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KJC3_009446-T1, KJC3_009446-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009446-T1
Unique NameKJC3_009446-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:414071..415553+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009446-T1 ID=KJC3_009446-T1|Name=KJC3_009446-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1483bp|location=Sequence derived from alignment at ch7:414071..415553+ (Aspergillus niger KJC3)
ATGCCGGGCAACCGCCCAAGTAAACGGCGTTCGCCACTAACACAGAAACG
ACGGCCGAAACCTAGACGAAGAGCATGCGACTCCTGTTCCAAGAAAAAGG
TATGCCATGTGTTGTTGGATACGACTCAGACCCAGTCTGACACCATATTA
CCGGGCTTGGCAGATCCAATGCGATGGAGAGTTCCCGCAGTGCAACTGGT
GCAAGCATCATAATCTCGCCTGTACCTTCAATCGAATTCGGGCGAATTCC
GACACAGGGTACGCCATGACTGCATCTAATAATGCGGCCTGATTGCGAGT
TTCACCTTTTCTGCTCCGTTTCCCCTGAATAATGCTATTTCACTCAATAT
TTCAGGCGCCGTTCAACCTTATGCATCAGTCCAAGTGGTCGTAGCTAACT
TGTTGGTAGCAACCGAGTGATTGTCGCCACACCCGACACACCTAAGGCGG
TGATCCCCAACATTGCGGATGGGCCGCAAGACCTACTTGCCCGCCCGTCA
TCCCAGGTCGCTGACTCCACGAGGTCGTCGAGGATTGGAAATACGTTCCT
CAACAATGTCACCTACCTAAGGGGGCACCATGTATTTTCAAACGAAGGCC
AGAGGTGGATTGAATCTCAGGTTGGGGAAAGCGTCAACTTTGATAAGTTG
TTCTCTCTGGAGCTCCGTTGGCTGAAGCCACTTCGATCGTATACGGTCCC
TGGGGCGAACCCCCCTGCCGGTCCGCAGCTTCCAAGTAGAGTTAGCGTGG
AAAGATATGTGCAGATATACGGCTCATCATCCCAAAGTCTTGTCTTCCCG
GTCATCAGCCAGCCCGTCTTTGGCAAAACACTGGACCTTGCCTACAGTCA
TCTCCAGCTTCCTGGTTCTAACAGCGCTAAATCATGCGTCTATGCCTTCC
TCTCACTTATTTCCCTGTTTGGCATGGATGACAACATCCACGGTGCTATG
GACTGCCAGTCTTATGCATCAGTGGCACAGAGCTTTCAGATCCCGGTGAT
TGAGGAGATGACAGTCGACGGGTTGCAGACATTGATCATGCTGGTATGTA
CAAGGCCTTCCCCATGATCCATGTTTTAAATAGCCAACAAAGCCACCAGG
TACAAGTTCAATACTTTCTGGGAGATCTTCAGTCAGCAGCGGCGACATTG
TCTATTGCCACGCGTCTTCTGTACACACTGGAAGCCCATACCACCCCCAC
CAATAAGCCCTCTACCCCGTATGATAAAGGTGATTTGAGATGTCACCTAC
GTGATCTCTTCTGGCTCTGCTACTCCTTTGACAAAGACATATGTCTGAGA
ACGGGCCAGCCACCTTGTATAAACGATGCACATTGTGACCTTACCATGCC
TCCTGATTATGTGCGACTGCATGATCTCAATCTCCAACAGAGTTTGCCAC
AGGTCGACGAGCATCTGGTTCCACTTTTCCCATGGGATCTCCGTCTCTCA
