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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:442327..445744+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009459-T2 ID=KJC3_009459-T2|Name=KJC3_009459-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3418bp|location=Sequence derived from alignment at ch7:442327..445744+ (Aspergillus niger KJC3)
GCCCGACCTGCACTCTGCTTACTTTTCTACTCTGAGGCTGATACATTGCG
AATACTTGCTTAATTCGCTTACTTCAAAACAGCGGCGGGTCCGAATCTAA
TTAATGTCGTCCACCTCTCCGACTGGGCCTCAGGGTCAGAATCGACCTAA
ACTCGCCTGTTCTCTCTGCGCTCGGCGTAAGGTGAAATGCGATAAGGGCG
AGCCGTGCTCTAACTGCCTCAAGGCGCATGCTCAGTGCTTATACGAGGCC
CCTGCTCCACCTCGACCACGGAAGAGGGCTGCTGATGAAGAGCTTCTCGC
ACGACTAGCTCGGTACGAGGAGCTCATGCGGAAGCACAATATCGATTTCT
CCTCATATGCCCACTGCTGGATCCCTTCGAACCAGAAGACTCAACCGAAG
GTGAGCCATCTGGCTGGCTTACGCACCGAAGTGGGCGGCGAAACTAGTGT
TCATTCTCAAGAAAGGCTCACTGAGAGCACGGATGCTGAAAGAGAACAGT
AAGGTTCCCGCGCGACTAAGAGACTTTCTGCAATATGTTACTAATGATTG
ACAGATGTTTGTGGTCAAATCTAAGGCCAGAGGTTGGTGTTTTCCGCTAC
TACCGTGATCATACGATACTAATGTCCCACTGCGAATAGCTCATGTACCC
CCCTATTCAGAGCCTCAGACACAAGGATGACCCCCTTCTCTATCCTACTC
CTTCCTTTGAAGAGGCTATCTCTGATACACAAAGTATCCATGACGTCCAT
CCCGAGCCAAAGCACATCTATCGGTTGTGGCAGATCTTTGTGGAAAGGGT
CCACCCAATGACAAAGATCGTTCATGTCCCTACCCTGCAGCAGCGTATCT
TAGATACTAGCTGCAATCCCTACTGCGCATCCAAGCAACTGACGGCTATA
ATTTTTGCCATCTATACCATTTCAACCACCTCTATCTCCGCGGGAGACTG
TGAAACTTATTTTGGCCTGGGAAAGGCCCTTCTTTTGAGACAATACCGAA
CCGCAACTCTGCGTGCTCTTATTGCAGCAGACTTCCTCACAACTAGTGAC
CTCGAAGTTTTACAAGCACTGGTATTGTTTCTCTTCTCTAACCCAGGATG
TGATTTAGCAACCACCCTGTCCGGCGCCGCGCTCCGACTAGCCGAGAAGA
TGGGTTTGCATCAAGACACATCTGACCCCAACATATCTTTCTTTGAAAAG
GAGATGCGCATTCGTCTATGGTGGCAGCTCTGCGGTCTCAGCGCTCGGTG
TCGCATTAGCTCTACCCCAGGAATGAAGAAGCCACCACCCACTTCCGAGA
TAGGCGACGTCCGCCTCCCACTCAACGTGAACGACGTGGATCTGCATCCG
GACATGACTGAGCCTCCTCTGGAACACAACGGTCCCACAGAGATGATGTG
TGTCCTGTTGAAAATGGAAGCCTCCAACTGGCGCCGACATTTTCCGACAG
