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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:486016..488030+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009475-T1 ID=KJC3_009475-T1|Name=KJC3_009475-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2015bp|location=Sequence derived from alignment at ch7:486016..488030+ (Aspergillus niger KJC3)
GTCTCAGCATAGGGATACAGTTACGTTGACCTCTTTGTGTGGTTTCTTAT
ACTCTAGGATTGCATTACACCATCACAACTCAACCAGACTGTACGTTACC
CATGAAGGCCGATAGTGCGGGGTTCATCCACACCCCACTGGGTACTGATG
AACACTACATCCGACTTCTCAAATTTGACTCTACCGCCCCAGAGAAACCT
CTCAAATTTTCTCTCATAACATGCAAATTCGCAGAGAAACCTGCTCACAA
CAGCCTCTCCTATGAATGGGGAACTGTCGCAGCCGACCAACTGATCCTCG
TCAACGATCGGCCCTTCTTCATCCGGGAGAACCTGCACAGCTTCCTGAAA
GTGTTAGCCACCAGTGCTTACAGAGAAAATTATTTCTTCGCGGACGCAAT
TTGTATCAATCAGGTGGACATTTCCGAGCGTAACGCCCAGGTACAGCGAA
TGGGCGATCTTTATGCACAGGCAGAGAATGTGCTCGTCTGGCTTGGGCAC
TCTACAGCCGAGAGTGATTTTGTCTTCGATGTATGCATTGATTCAGTAGC
GAACAGCACCATCGCCACGACCAAGCTGGGGGAGCAAAAGGCTAGAATCG
AGGCCCTTGATTTCAACGCGCCCGACGGACAGGCCCTGGATACAGTATAC
CAACGGTCATACTGGACAAGACTGTGGATCATCCAGGAGATATTCCTCGC
GCGAAACATTATCCTATTTTGTGGATCAAAGTCGACAACATGGTCAGTCT
TTAGGCGGCTCCCGAGGTGGAACAAGGGCGAGTTTGTCCTGGGAGGCTTC
ACGGGAGTTGATATGGTCCTTGGGAGCACACCGGCCGGACGGCATGCAAG
AGAAATTCTCAATGAGTTGGACAAGAGGCAACAGGGAAGAAGCACCTATG
AAGACAAAGGGATCGTCGACTTGACTCTGAAATTTGGTCTGGCTCAGTGT
TTCGATGTTCGCGATCGTGTCTATGGTCTGCTTGGTCTCGCTAGCGCATC
CGGTAAACACGAGGAAGATGGAGGCCTTGAGGTCGTCGCGGACTATTCGG
AGAGCCCAATGTGTCTATTCGTGCGCCTTTTGCGTACCATGCCACGTGAG
CTCCGTATTGAAACCGCACTAAAGCTCTTCAACATTCTGAAGCTGCACCA
TGCTCACGAAAGTGCAATTGTTGGAAACATTCCAGACAGGGACAGCAACT
TCAACATTCCTTTCGACGTCTATTTTACCCATATAGGACATCTCAGACAT
GTGACTCAAACCTCTCGACCTTCCTGCAGACCTTGCCGCAACTGGGCAAG
GCGATCTGTTCCATTTGTGATGAACGAGTCCCTGCACCAACAGCTGGCGG
GAAAGACTTGCTCGCAGATAAAAACCGGTGAAAGTCAAAGTGCTATGGCC
AGACATGGTGGTGGGCCTCTATATAAAATGATGTCTTATAACAGCTGCGT
AACTGAGTCCGGCGCTTGTGAAGGAGATGAGGTTTTCCTTCTGGAAGGTA
CAAATGTCGTCCTAATCCGACATCAAGATGATTCAGGTTCTACGCTACGT
TACATGCGGGGTGTTCTCTGCAGCATAGAAAGGGAGCAAAGTATCCAGAG
AGCCGGGGAATTGCTCGATAGCTGCCTCTCGTACTTACCATCTATCGATG
GGGTCTGTCTCAGGACTGAGAGGCATACGATATGGACTCTAGTGGGCCCA
GTTGAGTTTGTCTATGAGGAGCTGAGTCTGCGACAGATTTTATTGCTTCT
CATATATACTGGACAACACAGTGATTATTGGAATCGGCGGTTAGAGGCTA
CTTCTAGCGACTAACGACCAGAAGGATGGGCGAACGTCTGTTACATAACC
ATATAGTCTGAACGCGCAGTCTTTTAGCAGGCCCTGTTCAGCATCATTCT
CTAATGTATTCTTATTTGAAAGACGAAGCTCAGATGCCATGTCGATATGT
ATGTTACTTGCCTTGGGGAAATTTCACTGTATGACGTATGTTGGTTAGGT