ATGCTCAAATCAAAAGTGTACGAGGATCTTTGA
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Coding sequence (CDS) from alignment at ch7:414071..415553+

>KJC3_009446-T1 ID=KJC3_009446-T1|Name=KJC3_009446-T1|organism=Aspergillus niger KJC3|type=CDS|length=4848bp|location=Sequence derived from alignment at ch7:414071..415553+ (Aspergillus niger KJC3)
ATGCCGGGCAACCGCCCAAGTAAACGGCGTTCGCCACTAACACAGAAACG
ACGGCCGAAACCTAGACGAAGAGCATGCGACTCCTGTTCCAAGAAAAAGA
TCCAATGCGATGGAGAGTTCCCGCAGTGCAACTGGTGCAAGCATCATAAT
CTCGCCTGTACCTTCAATCGAATTCGGGCGAATTCCGACACAGGCAACCG
AGTGATTGTCGCCACACCCGACACACCTAAGGCGGTGATCCCCAACATTG
CGGATGGGCCGCAAGACCTACTTGCCCGCCCGTCATCCCAGGTCGCTGAC
TCCACGAGGTCGTCGAGGATTGGAAATACGTTCCTCAACAATGTCACCTA
CCTAAGGGGGCACCATGTATTTTCAAACGAAGGCCAGAGGTGGATTGAAT
CTCAGGTTGGGGAAAGCGTCAACTTTGATAAGTTGTTCTCTCTGGAGCTC
CGTTGGCTGAAGCCACTTCGATCGTATACGGTCCCTGGGGCGAACCCCCC
TGCCGGTCCGCAGCTTCCAAGTAGAGTTAGCGTGGAAAGATATGTGCAGA
TATACGGCTCATCATCCCAAAGTCTTGTCTTCCCGGTCATCAGCCAGCCC
GTCTTTGGCAAAACACTGGACCTTGCCTACAGTCATCTCCAGCTTCCTGG
TTCTAACAGCGCTAAATCATGCGTCTATGCCTTCCTCTCACTTATTTCCC
TGTTTGGCATGGATGACAACATCCACGGTGCTATGGACTGCCAGTCTTAT
GCATCAGTGGCACAGAGCTTTCAGATCCCGGTGATTGAGGAGATGACAGT
CGACGGGTTGCAGACATTGATCATGCTGGTACAAGTTCAATACTTTCTGG
GAGATCTTCAGTCAGCAGCGGCGACATTGTCTATTGCCACGCGTCTTCTG
TACACACTGGAAGCCCATACCACCCCCACCAATAAGCCCTCTACCCCGTA
TGATAAAGGTGATTTGAGATGTCACCTACGTGATCTCTTCTGGCTCTGCT
ACTCCTTTGACAAAGACATATGTCTGAGAACGGGCCAGCCACCTTGTATA
AACGATGCACATTGTGACCTTACCATGCCTCCTGATTATGTGCGACTGCA
TGATCTCAATCTCCAACAGAGTTTGCCACAGGTCGACGAGCATCTGGTTC
CACTTTTCCCATGGGATCTCCGTCTCTCAATGCTCAAATCAAAAGTGTAC
GAGGATCTTTGAATGCCGGGCAACCGCCCAAGTAAACGGCGTTCGCCACT
AACACAGAAACGACGGCCGAAACCTAGACGAAGAGCATGCGACTCCTGTT
CCAAGAAAAAGATCCAATGCGATGGAGAGTTCCCGCAGTGCAACTGGTGC
AAGCATCATAATCTCGCCTGTACCTTCAATCGAATTCGGGCGAATTCCGA
CACAGGCAACCGAGTGATTGTCGCCACACCCGACACACCTAAGGCGGTGA
TCCCCAACATTGCGGATGGGCCGCAAGACCTACTTGCCCGCCCGTCATCC
CAGGTCGCTGACTCCACGAGGTCGTCGAGGATTGGAAATACGTTCCTCAA
CAATGTCACCTACCTAAGGGGGCACCATGTATTTTCAAACGAAGGCCAGA