CCACCAAGCTCTTTGAAAGTGTGATGCAGGGCTCGATCAGGTCCAAGGAG
GTAATCGAACTGGAGTGCAAGGCGGTTGACGAGCTCAACGACATATACTG
TCGGAAATACTTTCATAATTCTGATCCACACATCCCACTTCATAGCCTTA
CTCATGCTATTGCGAAACTCTCAATCGCGCGCTTCAGGTTCAAAATTCGT
CATCCTCAAGGGCGGCTCACCGCAGCTGACAACAATGCCTTTTTTACACG
TGAGGAAAGTGATATCCTATTCGAATCATGTCTGACCTGGGTGCAATCCA
TGATGGATATCAGGTTACGCAGCAAGTTCCCGTATTATTTATTCACGCAC
CTCACGACAGACTCTTACATGGATGTTTATATCTACCTCCTGAGTGAGCT
GCGGCGACGATGCTCAGGGGACCGCGTAGCACTTGCTTGGCAACTGGTCG
AAGAACTTTTCAATGAACATCCTGAGCTTATTGATGGTGACGACGATTTC
TATGCTGCATTTGGGGACTTGGTCTTGGATGCATGGGAACATCACAGTCA
CGAGCTGAAAAAAGGCCCGGGAGGTCTAGGATTCGTCACCAAGCCACGAT
TTATTGAACGACTCTATCAGGAAAAGTCTACAAGCGGTCGACCTCGTTAT
AGTAATCTGCCTTCTTTCTCGGATTCACGTGAACTTGGTGGGCTTGAACT
GCAAGATGAAAATGATAGCAATTGGCTGTATTGGGAGGAGTTTCTTCGGT
TATAGGCAGGAATGTGCGGTGCGGTAAGAAATATTGATCAATAAATTTGA
AACTAATGAATAGTCTAACGTCAACAATCTCATACATCGGAAGGTGTAGG
TTCATAGTTCTTTCAGTGCGTCTAATGTACATCTTGGTAACATACGGAAG
ATGACCCGAAGGAAAACTATGATAGAATGCATTTTCTATTCGACCCCCAC
TTCTAGCAGGCTACCAAGACCATTCTGAGGTAAACACAAAATAGTGGCCG
AACTAGCTTCGGTGAAATCAAAATAAATACTCAATCAACACACAACCAAA
CAGCCCCTTCAGTGAAAGGAGCTCTGCCAATAAAAGCAAACAGAAAACAC
AGATTTATCGCCAACAAAACATCGAGCTTGACCCTTCGTGGGACCCCCGA
GCCTCTCTATCCTCATACAAGACTTTCCAGTCTATGTAATGCTAACAATA
GGCAAAGACTGACGATGGACCGATTGCGGAGTAGTCAAGTTGCCAAACTC
TACCGCGAGATCTCTCTTGATGTCCGAAACTTGGACGGCACAATGTGACT
CGGCAACACGAATGGGGCATCCAACTCACTCTTCCCCAGGATGCTCGTAA
TCAAGAGCAGACTCTAAGCTGTCCAAACATCTATTATAAACGCGGGGGAA
TTACTCCACTATCTTTGCACGCTTGGCAGCATTCGTCGGCTGCTGTCCAC
ATTCCACCCATTTCCGCCTGCGCCTAGCTTCCTGTGCCGCAGAAATACTA
GGACGTTTGCCAAAACAATTATCATTTGCGACCTTCTCGCAATACTTAAC
GTGGCTTTCAATAAAGTTCCCGACCTGTCCAGGGCGAGGAGTGAGTATGT
TGATAGATTCATGTGGGCTATTTGAAACCAGAAGAACGCGACGAGCATGG
CTAGCTTTCCAGTTCACCTGCTTGCCAAGGTGTAGAAGGACATGGTAGAC
AATCCCCTTCTGCGTATACTCCTGACAACATCCATAGAACCTATCGGAAG
CGAGAGAATTTTGCTTTAACATTGCTCGAAGCCCTTCCACAAAATCAACT
TCATGCTCCAACGGACACTCCGTGTAGGTAAGAAAGATCCATCGGCGATG
