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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:571830..572835+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009499-T1 ID=KJC3_009499-T1|Name=KJC3_009499-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1006bp|location=Sequence derived from alignment at ch7:571830..572835+ (Aspergillus niger KJC3)
TGCCGATCGCGTTGACCCCCTCAGCGAGCGAGCTCCGCCGATATCGGCCC
GTCGCTAGCCATTTACAGCAGCTATAAAGGAAGCAACGAATACATGTCAA
CCCATTTCTCATCGACGATCGTTTTTTCATACTTCAGAGAAAGAGCAAAA
TGCCTGAGACAGCAACTTATACCCACGGCCATCATGCCTCCGTGCTCCGA
TCTCACGGACAACGGACCGCCCTCAACTCCGCTCAATACCTCCTACCACA
CCTCCAACCCCAGATGAAGATCCTAGACATTGGCTGTGGTCCAGGCACTA
TAACCGTGGATTTGGCCACTTATGTCCCCAACGGTCATGTTACAGGACTG
GAAATGGTCGACGACGTCCTATCAGGCGCCCGACAGCTCGCCGAATCGCG
AGGCATCCACAACATCGAGTTCGTAACGGGTGACGCCAACAACCTGGCCT
ACGCCGAAGGATCATTCGATGTGGTCGTCTGCCACCAGGTATTACAGCAC
GTCGGAGATCCTGTGAACGTGCTGAAAGAAATGCGGCGTGTCTGCAAGAC
TGGCGGCATTGTCGCAGCGCGCGAGTCCGATTACTCGGTCTTCATGTGGT
ACCCGGAACTGCCTGGACTGCGACGCTGGCAGGAGCTGTACGATCGGGTA
GCTCGGAAGAATGGAGGAGAGCCTAATGCGGGCCGGTACTTGCATGCTTG
GGCACGTCAGGCTGGATTTGAGAAGCAGAAGGTCGATTGTACTGTGAGCG
CGTGGTGCTTTACGAAGCCAGAAGAGGTTCAGTGGTGGAGTGGCACATGG
CAAGAACGCGCGTTGAAATCGGCCTTTGCTAAGGGGGCTCTAGATAATGA
ATTAGCGACGGTGGAGGAGCTCGAGGGTATATCTACTGTTTGGCGGCAGT
GGGGTGAGGATGCGGATGCCTGGATCTCGATTCCCAGTGCGGAGATCATC
TGTCGTAAATAGCGATATCATGTCTTATCACTTATCAGCCGACGGATAGA
GTCGGG back to topCoding sequence (CDS) from alignment at ch7:571830..572835+ >KJC3_009499-T1 ID=KJC3_009499-T1|Name=KJC3_009499-T1|organism=Aspergillus niger KJC3|type=CDS|length=813bp|location=Sequence derived from alignment at ch7:571830..572835+ (Aspergillus niger KJC3)
ATGCCTGAGACAGCAACTTATACCCACGGCCATCATGCCTCCGTGCTCCG
ATCTCACGGACAACGGACCGCCCTCAACTCCGCTCAATACCTCCTACCAC
ACCTCCAACCCCAGATGAAGATCCTAGACATTGGCTGTGGTCCAGGCACT
ATAACCGTGGATTTGGCCACTTATGTCCCCAACGGTCATGTTACAGGACT
GGAAATGGTCGACGACGTCCTATCAGGCGCCCGACAGCTCGCCGAATCGC
GAGGCATCCACAACATCGAGTTCGTAACGGGTGACGCCAACAACCTGGCC
TACGCCGAAGGATCATTCGATGTGGTCGTCTGCCACCAGGTATTACAGCA
CGTCGGAGATCCTGTGAACGTGCTGAAAGAAATGCGGCGTGTCTGCAAGA
CTGGCGGCATTGTCGCAGCGCGCGAGTCCGATTACTCGGTCTTCATGTGG
TACCCGGAACTGCCTGGACTGCGACGCTGGCAGGAGCTGTACGATCGGGT
AGCTCGGAAGAATGGAGGAGAGCCTAATGCGGGCCGGTACTTGCATGCTT
GGGCACGTCAGGCTGGATTTGAGAAGCAGAAGGTCGATTGTACTGTGAGC
GCGTGGTGCTTTACGAAGCCAGAAGAGGTTCAGTGGTGGAGTGGCACATG
GCAAGAACGCGCGTTGAAATCGGCCTTTGCTAAGGGGGCTCTAGATAATG
AATTAGCGACGGTGGAGGAGCTCGAGGGTATATCTACTGTTTGGCGGCAG
TGGGGTGAGGATGCGGATGCCTGGATCTCGATTCCCAGTGCGGAGATCAT
CTGTCGTAAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009499-T1.utr5p1 | KJC3_009499-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009499-T1.utr3p1 | KJC3_009499-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.4 |
| Note | SMCOG1089:methyltransferase |
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR025714 |
| DBxref | PFAM:PF07021 |
| DBxref | PFAM:PF13847 |
| DBxref | PFAM:PF13649 |
| DBxref | PFAM:PF13489 |
| DBxref | PFAM:PF08242 |
| DBxref | PFAM:PF08241 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:571830..572835 + |
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