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KJC3_009486-T1, KJC3_009486-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009486-T1
Unique NameKJC3_009486-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:524451..525781-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009486-T1 ID=KJC3_009486-T1|Name=KJC3_009486-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1331bp|location=Sequence derived from alignment at ch7:524451..525781- (Aspergillus niger KJC3)
ACTCTTTAATCAAACCGTCTCTCTCTCTGTTGAAATGATTTCCATCTTGT
AACCGTTTATACAGAGTTGTAAAATTCACGACAGGCATGGGTACTCCTAT
CACCGTGGGCGTGATAGGTGCAACGGGTAAAACAGGCCGGTCTGTGGTAG
ATGGCCTACTTTCCTCACCGACAAAATTCGTATGACATCCGAGTCGCATA
CTCGATATTTATGATCTTAACTGATGAGTCTAGCAGACTGTCACATCATT
TACCCGTGAGGCGTCAGTCAACAGCCAAGCCAACGAAACCCTCCAAGCAA
AAGGTGTCCAGATTGTCGGCTACGACCTGAACGGTCCCCGGGAGGTCCTA
GTACATCAACTAAAGAAAATCGATGTCCTAATCTCATGCATTACCTGGGA
ACATCTTGAATCTCAGAATCCATGGATCGAAGCCGCCAAAGAAGCAGGGG
TAAAGCGGTTCGTGCCATCGGAATGGGTTGGACCGGCACCCAGAGGCATC
ATCGACATCAAAGACAAGAAGCTTGACATCCTGGGCGTTATTCAACGCGT
GGGCCTTCCATACACTCTCATCGACGTCGGATGTTGGTTCCAGGTTTGGG
TACCCAAGATTTCCTCCGGTCGGTCGGACCACGCCCATTCGATTTACATT
GACCATCGGATCGTTGGCGATGGCAATCAGAAGTTTGGGTTGACGGATAT
GGGGGATATTGGGAAGTATGTCGCGCAGATTATATCAGATGCGCGGACGT
TAAATCGGCGTGTGTTTGCGTATACCGAGGTTCTGAGTATGAACGAGATT
TGGGATACGATGGCAACGGTCAGCGGGGAGATACCTCCGAGAGACTATGT
AAGTGGAAAAATTCGGTCTGGGATCGCATTAACCCATGGCTCCTATGAGT
GACGCGTTGACTTGATCCAACAGGTGTCAGAGGAAGACCTCAGGGAGATT
ATTGAATCGTGTGGGAAGAGGTGGCATGAGCATGGCGCTAAAGTCGATAT
CATGGACGTTGCCAATTACAACATGGGCCAATACCGCATATCATGGTGTA
TTCGAGGTGATAATACCCCGGAGTTTGCAGACTATCTCGGGTACCTCGAC
TTCTGGAAGCTGTTCCCAGACTTCCCAAAGGTCAGGTCGTTGAAGGCATT
CTACCAGCAGGTCGTCACGGGGCCCTGCGCGGGGTATGGACCAGCAACAT
CTGAATGAGTTGTCTGAGTATTATGATGATCTGAATCAATCGGCAAATCC
TTACCCTGACGTGTCTTACCATACACGTAGCAGATGGAATATTGTAGTCA
TTATACATACTTTTCACACGTAGTAGGAAAT
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Coding sequence (CDS) from alignment at ch7:524451..525781-

>KJC3_009486-T1 ID=KJC3_009486-T1|Name=KJC3_009486-T1|organism=Aspergillus niger KJC3|type=CDS|length=1518bp|location=Sequence derived from alignment at ch7:524451..525781- (Aspergillus niger KJC3)
ACTGTCACATCATTTACCCGTGAGGCGTCAGTCAACAGCCAAGCCAACGA
AACCCTCCAAGCAAAAGGTGTCCAGATTGTCGGCTACGACCTGAACGGTC
CCCGGGAGGTCCTAGTACATCAACTAAAGAAAATCGATGTCCTAATCTCA
TGCATTACCTGGGAACATCTTGAATCTCAGAATCCATGGATCGAAGCCGC
CAAAGAAGCAGGGGTAAAGCGGTTCGTGCCATCGGAATGGGTTGGACCGG
CACCCAGAGGCATCATCGACATCAAAGACAAGAAGCTTGACATCCTGGGC
GTTATTCAACGCGTGGGCCTTCCATACACTCTCATCGACGTCGGATGTTG
GTTCCAGGTTTGGGTACCCAAGATTTCCTCCGGTCGGTCGGACCACGCCC
ATTCGATTTACATTGACCATCGGATCGTTGGCGATGGCAATCAGAAGTTT
GGGTTGACGGATATGGGGGATATTGGGAAGTATGTCGCGCAGATTATATC
AGATGCGCGGACGTTAAATCGGCGTGTGTTTGCGTATACCGAGGTTCTGA
GTATGAACGAGATTTGGGATACGATGGCAACGGTCAGCGGGGAGATACCT
CCGAGAGACTATGTAAGTGGAAAAATTCGGTCTGGGATCGCATTAACCCA
TGGCTCCTATGAGTGAATGGGTACTCCTATCACCGTGGGCGTGATAGGTG
CAACGGGTAAAACAGGCCGGTCTGTGGTAGATGGCCTACTTTCCTCACCG
ACAAAATTCACTGTCACATCATTTACCCGTGAGGCGTCAGTCAACAGCCA
AGCCAACGAAACCCTCCAAGCAAAAGGTGTCCAGATTGTCGGCTACGACC
TGAACGGTCCCCGGGAGGTCCTAGTACATCAACTAAAGAAAATCGATGTC
CTAATCTCATGCATTACCTGGGAACATCTTGAATCTCAGAATCCATGGAT
CGAAGCCGCCAAAGAAGCAGGGGTAAAGCGGTTCGTGCCATCGGAATGGG
TTGGACCGGCACCCAGAGGCATCATCGACATCAAAGACAAGAAGCTTGAC
ATCCTGGGCGTTATTCAACGCGTGGGCCTTCCATACACTCTCATCGACGT
CGGATGTTGGTTCCAGGTTTGGGTACCCAAGATTTCCTCCGGTCGGTCGG
ACCACGCCCATTCGATTTACATTGACCATCGGATCGTTGGCGATGGCAAT
CAGAAGTTTGGGTTGACGGATATGGGGGATATTGGGAAGTATGTCGCGCA
GATTATATCAGATGCGCGGACGTTAAATCGGCGTGTGTTTGCGTATACCG
AGGTTCTGAGTATGAACGAGATTTGGGATACGATGGCAACGGTCAGCGGG
GAGATACCTCCGAGAGACTATGTAAGTGGAAAAATTCGGTCTGGGATCGC
ATTAACCCATGGCTCCTATGAGTGAATGGGTACTCCTATCACCGTGGGCG
TGATAGGTGCAACGGGTAAAACAGGCCGGTCTGTGGTAGATGGCCTACTT
TCCTCACCGACAAAATTC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009486KJC3_009486Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009486-T1KJC3_009486-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009486-T1.cdsKJC3_009486-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009486-T1.utr3p1KJC3_009486-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009486-T1.exon2KJC3_009486-T1.exon2Aspergillus niger KJC3exon
KJC3_009486-T1.exon1KJC3_009486-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009486-T1.utr5p1KJC3_009486-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_7.4
NoteantiSMASH:Cluster_7.3
NoteSMCOG1199:NmrA family protein
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:524451..525781 -
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