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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:414071..415553+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009446-T1 ID=KJC3_009446-T1|Name=KJC3_009446-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1483bp|location=Sequence derived from alignment at ch7:414071..415553+ (Aspergillus niger KJC3) ATGCCGGGCAACCGCCCAAGTAAACGGCGTTCGCCACTAACACAGAAACG
ACGGCCGAAACCTAGACGAAGAGCATGCGACTCCTGTTCCAAGAAAAAGG
TATGCCATGTGTTGTTGGATACGACTCAGACCCAGTCTGACACCATATTA
CCGGGCTTGGCAGATCCAATGCGATGGAGAGTTCCCGCAGTGCAACTGGT
GCAAGCATCATAATCTCGCCTGTACCTTCAATCGAATTCGGGCGAATTCC
GACACAGGGTACGCCATGACTGCATCTAATAATGCGGCCTGATTGCGAGT
TTCACCTTTTCTGCTCCGTTTCCCCTGAATAATGCTATTTCACTCAATAT
TTCAGGCGCCGTTCAACCTTATGCATCAGTCCAAGTGGTCGTAGCTAACT
TGTTGGTAGCAACCGAGTGATTGTCGCCACACCCGACACACCTAAGGCGG
TGATCCCCAACATTGCGGATGGGCCGCAAGACCTACTTGCCCGCCCGTCA
TCCCAGGTCGCTGACTCCACGAGGTCGTCGAGGATTGGAAATACGTTCCT
CAACAATGTCACCTACCTAAGGGGGCACCATGTATTTTCAAACGAAGGCC
AGAGGTGGATTGAATCTCAGGTTGGGGAAAGCGTCAACTTTGATAAGTTG
TTCTCTCTGGAGCTCCGTTGGCTGAAGCCACTTCGATCGTATACGGTCCC
TGGGGCGAACCCCCCTGCCGGTCCGCAGCTTCCAAGTAGAGTTAGCGTGG
AAAGATATGTGCAGATATACGGCTCATCATCCCAAAGTCTTGTCTTCCCG
GTCATCAGCCAGCCCGTCTTTGGCAAAACACTGGACCTTGCCTACAGTCA
TCTCCAGCTTCCTGGTTCTAACAGCGCTAAATCATGCGTCTATGCCTTCC
TCTCACTTATTTCCCTGTTTGGCATGGATGACAACATCCACGGTGCTATG
GACTGCCAGTCTTATGCATCAGTGGCACAGAGCTTTCAGATCCCGGTGAT
TGAGGAGATGACAGTCGACGGGTTGCAGACATTGATCATGCTGGTATGTA
CAAGGCCTTCCCCATGATCCATGTTTTAAATAGCCAACAAAGCCACCAGG
TACAAGTTCAATACTTTCTGGGAGATCTTCAGTCAGCAGCGGCGACATTG
TCTATTGCCACGCGTCTTCTGTACACACTGGAAGCCCATACCACCCCCAC
CAATAAGCCCTCTACCCCGTATGATAAAGGTGATTTGAGATGTCACCTAC
GTGATCTCTTCTGGCTCTGCTACTCCTTTGACAAAGACATATGTCTGAGA
ACGGGCCAGCCACCTTGTATAAACGATGCACATTGTGACCTTACCATGCC
TCCTGATTATGTGCGACTGCATGATCTCAATCTCCAACAGAGTTTGCCAC
AGGTCGACGAGCATCTGGTTCCACTTTTCCCATGGGATCTCCGTCTCTCA
ATGCTCAAATCAAAAGTGTACGAGGATCTTTGA back to topCoding sequence (CDS) from alignment at ch7:414071..415553+ >KJC3_009446-T1 ID=KJC3_009446-T1|Name=KJC3_009446-T1|organism=Aspergillus niger KJC3|type=CDS|length=4848bp|location=Sequence derived from alignment at ch7:414071..415553+ (Aspergillus niger KJC3) ATGCCGGGCAACCGCCCAAGTAAACGGCGTTCGCCACTAACACAGAAACG ACGGCCGAAACCTAGACGAAGAGCATGCGACTCCTGTTCCAAGAAAAAGA TCCAATGCGATGGAGAGTTCCCGCAGTGCAACTGGTGCAAGCATCATAAT CTCGCCTGTACCTTCAATCGAATTCGGGCGAATTCCGACACAGGCAACCG AGTGATTGTCGCCACACCCGACACACCTAAGGCGGTGATCCCCAACATTG CGGATGGGCCGCAAGACCTACTTGCCCGCCCGTCATCCCAGGTCGCTGAC TCCACGAGGTCGTCGAGGATTGGAAATACGTTCCTCAACAATGTCACCTA