TATCTTCTTGTTCCAAGGCGCCAATGTTTTAGGAGAGGGCCCGACCGTCA
CAACAGAGGACGGCTGAGAAACCTCAGCGGATAATTCCACATGGAAGCGA
TGGAAAGTCATTGTTATG back to topCoding sequence (CDS) from alignment at ch7:442327..445744+ >KJC3_009459-T2 ID=KJC3_009459-T2|Name=KJC3_009459-T2|organism=Aspergillus niger KJC3|type=CDS|length=6684bp|location=Sequence derived from alignment at ch7:442327..445744+ (Aspergillus niger KJC3)
ATGCCCACTGCTGGATCCCTTCGAACCAGAAGACTCAACCGAAGGCTCAC
TGAGAGCACGGATGCTGAAAGAGAACAATGTTTGTGGTCAAATCTAAGGC
CAGAGCTCATGTACCCCCCTATTCAGAGCCTCAGACACAAGGATGACCCC
CTTCTCTATCCTACTCCTTCCTTTGAAGAGGCTATCTCTGATACACAAAG
TATCCATGACGTCCATCCCGAGCCAAAGCACATCTATCGGTTGTGGCAGA
TCTTTGTGGAAAGGGTCCACCCAATGACAAAGATCGTTCATGTCCCTACC
CTGCAGCAGCGTATCTTAGATACTAGCTGCAATCCCTACTGCGCATCCAA
GCAACTGACGGCTATAATTTTTGCCATCTATACCATTTCAACCACCTCTA
TCTCCGCGGGAGACTGTGAAACTTATTTTGGCCTGGGAAAGGCCCTTCTT
TTGAGACAATACCGAACCGCAACTCTGCGTGCTCTTATTGCAGCAGACTT
CCTCACAACTAGTGACCTCGAAGTTTTACAAGCACTGGTATTGTTTCTCT
TCTCTAACCCAGGATGTGATTTAGCAACCACCCTGTCCGGCGCCGCGCTC
CGACTAGCCGAGAAGATGGGTTTGCATCAAGACACATCTGACCCCAACAT
ATCTTTCTTTGAAAAGGAGATGCGCATTCGTCTATGGTGGCAGCTCTGCG
GTCTCAGCGCTCGGTGTCGCATTAGCTCTACCCCAGGAATGAAGAAGCCA
CCACCCACTTCCGAGATAGGCGACGTCCGCCTCCCACTCAACGTGAACGA
CGTGGATCTGCATCCGGACATGACTGAGCCTCCTCTGGAACACAACGGTC
CCACAGAGATGATGTGTGTCCTGTTGAAAATGGAAGCCTCCAACTGGCGC
CGACATTTTCCGACAGCCACCAAGCTCTTTGAAAGTGTGATGCAGGGCTC
GATCAGGTCCAAGGAGGTAATCGAACTGGAGTGCAAGGCGGTTGACGAGC
TCAACGACATATACTGTCGGAAATACTTTCATAATTCTGATCCACACATC
CCACTTCATAGCCTTACTCATGCTATTGCGAAACTCTCAATCGCGCGCTT
CAGGTTCAAAATTCGTCATCCTCAAGGGCGGCTCACCGCAGCTGACAACA
ATGCCTTTTTTACACGTGAGGAAAGTGATATCCTATTCGAATCATGTCTG
ACCTGGGTGCAATCCATGATGGATATCAGGTTACGCAGCAAGTTCCCGTA
TTATTTATTCACGCACCTCACGACAGACTCTTACATGGATGTTTATATCT
ACCTCCTGAGTGAGCTGCGGCGACGATGCTCAGGGGACCGCGTAGCACTT
GCTTGGCAACTGGTCGAAGAACTTTTCAATGAACATCCTGAGCTTATTGA
TGGTGACGACGATTTCTATGCTGCATTTGGGGACTTGGTCTTGGATGCAT