GGTGGATTGAATCTCAGGTTGGGGAAAGCGTCAACTTTGATAAGTTGTTC
TCTCTGGAGCTCCGTTGGCTGAAGCCACTTCGATCGTATACGGTCCCTGG
GGCGAACCCCCCTGCCGGTCCGCAGCTTCCAAGTAGAGTTAGCGTGGAAA
GATATGTGCAGATATACGGCTCATCATCCCAAAGTCTTGTCTTCCCGGTC
ATCAGCCAGCCCGTCTTTGGCAAAACACTGGACCTTGCCTACAGTCATCT
CCAGCTTCCTGGTTCTAACAGCGCTAAATCATGCGTCTATGCCTTCCTCT
CACTTATTTCCCTGTTTGGCATGGATGACAACATCCACGGTGCTATGGAC
TGCCAGTCTTATGCATCAGTGGCACAGAGCTTTCAGATCCCGGTGATTGA
GGAGATGACAGTCGACGGGTTGCAGACATTGATCATGCTGGTACAAGTTC
AATACTTTCTGGGAGATCTTCAGTCAGCAGCGGCGACATTGTCTATTGCC
ACGCGTCTTCTGTACACACTGGAAGCCCATACCACCCCCACCAATAAGCC
CTCTACCCCGTATGATAAAGGTGATTTGAGATGTCACCTACGTGATCTCT
TCTGGCTCTGCTACTCCTTTGACAAAGACATATGTCTGAGAACGGGCCAG
CCACCTTGTATAAACGATGCACATTGTGACCTTACCATGCCTCCTGATTA
TGTGCGACTGCATGATCTCAATCTCCAACAGAGTTTGCCACAGGTCGACG
AGCATCTGGTTCCACTTTTCCCATGGGATCTCCGTCTCTCAATGCTCAAA
TCAAAAGTGTACGAGGATCTTTGAATGCCGGGCAACCGCCCAAGTAAACG
GCGTTCGCCACTAACACAGAAACGACGGCCGAAACCTAGACGAAGAGCAT
GCGACTCCTGTTCCAAGAAAAAGATCCAATGCGATGGAGAGTTCCCGCAG
TGCAACTGGTGCAAGCATCATAATCTCGCCTGTACCTTCAATCGAATTCG
GGCGAATTCCGACACAGGCAACCGAGTGATTGTCGCCACACCCGACACAC
CTAAGGCGGTGATCCCCAACATTGCGGATGGGCCGCAAGACCTACTTGCC
CGCCCGTCATCCCAGGTCGCTGACTCCACGAGGTCGTCGAGGATTGGAAA
TACGTTCCTCAACAATGTCACCTACCTAAGGGGGCACCATGTATTTTCAA
ACGAAGGCCAGAGGTGGATTGAATCTCAGGTTGGGGAAAGCGTCAACTTT
GATAAGTTGTTCTCTCTGGAGCTCCGTTGGCTGAAGCCACTTCGATCGTA
TACGGTCCCTGGGGCGAACCCCCCTGCCGGTCCGCAGCTTCCAAGTAGAG
TTAGCGTGGAAAGATATGTGCAGATATACGGCTCATCATCCCAAAGTCTT
GTCTTCCCGGTCATCAGCCAGCCCGTCTTTGGCAAAACACTGGACCTTGC
CTACAGTCATCTCCAGCTTCCTGGTTCTAACAGCGCTAAATCATGCGTCT
ATGCCTTCCTCTCACTTATTTCCCTGTTTGGCATGGATGACAACATCCAC
GGTGCTATGGACTGCCAGTCTTATGCATCAGTGGCACAGAGCTTTCAGAT
CCCGGTGATTGAGGAGATGACAGTCGACGGGTTGCAGACATTGATCATGC
TGGTACAAGTTCAATACTTTCTGGGAGATCTTCAGTCAGCAGCGGCGACA
TTGTCTATTGCCACGCGTCTTCTGTACACACTGGAAGCCCATACCACCCC
CACCAATAAGCCCTCTACCCCGTATGATAAAGGTGATTTGAGATGTCACC
TACGTGATCTCTTCTGGCTCTGCTACTCCTTTGACAAAGACATATGTCTG
AGAACGGGCCAGCCACCTTGTATAAACGATGCACATTGTGACCTTACCAT
GCCTCCTGATTATGTGCGACTGCATGATCTCAATCTCCAACAGAGTTTGC
