You are here

Home

KJC3_009439-T1, KJC3_009439-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009439-T1
Unique NameKJC3_009439-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:400804..401818-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009439-T1 ID=KJC3_009439-T1|Name=KJC3_009439-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1015bp|location=Sequence derived from alignment at ch7:400804..401818- (Aspergillus niger KJC3)
ATGAAAGATCAGATTAGAACCGTTGCCGTCATTGGCTGCGGTGTCATTGG
TGCGAGCTGGGCATGTCTTTTTCTCTCCCGGGGTTTGAACGTATTGATTT
ACGATCCCGCCGAAAGTGCCTGGGAAACGTTCGAGAATTACCTGCAAGAT
GCATGGCCTGCCTTGGCAGCACGCAGTCCCATTGAAGATGCCTGGGCGAA
GAACTACAAGTTCATTGACAACATGGAATTGAGCTTATCAGAAGCCGATT
TCATCCAGGAGGTAGCCCCTGCATTCTTAACGTGCTATGCTCGAGACATC
GGCTTTGCTAATGTATTGCTAGAACGGACCCGAGCGCCCCGAGTTGAAGC
AGGCGCTCATGGAAAAACTGGACCAGTATACCAGACCCGGTGTCATAATC
TCCTCTTCATCTTCTGGCCTCCCTGCATCGAGGTTCATTGGAAGATGCCA
GAAAGACCCCAGTCGCATCCTAGTTGGCCATCCATTCAATCCACCACATC
TAGTCCCCCTGGTGGAAGTTGTCCCTCACCCGGGCACCAGCGCTACCACC
ATATCTGCGGCCCAAGCCTTCTACCGGTTTCTCGGGAAGACGCCCATCCT
GCTCCACCACGAAGTCCCAGGGTTCGTAGCCAATCGTCTGCAGGCTGCGA
TCAACAGCGAAGCATACAGCCTTAACAGCCGCGGCATTGTCTCCGCCAAG
GATCTCGACACGGCAATGACATCAGGTCCGGGCCTTCGATGGGCGTTGAC
CGGTCCGTTTGTTACAAATTCGTTGGGTGGGGGAGGAGGGCCGAATGGGT
TTGCCCAGCGTGTTGAACGACTTGGCCCTGCGGTCCGAGCTTGGGAGGAA
GACATGTTGAAGCATCGGTTCGATTGGAGCGAGGAAAGCGTGTCTGTGCT
GAAGAGAGAGGCTCTTCAATGGCTAGAAACAGTGGATTGGGATGGTTTCA
ATAGGAAGAGAGATCAGATGCTGCTGAGATTGCTGGAAGTAACCTCCCAC
ACATCATCGCCCTAA
back to top