GGGAACATCACAGTCACGAGCTGAAAAAAGGCCCGGGAGGTCTAGGATTC
GTCACCAAGCCACGATTTATTGAACGACTCTATCAGGAAAAGTCTACAAG
CGGTCGACCTCGTTATAGTAATCTGCCTTCTTTCTCGGATTCACGTGAAC
TTGGTGGGCTTGAACTGCAAGATGAAAATGATAGCAATTGGCTGTATTGG
GAGGAGTTTCTTCGGTTATAGATGCCCACTGCTGGATCCCTTCGAACCAG
AAGACTCAACCGAAGGCTCACTGAGAGCACGGATGCTGAAAGAGAACAAT
GTTTGTGGTCAAATCTAAGGCCAGAGCTCATGTACCCCCCTATTCAGAGC
CTCAGACACAAGGATGACCCCCTTCTCTATCCTACTCCTTCCTTTGAAGA
GGCTATCTCTGATACACAAAGTATCCATGACGTCCATCCCGAGCCAAAGC
ACATCTATCGGTTGTGGCAGATCTTTGTGGAAAGGGTCCACCCAATGACA
AAGATCGTTCATGTCCCTACCCTGCAGCAGCGTATCTTAGATACTAGCTG
CAATCCCTACTGCGCATCCAAGCAACTGACGGCTATAATTTTTGCCATCT
ATACCATTTCAACCACCTCTATCTCCGCGGGAGACTGTGAAACTTATTTT
GGCCTGGGAAAGGCCCTTCTTTTGAGACAATACCGAACCGCAACTCTGCG
TGCTCTTATTGCAGCAGACTTCCTCACAACTAGTGACCTCGAAGTTTTAC
AAGCACTGGTATTGTTTCTCTTCTCTAACCCAGGATGTGATTTAGCAACC
ACCCTGTCCGGCGCCGCGCTCCGACTAGCCGAGAAGATGGGTTTGCATCA
AGACACATCTGACCCCAACATATCTTTCTTTGAAAAGGAGATGCGCATTC
GTCTATGGTGGCAGCTCTGCGGTCTCAGCGCTCGGTGTCGCATTAGCTCT
ACCCCAGGAATGAAGAAGCCACCACCCACTTCCGAGATAGGCGACGTCCG
CCTCCCACTCAACGTGAACGACGTGGATCTGCATCCGGACATGACTGAGC
CTCCTCTGGAACACAACGGTCCCACAGAGATGATGTGTGTCCTGTTGAAA
ATGGAAGCCTCCAACTGGCGCCGACATTTTCCGACAGCCACCAAGCTCTT
TGAAAGTGTGATGCAGGGCTCGATCAGGTCCAAGGAGGTAATCGAACTGG
AGTGCAAGGCGGTTGACGAGCTCAACGACATATACTGTCGGAAATACTTT
CATAATTCTGATCCACACATCCCACTTCATAGCCTTACTCATGCTATTGC
GAAACTCTCAATCGCGCGCTTCAGGTTCAAAATTCGTCATCCTCAAGGGC
GGCTCACCGCAGCTGACAACAATGCCTTTTTTACACGTGAGGAAAGTGAT
ATCCTATTCGAATCATGTCTGACCTGGGTGCAATCCATGATGGATATCAG
GTTACGCAGCAAGTTCCCGTATTATTTATTCACGCACCTCACGACAGACT
CTTACATGGATGTTTATATCTACCTCCTGAGTGAGCTGCGGCGACGATGC
TCAGGGGACCGCGTAGCACTTGCTTGGCAACTGGTCGAAGAACTTTTCAA
TGAACATCCTGAGCTTATTGATGGTGACGACGATTTCTATGCTGCATTTG
GGGACTTGGTCTTGGATGCATGGGAACATCACAGTCACGAGCTGAAAAAA
GGCCCGGGAGGTCTAGGATTCGTCACCAAGCCACGATTTATTGAACGACT
CTATCAGGAAAAGTCTACAAGCGGTCGACCTCGTTATAGTAATCTGCCTT
CTTTCTCGGATTCACGTGAACTTGGTGGGCTTGAACTGCAAGATGAAAAT