CACAGGTCGACGAGCATCTGGTTCCACTTTTCCCATGGGATCTCCGTCTC
TCAATGCTCAAATCAAAAGTGTACGAGGATCTTTGAATGCCGGGCAACCG
CCCAAGTAAACGGCGTTCGCCACTAACACAGAAACGACGGCCGAAACCTA
GACGAAGAGCATGCGACTCCTGTTCCAAGAAAAAGATCCAATGCGATGGA
GAGTTCCCGCAGTGCAACTGGTGCAAGCATCATAATCTCGCCTGTACCTT
CAATCGAATTCGGGCGAATTCCGACACAGGCAACCGAGTGATTGTCGCCA
CACCCGACACACCTAAGGCGGTGATCCCCAACATTGCGGATGGGCCGCAA
GACCTACTTGCCCGCCCGTCATCCCAGGTCGCTGACTCCACGAGGTCGTC
GAGGATTGGAAATACGTTCCTCAACAATGTCACCTACCTAAGGGGGCACC
ATGTATTTTCAAACGAAGGCCAGAGGTGGATTGAATCTCAGGTTGGGGAA
AGCGTCAACTTTGATAAGTTGTTCTCTCTGGAGCTCCGTTGGCTGAAGCC
ACTTCGATCGTATACGGTCCCTGGGGCGAACCCCCCTGCCGGTCCGCAGC
TTCCAAGTAGAGTTAGCGTGGAAAGATATGTGCAGATATACGGCTCATCA
TCCCAAAGTCTTGTCTTCCCGGTCATCAGCCAGCCCGTCTTTGGCAAAAC
ACTGGACCTTGCCTACAGTCATCTCCAGCTTCCTGGTTCTAACAGCGCTA
AATCATGCGTCTATGCCTTCCTCTCACTTATTTCCCTGTTTGGCATGGAT
GACAACATCCACGGTGCTATGGACTGCCAGTCTTATGCATCAGTGGCACA
GAGCTTTCAGATCCCGGTGATTGAGGAGATGACAGTCGACGGGTTGCAGA
CATTGATCATGCTGGTACAAGTTCAATACTTTCTGGGAGATCTTCAGTCA
GCAGCGGCGACATTGTCTATTGCCACGCGTCTTCTGTACACACTGGAAGC
CCATACCACCCCCACCAATAAGCCCTCTACCCCGTATGATAAAGGTGATT
TGAGATGTCACCTACGTGATCTCTTCTGGCTCTGCTACTCCTTTGACAAA
GACATATGTCTGAGAACGGGCCAGCCACCTTGTATAAACGATGCACATTG
TGACCTTACCATGCCTCCTGATTATGTGCGACTGCATGATCTCAATCTCC
AACAGAGTTTGCCACAGGTCGACGAGCATCTGGTTCCACTTTTCCCATGG
GATCTCCGTCTCTCAATGCTCAAATCAAAAGTGTACGAGGATCTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009446KJC3_009446Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009446-T1.exon1KJC3_009446-T1.exon1Aspergillus niger KJC3exon
KJC3_009446-T1.exon2KJC3_009446-T1.exon2Aspergillus niger KJC3exon
KJC3_009446-T1.exon3KJC3_009446-T1.exon3Aspergillus niger KJC3exon
KJC3_009446-T1.exon4KJC3_009446-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009446-T1.cdsKJC3_009446-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009446-T1KJC3_009446-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:414071..415553 +
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