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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:555228..556056- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009495-T1 ID=KJC3_009495-T1|Name=KJC3_009495-T1|organism=Aspergillus niger KJC3|type=mRNA|length=829bp|location=Sequence derived from alignment at ch7:555228..556056- (Aspergillus niger KJC3)
ATGTCCCTGTTTTCCTTGTCCGGCAAGACTGCTCTAATCACCGGCGGCAC
CCGGGGCATCGGCCAAGCCATTGCTCTCGGGCTAGCTGAGCACGGCGCAG
ACCTTATCCTAGTCCAGCGCTCGACAAACGTCTCGGACACTCAACCAGCC
GTCGAACGGCTCGGTAGGCGTTGTGAGGTGGTCCAATGTGACCTTGCCGA
CAGGGAACAAGTTGAAGGACTGATTAGCCGAGTCGTCGCCACTCATTCTA
TCGACATCCTCGTCAACTGCGCTGCAATCCAACACCGCAGTCCAGCAGAG
GATTATGCTACACACCACTATGAAGCGATAATGCAAACCAACCTGACAGC
TCCATTTATTCTCTGTCGCGATATTGCCCGTCACTGGATTTCGCAGGGGC
AGCGCGGTAAAATTATCAACGTGGCCAGCGTGGCCAGCTTTCAGGGCGGT
ATTAACGTTTCCGGGTACGTGGGAAGCAAGGGGGGATTGCTGCAATTGAC
CCGTGCGTTCAGTAATGAATGGGCGGGAAGGGGGATTAATGTCAATGCCA
TTGCCCCAGGGTATGTGATAAAATATGCGTTCTTGACCAGATCTCCTTTC
AGGAACACTGACTCGGCTTTTAAGGTACATCGAAACTGATATGACTGCTG
ATACCCTGACGGAGCCACGATATGCGGCCTACCGTGACTCTATTATACCG
CGGATCCCTGTGGGCAGGTGGGGAAAGCCGGAGGATATGAAAGGGGTAGC
GGTGTTTCTGGCTAGCCAGGCTAGTAATTATGTCAGCGGGGAGGCGATCG
TGGTTGATGGGGGTTGGTTGGCACGTTGA back to topCoding sequence (CDS) from alignment at ch7:555228..556056- >KJC3_009495-T1 ID=KJC3_009495-T1|Name=KJC3_009495-T1|organism=Aspergillus niger KJC3|type=CDS|length=1530bp|location=Sequence derived from alignment at ch7:555228..556056- (Aspergillus niger KJC3)
GTACATCGAAACTGATATGACTGCTGATACCCTGACGGAGCCACGATATG
CGGCCTACCGTGACTCTATTATACCGCGGATCCCTGTGGGCAGGTGGGGA
AAGCCGGAGGATATGAAAGGGGTAGCGGTGTTTCTGGCTAGCCAGGCTAG
TAATTATGTCAGCGGGGAGGCGATCGTGGTTGATGGGGGTTGGTTGGCAC
GTTGAATGTCCCTGTTTTCCTTGTCCGGCAAGACTGCTCTAATCACCGGC
GGCACCCGGGGCATCGGCCAAGCCATTGCTCTCGGGCTAGCTGAGCACGG
CGCAGACCTTATCCTAGTCCAGCGCTCGACAAACGTCTCGGACACTCAAC
CAGCCGTCGAACGGCTCGGTAGGCGTTGTGAGGTGGTCCAATGTGACCTT
GCCGACAGGGAACAAGTTGAAGGACTGATTAGCCGAGTCGTCGCCACTCA
TTCTATCGACATCCTCGTCAACTGCGCTGCAATCCAACACCGCAGTCCAG
CAGAGGATTATGCTACACACCACTATGAAGCGATAATGCAAACCAACCTG
ACAGCTCCATTTATTCTCTGTCGCGATATTGCCCGTCACTGGATTTCGCA
GGGGCAGCGCGGTAAAATTATCAACGTGGCCAGCGTGGCCAGCTTTCAGG
GCGGTATTAACGTTTCCGGGTACGTGGGAAGCAAGGGGGGATTGCTGCAA
TTGACCCGTGCGTTCAGTAATGAATGGGCGGGAAGGGGGATTAATGTCAA
TGCCATTGCCCCAGGGTACATCGAAACTGATATGACTGCTGATACCCTGA
CGGAGCCACGATATGCGGCCTACCGTGACTCTATTATACCGCGGATCCCT
GTGGGCAGGTGGGGAAAGCCGGAGGATATGAAAGGGGTAGCGGTGTTTCT
GGCTAGCCAGGCTAGTAATTATGTCAGCGGGGAGGCGATCGTGGTTGATG
GGGGTTGGTTGGCACGTTGAATGTCCCTGTTTTCCTTGTCCGGCAAGACT
GCTCTAATCACCGGCGGCACCCGGGGCATCGGCCAAGCCATTGCTCTCGG
GCTAGCTGAGCACGGCGCAGACCTTATCCTAGTCCAGCGCTCGACAAACG
TCTCGGACACTCAACCAGCCGTCGAACGGCTCGGTAGGCGTTGTGAGGTG
GTCCAATGTGACCTTGCCGACAGGGAACAAGTTGAAGGACTGATTAGCCG
AGTCGTCGCCACTCATTCTATCGACATCCTCGTCAACTGCGCTGCAATCC
AACACCGCAGTCCAGCAGAGGATTATGCTACACACCACTATGAAGCGATA
ATGCAAACCAACCTGACAGCTCCATTTATTCTCTGTCGCGATATTGCCCG
TCACTGGATTTCGCAGGGGCAGCGCGGTAAAATTATCAACGTGGCCAGCG
TGGCCAGCTTTCAGGGCGGTATTAACGTTTCCGGGTACGTGGGAAGCAAG
GGGGGATTGCTGCAATTGACCCGTGCGTTCAGTAATGAATGGGCGGGAAG
GGGGATTAATGTCAATGCCATTGCCCCAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.4 |
| Note | antiSMASH:Cluster_7.3 |
| Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:555228..556056 - |
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