTCCTGGGTCACAAGGTCGTGGATGGGCAGGATGTGCTGGTCG
TGCCGGAGTCAGAGAACGCGATCGAGAGCGTCACCGGCTCGAGTCTCGAG
TTCCTTGCCAAGAGAGAGGGCTGGAAGGTGGACAAGGCGCCTCTCCCATT
CTCCTCACTGGGCGAGTTGGATGAAGTCATTGCCGTTGGCACTGCCGCCG
CCGCGGTACCGGTTGCTTCCATCGATCGACTGTCAACAGGCGAAAAGTAT
GCCTTCAAGGCGACCGGGGAGGGAAAGCTGCTTGATCTCGCCCGCATCAT
GCGCGGCATCCAGAAGGGACAGCAGCCAGACAGTGAGGACTGGTGTTTCG
AGGTGACGGGATTTTGAATGCACGCAATCAAAATCCCTAGACTAATGACA
AACATCTTAGACTGGGCCAACTTGGACATGACTAAACATCTTCCTGTCAA
CGGCCACGTTGAGCTCCGCTTCCACCAATCCACCCAATCCTGGACCTCCC
CGTCACTGGTGACAGGAAACCAGATCTCCATCTCCGGCCTTTGCCCGGGC
CTCAACTACGGCCAACAATGCTACGAGGGACTGAAGGCTGTGCGCCGCCG
CCACCGCCGTCGTGACTCCCTGCAGGAAGAAGAGTCTATCGCTGTCTTCC
GACCCACCTTCCACGCCGCGCGCATGGCCCGCTCTGCTGCCGCTGTCTGT
CTGCCACAGGTCCCGGAGCATCTCTTTCTCGAGTGCATCCGCCTCGCGGT
GGCTGCCAACGCTGAGTATGTACCCCCCGTCGACGCGGAGGGGTTCTTGT
ACATCCGGCCAGTCTTGTTCGGCGCGTCGGATGGCTTACCCTTGGGTCCG
TGTGAGGAGACCATTTTCGCGGTCTACTGCCACCCGGCGCGGGCGTACCA
TGGGATGCAGGGGATCAAGGGCTTGGTATGCGAAGAGTTTGATCGGGCGG
CGCCCAGGGGGATGGGTCGGTTTAAGGTCGGAGGGAATTACGCCCCGGTG
TGGCGCCATGCGGGGAAGGCGATGAAGATGGGTTATCATATCACGCTACA
CCTCGACAGTGAGACCCATTCCCTCGTGGAGGAATTTGCCACGAGTGGAT
TCCTGGGTCACAAGGTCGTGGATGGGCAGGATGTGCTGGTCGTGCCGGAG
TCAGAGAACGCGATCGAGAGCGTCACCGGCTCGAGTCTCGAGTTCCTTGC
CAAGAGAGAGGGCTGGAAGGTGGACAAGGCGCCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009081 | branched-chain amino acid metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0004084 | branched-chain-amino-acid transaminase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009399-T1.utr3p1 | KJC3_009399-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009399-T1.utr5p1 | KJC3_009399-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.2 |
| DBxref | InterPro:IPR036038 |
| DBxref | InterPro:IPR043132 |
| DBxref | InterPro:IPR043131 |
| DBxref | InterPro:IPR001544 |
| DBxref | InterPro:IPR005786 |
| DBxref | PFAM:PF01063 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:295205..296734 - |
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