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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:576480..578420+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009502-T1 ID=KJC3_009502-T1|Name=KJC3_009502-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1941bp|location=Sequence derived from alignment at ch7:576480..578420+ (Aspergillus niger KJC3) CCTTGAACATGAATAAATAACGTGTTTGCATCATGAATGTCGCCCTTGTG
CAGCAGTTCATCTGTGATGTAAGCTTGCCTACTACCGTTGCGTGAACAAC
ATCCATCTTACCCACGGTCGGTTATTGGTCCAGCCGATACTATCGGAATG
GTCCGCCACGGGAGGTTGTCGAGAGGCTGCCAGGTCTGTAGGAAGAGAAA
AATCAAGGTACAGTTAGACTCACTTTGTTGAAAGCTTTTACAATTCAATC
CTTGTATATTTCGCATCGACGCTTATTTTATGAACTACAATAGTGCGACC
GGGCGCGACCGCATTGCAACCAATGCCTCAAGTCCGGGTGGAAGTGTCCA
CAGTATGGTGATTCTATAGAACGGATGTTTGTCCATCATATCCCAGAGAA
TTGTGACACAAATAATGTGTTGAAAGCGACTAGCTCCTCACCGGGATCCT
GTATAACAAGAAGGGCACGCATTGACCTCCAAGTAAATCTCAGCCCACCA
ACTGCCGACATACTAGGCGGAAGGATAGTCCAATCTGCGGAATCCCGTGC
GATCGATTTCTTCATGTCAGCTCATACCTTCCAGAACATTGGTCTCATCC
GGGGGCATTACGAGTATTTATCTGCATTCCCGATCGATGTCATGGCCGAG
GAAAGAGTTGTAGCGAGCCTCCGCGCCGTTGCACTGGCAGCTTATGCTAC
CAAATTCCAACATTTTGTCCTTCTCAAAAAAGCTAGACAGTATTACGTTT
CAGCACTTCGACATATCAACGTGGCCTTGTTATCTCGCCGTGAAGCAGCA
AAATATGCCACCATCATCTCGATTCTATTTCTGAACACCTTTGAGGCCCT
GACTTGTGAAAGCAGAGACTTCCCCTATCAAAGAGAGACTCACTTGAGGG
GGGTAGCATCCATATTGGAATTCCGAGGAGTGGAGCTTGTCCAATCTCGT
CGCGGACTCCAATTATTTCGACAAACTCTTCTTTGCATCTCGGTGACCTG
CCTAATGCGCTCTTTTCGAATACCCATGGGACTGGTCAAGCTTCACCGCC
ACGCTGCTGCTTATATGGACACTGGTGATCCTGCGTGGAAATTGTCGGAT
ATCATGATAGCATTGGCATATTTCCGAGCACTGGTCAAAGACCGTACGCT
CTGCGATCCGGAGACTATAATCGCATCTGCTAAGTATATAGATCGCAACC
TCTGCTCGCTCGCAGACAATATGCCCAAAGACTGGCAATTTCAAGTCGTG
GAATTAGAGACGACGTCTGAAGTTGTCATGGGAACGCAGTATCACGTGTA
TCCCGATGCATGGGTCGCAGGTGTGTGGAACAACATCCGTACATGTCGCT
TGCTTTTGCATCAAGAGATCAAGCGGCAGTTGGAGAATGTCCTGGACACG
CATCTATTCGAAGCCGTCCAGTATCAGCAGTCCGTCATAATAATGCAACA
GCTGGTTTCGGACATTTGTGCTTCTGTGCCTCAATACTGCGGCTATATAC
CGGATGTAGTTGATGGTTCCCCAGACACGCCGCAAGCCACTTCGGTAGCA
GATGGGTTGACATCTGCTTACCAGTCCAGCAATGGTATCCCCGCTACCGC
TGGTATCTACCTCCTTTTCTGGCCTCTTCTATCTGCCGGGCAGATGGCCA
ATTCGGAAAAGCAGCGAGGTTGGATAATTGATCGCATGCGATATATTGGT
GAAACTACCGGTATTCAGCAAGCCTTTGTATTTGAGGATATACTGAAACG
GGCTGTGGACCCTTTTCAATAAACGAATCTTATGAAGCTGGGTAATAAAT
AATTCTGGAGAGGCTATTTGAAGACATGGGAGGAGTGGGTTGTGCTTTTG
CTGGGTGGAATGGATATGAAATGTACTAATTTCAAAACAGTCCGCATAGG