GATAGCAATTGGCTGTATTGGGAGGAGTTTCTTCGGTTATAGATGCCCAC
TGCTGGATCCCTTCGAACCAGAAGACTCAACCGAAGGCTCACTGAGAGCA
CGGATGCTGAAAGAGAACAATGTTTGTGGTCAAATCTAAGGCCAGAGCTC
ATGTACCCCCCTATTCAGAGCCTCAGACACAAGGATGACCCCCTTCTCTA
TCCTACTCCTTCCTTTGAAGAGGCTATCTCTGATACACAAAGTATCCATG
ACGTCCATCCCGAGCCAAAGCACATCTATCGGTTGTGGCAGATCTTTGTG
GAAAGGGTCCACCCAATGACAAAGATCGTTCATGTCCCTACCCTGCAGCA
GCGTATCTTAGATACTAGCTGCAATCCCTACTGCGCATCCAAGCAACTGA
CGGCTATAATTTTTGCCATCTATACCATTTCAACCACCTCTATCTCCGCG
GGAGACTGTGAAACTTATTTTGGCCTGGGAAAGGCCCTTCTTTTGAGACA
ATACCGAACCGCAACTCTGCGTGCTCTTATTGCAGCAGACTTCCTCACAA
CTAGTGACCTCGAAGTTTTACAAGCACTGGTATTGTTTCTCTTCTCTAAC
CCAGGATGTGATTTAGCAACCACCCTGTCCGGCGCCGCGCTCCGACTAGC
CGAGAAGATGGGTTTGCATCAAGACACATCTGACCCCAACATATCTTTCT
TTGAAAAGGAGATGCGCATTCGTCTATGGTGGCAGCTCTGCGGTCTCAGC
GCTCGGTGTCGCATTAGCTCTACCCCAGGAATGAAGAAGCCACCACCCAC
TTCCGAGATAGGCGACGTCCGCCTCCCACTCAACGTGAACGACGTGGATC
TGCATCCGGACATGACTGAGCCTCCTCTGGAACACAACGGTCCCACAGAG
ATGATGTGTGTCCTGTTGAAAATGGAAGCCTCCAACTGGCGCCGACATTT
TCCGACAGCCACCAAGCTCTTTGAAAGTGTGATGCAGGGCTCGATCAGGT
CCAAGGAGGTAATCGAACTGGAGTGCAAGGCGGTTGACGAGCTCAACGAC
ATATACTGTCGGAAATACTTTCATAATTCTGATCCACACATCCCACTTCA
TAGCCTTACTCATGCTATTGCGAAACTCTCAATCGCGCGCTTCAGGTTCA
AAATTCGTCATCCTCAAGGGCGGCTCACCGCAGCTGACAACAATGCCTTT
TTTACACGTGAGGAAAGTGATATCCTATTCGAATCATGTCTGACCTGGGT
GCAATCCATGATGGATATCAGGTTACGCAGCAAGTTCCCGTATTATTTAT
TCACGCACCTCACGACAGACTCTTACATGGATGTTTATATCTACCTCCTG
AGTGAGCTGCGGCGACGATGCTCAGGGGACCGCGTAGCACTTGCTTGGCA
ACTGGTCGAAGAACTTTTCAATGAACATCCTGAGCTTATTGATGGTGACG
ACGATTTCTATGCTGCATTTGGGGACTTGGTCTTGGATGCATGGGAACAT
CACAGTCACGAGCTGAAAAAAGGCCCGGGAGGTCTAGGATTCGTCACCAA
GCCACGATTTATTGAACGACTCTATCAGGAAAAGTCTACAAGCGGTCGAC
CTCGTTATAGTAATCTGCCTTCTTTCTCGGATTCACGTGAACTTGGTGGG
CTTGAACTGCAAGATGAAAATGATAGCAATTGGCTGTATTGGGAGGAGTT
TCTTCGGTTATAGATGCCCACTGCTGGATCCCTTCGAACCAGAAGACTCA
ACCGAAGGCTCACTGAGAGCACGGATGCTGAAAGAGAACAATGTTTGTGG
TCAAATCTAAGGCCAGAGCTCATGTACCCCCCTATTCAGAGCCTCAGACA