Coding sequence (CDS) from alignment at ch7:400804..401818-

>KJC3_009439-T1 ID=KJC3_009439-T1|Name=KJC3_009439-T1|organism=Aspergillus niger KJC3|type=CDS|length=1908bp|location=Sequence derived from alignment at ch7:400804..401818- (Aspergillus niger KJC3)
AACGGACCCGAGCGCCCCGAGTTGAAGCAGGCGCTCATGGAAAAACTGGA
CCAGTATACCAGACCCGGTGTCATAATCTCCTCTTCATCTTCTGGCCTCC
CTGCATCGAGGTTCATTGGAAGATGCCAGAAAGACCCCAGTCGCATCCTA
GTTGGCCATCCATTCAATCCACCACATCTAGTCCCCCTGGTGGAAGTTGT
CCCTCACCCGGGCACCAGCGCTACCACCATATCTGCGGCCCAAGCCTTCT
ACCGGTTTCTCGGGAAGACGCCCATCCTGCTCCACCACGAAGTCCCAGGG
TTCGTAGCCAATCGTCTGCAGGCTGCGATCAACAGCGAAGCATACAGCCT
TAACAGCCGCGGCATTGTCTCCGCCAAGGATCTCGACACGGCAATGACAT
CAGGTCCGGGCCTTCGATGGGCGTTGACCGGTCCGTTTGTTACAAATTCG
TTGGGTGGGGGAGGAGGGCCGAATGGGTTTGCCCAGCGTGTTGAACGACT
TGGCCCTGCGGTCCGAGCTTGGGAGGAAGACATGTTGAAGCATCGGTTCG
ATTGGAGCGAGGAAAGCGTGTCTGTGCTGAAGAGAGAGGCTCTTCAATGG
CTAGAAACAGTGGATTGGGATGGTTTCAATAGGAAGAGAGATCAGATGCT
GCTGAGATTGCTGGAAGTAACCTCCCACACATCATCGCCCTAAATGAAAG
ATCAGATTAGAACCGTTGCCGTCATTGGCTGCGGTGTCATTGGTGCGAGC
TGGGCATGTCTTTTTCTCTCCCGGGGTTTGAACGTATTGATTTACGATCC
CGCCGAAAGTGCCTGGGAAACGTTCGAGAATTACCTGCAAGATGCATGGC
CTGCCTTGGCAGCACGCAGTCCCATTGAAGATGCCTGGGCGAAGAACTAC
AAGTTCATTGACAACATGGAATTGAGCTTATCAGAAGCCGATTTCATCCA
GGAGAACGGACCCGAGCGCCCCGAGTTGAAGCAGGCGCTCATGGAAAAAC
TGGACCAGTATACCAGACCCGGTGTCATAATCTCCTCTTCATCTTCTGGC
CTCCCTGCATCGAGGTTCATTGGAAGATGCCAGAAAGACCCCAGTCGCAT
CCTAGTTGGCCATCCATTCAATCCACCACATCTAGTCCCCCTGGTGGAAG
TTGTCCCTCACCCGGGCACCAGCGCTACCACCATATCTGCGGCCCAAGCC
TTCTACCGGTTTCTCGGGAAGACGCCCATCCTGCTCCACCACGAAGTCCC
AGGGTTCGTAGCCAATCGTCTGCAGGCTGCGATCAACAGCGAAGCATACA
GCCTTAACAGCCGCGGCATTGTCTCCGCCAAGGATCTCGACACGGCAATG
ACATCAGGTCCGGGCCTTCGATGGGCGTTGACCGGTCCGTTTGTTACAAA
TTCGTTGGGTGGGGGAGGAGGGCCGAATGGGTTTGCCCAGCGTGTTGAAC
GACTTGGCCCTGCGGTCCGAGCTTGGGAGGAAGACATGTTGAAGCATCGG
TTCGATTGGAGCGAGGAAAGCGTGTCTGTGCTGAAGAGAGAGGCTCTTCA
ATGGCTAGAAACAGTGGATTGGGATGGTTTCAATAGGAAGAGAGATCAGA
TGCTGCTGAGATTGCTGGAAGTAACCTCCCACACATCATCGCCCTAAATG
AAAGATCAGATTAGAACCGTTGCCGTCATTGGCTGCGGTGTCATTGGTGC
GAGCTGGGCATGTCTTTTTCTCTCCCGGGGTTTGAACGTATTGATTTACG
ATCCCGCCGAAAGTGCCTGGGAAACGTTCGAGAATTACCTGCAAGATGCA
TGGCCTGCCTTGGCAGCACGCAGTCCCATTGAAGATGCCTGGGCGAAGAA
CTACAAGTTCATTGACAACATGGAATTGAGCTTATCAGAAGCCGATTTCA
TCCAGGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006631fatty acid metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:00038573-hydroxyacyl-CoA dehydrogenase activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009439KJC3_009439Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009439-T1KJC3_009439-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009439-T1.cdsKJC3_009439-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009439-T1.exon2KJC3_009439-T1.exon2Aspergillus niger KJC3exon
KJC3_009439-T1.exon1KJC3_009439-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR006108
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR006176
DBxrefPFAM:PF02737
DBxrefPFAM:PF00725
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:400804..401818 -
Powered by Drupal