CCTAAGGGGGCACCATGTATTTTCAAACGAAGGCCAGAGGTGGATTGAAT CTCAGGTTGGGGAAAGCGTCAACTTTGATAAGTTGTTCTCTCTGGAGCTC CGTTGGCTGAAGCCACTTCGATCGTATACGGTCCCTGGGGCGAACCCCCC TGCCGGTCCGCAGCTTCCAAGTAGAGTTAGCGTGGAAAGATATGTGCAGA TATACGGCTCATCATCCCAAAGTCTTGTCTTCCCGGTCATCAGCCAGCCC GTCTTTGGCAAAACACTGGACCTTGCCTACAGTCATCTCCAGCTTCCTGG TTCTAACAGCGCTAAATCATGCGTCTATGCCTTCCTCTCACTTATTTCCC TGTTTGGCATGGATGACAACATCCACGGTGCTATGGACTGCCAGTCTTAT GCATCAGTGGCACAGAGCTTTCAGATCCCGGTGATTGAGGAGATGACAGT CGACGGGTTGCAGACATTGATCATGCTGGTACAAGTTCAATACTTTCTGG GAGATCTTCAGTCAGCAGCGGCGACATTGTCTATTGCCACGCGTCTTCTG TACACACTGGAAGCCCATACCACCCCCACCAATAAGCCCTCTACCCCGTA TGATAAAGGTGATTTGAGATGTCACCTACGTGATCTCTTCTGGCTCTGCT ACTCCTTTGACAAAGACATATGTCTGAGAACGGGCCAGCCACCTTGTATA AACGATGCACATTGTGACCTTACCATGCCTCCTGATTATGTGCGACTGCA TGATCTCAATCTCCAACAGAGTTTGCCACAGGTCGACGAGCATCTGGTTC CACTTTTCCCATGGGATCTCCGTCTCTCAATGCTCAAATCAAAAGTGTAC GAGGATCTTTGAATGCCGGGCAACCGCCCAAGTAAACGGCGTTCGCCACT AACACAGAAACGACGGCCGAAACCTAGACGAAGAGCATGCGACTCCTGTT CCAAGAAAAAGATCCAATGCGATGGAGAGTTCCCGCAGTGCAACTGGTGC AAGCATCATAATCTCGCCTGTACCTTCAATCGAATTCGGGCGAATTCCGA CACAGGCAACCGAGTGATTGTCGCCACACCCGACACACCTAAGGCGGTGA TCCCCAACATTGCGGATGGGCCGCAAGACCTACTTGCCCGCCCGTCATCC CAGGTCGCTGACTCCACGAGGTCGTCGAGGATTGGAAATACGTTCCTCAA CAATGTCACCTACCTAAGGGGGCACCATGTATTTTCAAACGAAGGCCAGA GGTGGATTGAATCTCAGGTTGGGGAAAGCGTCAACTTTGATAAGTTGTTC TCTCTGGAGCTCCGTTGGCTGAAGCCACTTCGATCGTATACGGTCCCTGG GGCGAACCCCCCTGCCGGTCCGCAGCTTCCAAGTAGAGTTAGCGTGGAAA GATATGTGCAGATATACGGCTCATCATCCCAAAGTCTTGTCTTCCCGGTC ATCAGCCAGCCCGTCTTTGGCAAAACACTGGACCTTGCCTACAGTCATCT CCAGCTTCCTGGTTCTAACAGCGCTAAATCATGCGTCTATGCCTTCCTCT CACTTATTTCCCTGTTTGGCATGGATGACAACATCCACGGTGCTATGGAC TGCCAGTCTTATGCATCAGTGGCACAGAGCTTTCAGATCCCGGTGATTGA GGAGATGACAGTCGACGGGTTGCAGACATTGATCATGCTGGTACAAGTTC AATACTTTCTGGGAGATCTTCAGTCAGCAGCGGCGACATTGTCTATTGCC ACGCGTCTTCTGTACACACTGGAAGCCCATACCACCCCCACCAATAAGCC CTCTACCCCGTATGATAAAGGTGATTTGAGATGTCACCTACGTGATCTCT TCTGGCTCTGCTACTCCTTTGACAAAGACATATGTCTGAGAACGGGCCAG CCACCTTGTATAAACGATGCACATTGTGACCTTACCATGCCTCCTGATTA TGTGCGACTGCATGATCTCAATCTCCAACAGAGTTTGCCACAGGTCGACG AGCATCTGGTTCCACTTTTCCCATGGGATCTCCGTCTCTCAATGCTCAAA TCAAAAGTGTACGAGGATCTTTGAATGCCGGGCAACCGCCCAAGTAAACG GCGTTCGCCACTAACACAGAAACGACGGCCGAAACCTAGACGAAGAGCAT GCGACTCCTGTTCCAAGAAAAAGATCCAATGCGATGGAGAGTTCCCGCAG TGCAACTGGTGCAAGCATCATAATCTCGCCTGTACCTTCAATCGAATTCG GGCGAATTCCGACACAGGCAACCGAGTGATTGTCGCCACACCCGACACAC CTAAGGCGGTGATCCCCAACATTGCGGATGGGCCGCAAGACCTACTTGCC CGCCCGTCATCCCAGGTCGCTGACTCCACGAGGTCGTCGAGGATTGGAAA TACGTTCCTCAACAATGTCACCTACCTAAGGGGGCACCATGTATTTTCAA ACGAAGGCCAGAGGTGGATTGAATCTCAGGTTGGGGAAAGCGTCAACTTT