CTGCATTAGTCCAGG back to topCoding sequence (CDS) from alignment at ch7:486016..488030+ >KJC3_009475-T1 ID=KJC3_009475-T1|Name=KJC3_009475-T1|organism=Aspergillus niger KJC3|type=CDS|length=1713bp|location=Sequence derived from alignment at ch7:486016..488030+ (Aspergillus niger KJC3)
ATGAAGGCCGATAGTGCGGGGTTCATCCACACCCCACTGGGTACTGATGA
ACACTACATCCGACTTCTCAAATTTGACTCTACCGCCCCAGAGAAACCTC
TCAAATTTTCTCTCATAACATGCAAATTCGCAGAGAAACCTGCTCACAAC
AGCCTCTCCTATGAATGGGGAACTGTCGCAGCCGACCAACTGATCCTCGT
CAACGATCGGCCCTTCTTCATCCGGGAGAACCTGCACAGCTTCCTGAAAG
TGTTAGCCACCAGTGCTTACAGAGAAAATTATTTCTTCGCGGACGCAATT
TGTATCAATCAGGTGGACATTTCCGAGCGTAACGCCCAGGTACAGCGAAT
GGGCGATCTTTATGCACAGGCAGAGAATGTGCTCGTCTGGCTTGGGCACT
CTACAGCCGAGAGTGATTTTGTCTTCGATGTATGCATTGATTCAGTAGCG
AACAGCACCATCGCCACGACCAAGCTGGGGGAGCAAAAGGCTAGAATCGA
GGCCCTTGATTTCAACGCGCCCGACGGACAGGCCCTGGATACAGTATACC
AACGGTCATACTGGACAAGACTGTGGATCATCCAGGAGATATTCCTCGCG
CGAAACATTATCCTATTTTGTGGATCAAAGTCGACAACATGGTCAGTCTT
TAGGCGGCTCCCGAGGTGGAACAAGGGCGAGTTTGTCCTGGGAGGCTTCA
CGGGAGTTGATATGGTCCTTGGGAGCACACCGGCCGGACGGCATGCAAGA
GAAATTCTCAATGAGTTGGACAAGAGGCAACAGGGAAGAAGCACCTATGA
AGACAAAGGGATCGTCGACTTGACTCTGAAATTTGGTCTGGCTCAGTGTT
TCGATGTTCGCGATCGTGTCTATGGTCTGCTTGGTCTCGCTAGCGCATCC
GGTAAACACGAGGAAGATGGAGGCCTTGAGGTCGTCGCGGACTATTCGGA
GAGCCCAATGTGTCTATTCGTGCGCCTTTTGCGTACCATGCCACGTGAGC
TCCGTATTGAAACCGCACTAAAGCTCTTCAACATTCTGAAGCTGCACCAT
GCTCACGAAAGTGCAATTGTTGGAAACATTCCAGACAGGGACAGCAACTT
CAACATTCCTTTCGACGTCTATTTTACCCATATAGGACATCTCAGACATG
TGACTCAAACCTCTCGACCTTCCTGCAGACCTTGCCGCAACTGGGCAAGG
CGATCTGTTCCATTTGTGATGAACGAGTCCCTGCACCAACAGCTGGCGGG
AAAGACTTGCTCGCAGATAAAAACCGGTGAAAGTCAAAGTGCTATGGCCA
GACATGGTGGTGGGCCTCTATATAAAATGATGTCTTATAACAGCTGCGTA
ACTGAGTCCGGCGCTTGTGAAGGAGATGAGGTTTTCCTTCTGGAAGGTAC
AAATGTCGTCCTAATCCGACATCAAGATGATTCAGGTTCTACGCTACGTT
ACATGCGGGGTGTTCTCTGCAGCATAGAAAGGGAGCAAAGTATCCAGAGA
GCCGGGGAATTGCTCGATAGCTGCCTCTCGTACTTACCATCTATCGATGG
GGTCTGTCTCAGGACTGAGAGGCATACGATATGGACTCTAGTGGGCCCAG
TTGAGTTTGTCTATGAGGAGCTGAGTCTGCGACAGATTTTATTGCTTCTC
ATATATACTGGACAACACAGTGATTATTGGAATCGGCGGTTAGAGGCTAC
TTCTAGCGACTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009475-T1.utr5p1 | KJC3_009475-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009475-T1.utr3p1 | KJC3_009475-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.3 |
| DBxref | InterPro:IPR010730 |
| DBxref | PFAM:PF06985 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:486016..488030 + |
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