ATAGAATTCCTTTTAGAGCGACCGAACGAAAAACAAAAAAG back to topCoding sequence (CDS) from alignment at ch7:576480..578420+ >KJC3_009502-T1 ID=KJC3_009502-T1|Name=KJC3_009502-T1|organism=Aspergillus niger KJC3|type=CDS|length=4473bp|location=Sequence derived from alignment at ch7:576480..578420+ (Aspergillus niger KJC3) ATGGTCCGCCACGGGAGGTTGTCGAGAGGCTGCCAGGTCTGTAGGAAGAG AAAAATCAAGTGCGACCGGGCGCGACCGCATTGCAACCAATGCCTCAAGT CCGGGTGGAAGTGTCCACAGTATGGTGATTCTATAGAACGGATGTTTGTC CATCATATCCCAGAGAATTGTGACACAAATAATGTGTTGAAAGCGACTAG CTCCTCACCGGGATCCTGTATAACAAGAAGGGCACGCATTGACCTCCAAG TAAATCTCAGCCCACCAACTGCCGACATACTAGGCGGAAGGATAGTCCAA TCTGCGGAATCCCGTGCGATCGATTTCTTCATGTCAGCTCATACCTTCCA GAACATTGGTCTCATCCGGGGGCATTACGAGTATTTATCTGCATTCCCGA TCGATGTCATGGCCGAGGAAAGAGTTGTAGCGAGCCTCCGCGCCGTTGCA CTGGCAGCTTATGCTACCAAATTCCAACATTTTGTCCTTCTCAAAAAAGC TAGACAGTATTACGTTTCAGCACTTCGACATATCAACGTGGCCTTGTTAT CTCGCCGTGAAGCAGCAAAATATGCCACCATCATCTCGATTCTATTTCTG AACACCTTTGAGGCCCTGACTTGTGAAAGCAGAGACTTCCCCTATCAAAG AGAGACTCACTTGAGGGGGGTAGCATCCATATTGGAATTCCGAGGAGTGG AGCTTGTCCAATCTCGTCGCGGACTCCAATTATTTCGACAAACTCTTCTT TGCATCTCGGTGACCTGCCTAATGCGCTCTTTTCGAATACCCATGGGACT GGTCAAGCTTCACCGCCACGCTGCTGCTTATATGGACACTGGTGATCCTG CGTGGAAATTGTCGGATATCATGATAGCATTGGCATATTTCCGAGCACTG GTCAAAGACCATCGCAACCTCTGCTCGCTCGCAGACAATATGCCCAAAGA CTGGCAATTTCAAGTCGTGGAATTAGAGACGACGTCTGAAGTTGTCATGG GAACGCAGTATCACGTGTATCCCGATGCATGGGTCGCAGGTGTGTGGAAC AACATCCGTACATGTCGCTTGCTTTTGCATCAAGAGATCAAGCGGCAGTT GGAGAATGTCCTGGACACGCATCTATTCGAAGCCGTCCAGTATCAGCAGT CCGTCATAATAATGCAACAGCTGGTTTCGGACATTTGTGCTTCTGTGCCT CAATACTGCGGCTATATACCGGATGTAGTTGATGGTTCCCCAGACACGCC GCAAGCCACTTCGGTAGCAGATGGGTTGACATCTGCTTACCAGTCCAGCA ATGGTATCCCCGCTACCGCTGGTATCTACCTCCTTTTCTGGCCTCTTCTA TCTGCCGGGCAGATGGCCAATTCGGAAAAGCAGCGAGGTTGGATAATTGA TCGCATGCGATATATTGGTGAAACTACCGGTATTCAGCAAGCCTTTGTAT TTGAGGATATACTGAAACGGGCTGTGGACCCTTTTCAATAAATGGTCCGC CACGGGAGGTTGTCGAGAGGCTGCCAGGTCTGTAGGAAGAGAAAAATCAA GTGCGACCGGGCGCGACCGCATTGCAACCAATGCCTCAAGTCCGGGTGGA AGTGTCCACAGTATGGTGATTCTATAGAACGGATGTTTGTCCATCATATC CCAGAGAATTGTGACACAAATAATGTGTTGAAAGCGACTAGCTCCTCACC GGGATCCTGTATAACAAGAAGGGCACGCATTGACCTCCAAGTAAATCTCA GCCCACCAACTGCCGACATACTAGGCGGAAGGATAGTCCAATCTGCGGAA TCCCGTGCGATCGATTTCTTCATGTCAGCTCATACCTTCCAGAACATTGG TCTCATCCGGGGGCATTACGAGTATTTATCTGCATTCCCGATCGATGTCA TGGCCGAGGAAAGAGTTGTAGCGAGCCTCCGCGCCGTTGCACTGGCAGCT TATGCTACCAAATTCCAACATTTTGTCCTTCTCAAAAAAGCTAGACAGTA TTACGTTTCAGCACTTCGACATATCAACGTGGCCTTGTTATCTCGCCGTG AAGCAGCAAAATATGCCACCATCATCTCGATTCTATTTCTGAACACCTTT GAGGCCCTGACTTGTGAAAGCAGAGACTTCCCCTATCAAAGAGAGACTCA CTTGAGGGGGGTAGCATCCATATTGGAATTCCGAGGAGTGGAGCTTGTCC AATCTCGTCGCGGACTCCAATTATTTCGACAAACTCTTCTTTGCATCTCG GTGACCTGCCTAATGCGCTCTTTTCGAATACCCATGGGACTGGTCAAGCT TCACCGCCACGCTGCTGCTTATATGGACACTGGTGATCCTGCGTGGAAAT TGTCGGATATCATGATAGCATTGGCATATTTCCGAGCACTGGTCAAAGAC