GATAAGTTGTTCTCTCTGGAGCTCCGTTGGCTGAAGCCACTTCGATCGTA TACGGTCCCTGGGGCGAACCCCCCTGCCGGTCCGCAGCTTCCAAGTAGAG TTAGCGTGGAAAGATATGTGCAGATATACGGCTCATCATCCCAAAGTCTT GTCTTCCCGGTCATCAGCCAGCCCGTCTTTGGCAAAACACTGGACCTTGC CTACAGTCATCTCCAGCTTCCTGGTTCTAACAGCGCTAAATCATGCGTCT ATGCCTTCCTCTCACTTATTTCCCTGTTTGGCATGGATGACAACATCCAC GGTGCTATGGACTGCCAGTCTTATGCATCAGTGGCACAGAGCTTTCAGAT CCCGGTGATTGAGGAGATGACAGTCGACGGGTTGCAGACATTGATCATGC TGGTACAAGTTCAATACTTTCTGGGAGATCTTCAGTCAGCAGCGGCGACA TTGTCTATTGCCACGCGTCTTCTGTACACACTGGAAGCCCATACCACCCC CACCAATAAGCCCTCTACCCCGTATGATAAAGGTGATTTGAGATGTCACC TACGTGATCTCTTCTGGCTCTGCTACTCCTTTGACAAAGACATATGTCTG AGAACGGGCCAGCCACCTTGTATAAACGATGCACATTGTGACCTTACCAT GCCTCCTGATTATGTGCGACTGCATGATCTCAATCTCCAACAGAGTTTGC CACAGGTCGACGAGCATCTGGTTCCACTTTTCCCATGGGATCTCCGTCTC TCAATGCTCAAATCAAAAGTGTACGAGGATCTTTGAATGCCGGGCAACCG CCCAAGTAAACGGCGTTCGCCACTAACACAGAAACGACGGCCGAAACCTA GACGAAGAGCATGCGACTCCTGTTCCAAGAAAAAGATCCAATGCGATGGA GAGTTCCCGCAGTGCAACTGGTGCAAGCATCATAATCTCGCCTGTACCTT CAATCGAATTCGGGCGAATTCCGACACAGGCAACCGAGTGATTGTCGCCA CACCCGACACACCTAAGGCGGTGATCCCCAACATTGCGGATGGGCCGCAA GACCTACTTGCCCGCCCGTCATCCCAGGTCGCTGACTCCACGAGGTCGTC GAGGATTGGAAATACGTTCCTCAACAATGTCACCTACCTAAGGGGGCACC ATGTATTTTCAAACGAAGGCCAGAGGTGGATTGAATCTCAGGTTGGGGAA AGCGTCAACTTTGATAAGTTGTTCTCTCTGGAGCTCCGTTGGCTGAAGCC ACTTCGATCGTATACGGTCCCTGGGGCGAACCCCCCTGCCGGTCCGCAGC TTCCAAGTAGAGTTAGCGTGGAAAGATATGTGCAGATATACGGCTCATCA TCCCAAAGTCTTGTCTTCCCGGTCATCAGCCAGCCCGTCTTTGGCAAAAC ACTGGACCTTGCCTACAGTCATCTCCAGCTTCCTGGTTCTAACAGCGCTA AATCATGCGTCTATGCCTTCCTCTCACTTATTTCCCTGTTTGGCATGGAT GACAACATCCACGGTGCTATGGACTGCCAGTCTTATGCATCAGTGGCACA GAGCTTTCAGATCCCGGTGATTGAGGAGATGACAGTCGACGGGTTGCAGA CATTGATCATGCTGGTACAAGTTCAATACTTTCTGGGAGATCTTCAGTCA GCAGCGGCGACATTGTCTATTGCCACGCGTCTTCTGTACACACTGGAAGC CCATACCACCCCCACCAATAAGCCCTCTACCCCGTATGATAAAGGTGATT TGAGATGTCACCTACGTGATCTCTTCTGGCTCTGCTACTCCTTTGACAAA GACATATGTCTGAGAACGGGCCAGCCACCTTGTATAAACGATGCACATTG TGACCTTACCATGCCTCCTGATTATGTGCGACTGCATGATCTCAATCTCC AACAGAGTTTGCCACAGGTCGACGAGCATCTGGTTCCACTTTTCCCATGG GATCTCCGTCTCTCAATGCTCAAATCAAAAGTGTACGAGGATCTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006351 | transcription, DNA-templated |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0003677 | DNA binding |
GO:0008270 | zinc ion binding |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR036864 |
DBxref | InterPro:IPR007219 |
DBxref | InterPro:IPR001138 |
DBxref | PFAM:PF00172 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:414071..415553 + |
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