CAAGGATGACCCCCTTCTCTATCCTACTCCTTCCTTTGAAGAGGCTATCT
CTGATACACAAAGTATCCATGACGTCCATCCCGAGCCAAAGCACATCTAT
CGGTTGTGGCAGATCTTTGTGGAAAGGGTCCACCCAATGACAAAGATCGT
TCATGTCCCTACCCTGCAGCAGCGTATCTTAGATACTAGCTGCAATCCCT
ACTGCGCATCCAAGCAACTGACGGCTATAATTTTTGCCATCTATACCATT
TCAACCACCTCTATCTCCGCGGGAGACTGTGAAACTTATTTTGGCCTGGG
AAAGGCCCTTCTTTTGAGACAATACCGAACCGCAACTCTGCGTGCTCTTA
TTGCAGCAGACTTCCTCACAACTAGTGACCTCGAAGTTTTACAAGCACTG
GTATTGTTTCTCTTCTCTAACCCAGGATGTGATTTAGCAACCACCCTGTC
CGGCGCCGCGCTCCGACTAGCCGAGAAGATGGGTTTGCATCAAGACACAT
CTGACCCCAACATATCTTTCTTTGAAAAGGAGATGCGCATTCGTCTATGG
TGGCAGCTCTGCGGTCTCAGCGCTCGGTGTCGCATTAGCTCTACCCCAGG
AATGAAGAAGCCACCACCCACTTCCGAGATAGGCGACGTCCGCCTCCCAC
TCAACGTGAACGACGTGGATCTGCATCCGGACATGACTGAGCCTCCTCTG
GAACACAACGGTCCCACAGAGATGATGTGTGTCCTGTTGAAAATGGAAGC
CTCCAACTGGCGCCGACATTTTCCGACAGCCACCAAGCTCTTTGAAAGTG
TGATGCAGGGCTCGATCAGGTCCAAGGAGGTAATCGAACTGGAGTGCAAG
GCGGTTGACGAGCTCAACGACATATACTGTCGGAAATACTTTCATAATTC
TGATCCACACATCCCACTTCATAGCCTTACTCATGCTATTGCGAAACTCT
CAATCGCGCGCTTCAGGTTCAAAATTCGTCATCCTCAAGGGCGGCTCACC
GCAGCTGACAACAATGCCTTTTTTACACGTGAGGAAAGTGATATCCTATT
CGAATCATGTCTGACCTGGGTGCAATCCATGATGGATATCAGGTTACGCA
GCAAGTTCCCGTATTATTTATTCACGCACCTCACGACAGACTCTTACATG
GATGTTTATATCTACCTCCTGAGTGAGCTGCGGCGACGATGCTCAGGGGA
CCGCGTAGCACTTGCTTGGCAACTGGTCGAAGAACTTTTCAATGAACATC
CTGAGCTTATTGATGGTGACGACGATTTCTATGCTGCATTTGGGGACTTG
GTCTTGGATGCATGGGAACATCACAGTCACGAGCTGAAAAAAGGCCCGGG
AGGTCTAGGATTCGTCACCAAGCCACGATTTATTGAACGACTCTATCAGG
AAAAGTCTACAAGCGGTCGACCTCGTTATAGTAATCTGCCTTCTTTCTCG
GATTCACGTGAACTTGGTGGGCTTGAACTGCAAGATGAAAATGATAGCAA
TTGGCTGTATTGGGAGGAGTTTCTTCGGTTATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009459-T2.utr5p1 | KJC3_009459-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009459-T2.utr3p1 | KJC3_009459-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:442327..445744 + |
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