CATCGCAACCTCTGCTCGCTCGCAGACAATATGCCCAAAGACTGGCAATT TCAAGTCGTGGAATTAGAGACGACGTCTGAAGTTGTCATGGGAACGCAGT ATCACGTGTATCCCGATGCATGGGTCGCAGGTGTGTGGAACAACATCCGT ACATGTCGCTTGCTTTTGCATCAAGAGATCAAGCGGCAGTTGGAGAATGT CCTGGACACGCATCTATTCGAAGCCGTCCAGTATCAGCAGTCCGTCATAA TAATGCAACAGCTGGTTTCGGACATTTGTGCTTCTGTGCCTCAATACTGC GGCTATATACCGGATGTAGTTGATGGTTCCCCAGACACGCCGCAAGCCAC TTCGGTAGCAGATGGGTTGACATCTGCTTACCAGTCCAGCAATGGTATCC CCGCTACCGCTGGTATCTACCTCCTTTTCTGGCCTCTTCTATCTGCCGGG CAGATGGCCAATTCGGAAAAGCAGCGAGGTTGGATAATTGATCGCATGCG ATATATTGGTGAAACTACCGGTATTCAGCAAGCCTTTGTATTTGAGGATA TACTGAAACGGGCTGTGGACCCTTTTCAATAAATGGTCCGCCACGGGAGG TTGTCGAGAGGCTGCCAGGTCTGTAGGAAGAGAAAAATCAAGTGCGACCG GGCGCGACCGCATTGCAACCAATGCCTCAAGTCCGGGTGGAAGTGTCCAC AGTATGGTGATTCTATAGAACGGATGTTTGTCCATCATATCCCAGAGAAT TGTGACACAAATAATGTGTTGAAAGCGACTAGCTCCTCACCGGGATCCTG TATAACAAGAAGGGCACGCATTGACCTCCAAGTAAATCTCAGCCCACCAA CTGCCGACATACTAGGCGGAAGGATAGTCCAATCTGCGGAATCCCGTGCG ATCGATTTCTTCATGTCAGCTCATACCTTCCAGAACATTGGTCTCATCCG GGGGCATTACGAGTATTTATCTGCATTCCCGATCGATGTCATGGCCGAGG AAAGAGTTGTAGCGAGCCTCCGCGCCGTTGCACTGGCAGCTTATGCTACC AAATTCCAACATTTTGTCCTTCTCAAAAAAGCTAGACAGTATTACGTTTC AGCACTTCGACATATCAACGTGGCCTTGTTATCTCGCCGTGAAGCAGCAA AATATGCCACCATCATCTCGATTCTATTTCTGAACACCTTTGAGGCCCTG ACTTGTGAAAGCAGAGACTTCCCCTATCAAAGAGAGACTCACTTGAGGGG GGTAGCATCCATATTGGAATTCCGAGGAGTGGAGCTTGTCCAATCTCGTC GCGGACTCCAATTATTTCGACAAACTCTTCTTTGCATCTCGGTGACCTGC CTAATGCGCTCTTTTCGAATACCCATGGGACTGGTCAAGCTTCACCGCCA CGCTGCTGCTTATATGGACACTGGTGATCCTGCGTGGAAATTGTCGGATA TCATGATAGCATTGGCATATTTCCGAGCACTGGTCAAAGACCATCGCAAC CTCTGCTCGCTCGCAGACAATATGCCCAAAGACTGGCAATTTCAAGTCGT GGAATTAGAGACGACGTCTGAAGTTGTCATGGGAACGCAGTATCACGTGT ATCCCGATGCATGGGTCGCAGGTGTGTGGAACAACATCCGTACATGTCGC TTGCTTTTGCATCAAGAGATCAAGCGGCAGTTGGAGAATGTCCTGGACAC GCATCTATTCGAAGCCGTCCAGTATCAGCAGTCCGTCATAATAATGCAAC AGCTGGTTTCGGACATTTGTGCTTCTGTGCCTCAATACTGCGGCTATATA CCGGATGTAGTTGATGGTTCCCCAGACACGCCGCAAGCCACTTCGGTAGC AGATGGGTTGACATCTGCTTACCAGTCCAGCAATGGTATCCCCGCTACCG CTGGTATCTACCTCCTTTTCTGGCCTCTTCTATCTGCCGGGCAGATGGCC AATTCGGAAAAGCAGCGAGGTTGGATAATTGATCGCATGCGATATATTGG TGAAACTACCGGTATTCAGCAAGCCTTTGTATTTGAGGATATACTGAAAC GGGCTGTGGACCCTTTTCAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0008270 | zinc ion binding |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009502-T1.utr3p1 | KJC3_009502-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
Note | antiSMASH:Cluster_7.4 |
DBxref | InterPro:IPR036864 |
DBxref | InterPro:IPR001138 |
DBxref | PFAM:PF00172 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:576480..578420 + |
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