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KJC3_009502-T1, KJC3_009502-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009502-T1
Unique NameKJC3_009502-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:576480..578420+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009502-T1 ID=KJC3_009502-T1|Name=KJC3_009502-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1941bp|location=Sequence derived from alignment at ch7:576480..578420+ (Aspergillus niger KJC3)
CCTTGAACATGAATAAATAACGTGTTTGCATCATGAATGTCGCCCTTGTG
CAGCAGTTCATCTGTGATGTAAGCTTGCCTACTACCGTTGCGTGAACAAC
ATCCATCTTACCCACGGTCGGTTATTGGTCCAGCCGATACTATCGGAATG
GTCCGCCACGGGAGGTTGTCGAGAGGCTGCCAGGTCTGTAGGAAGAGAAA
AATCAAGGTACAGTTAGACTCACTTTGTTGAAAGCTTTTACAATTCAATC
CTTGTATATTTCGCATCGACGCTTATTTTATGAACTACAATAGTGCGACC
GGGCGCGACCGCATTGCAACCAATGCCTCAAGTCCGGGTGGAAGTGTCCA
CAGTATGGTGATTCTATAGAACGGATGTTTGTCCATCATATCCCAGAGAA
TTGTGACACAAATAATGTGTTGAAAGCGACTAGCTCCTCACCGGGATCCT
GTATAACAAGAAGGGCACGCATTGACCTCCAAGTAAATCTCAGCCCACCA
ACTGCCGACATACTAGGCGGAAGGATAGTCCAATCTGCGGAATCCCGTGC
GATCGATTTCTTCATGTCAGCTCATACCTTCCAGAACATTGGTCTCATCC
GGGGGCATTACGAGTATTTATCTGCATTCCCGATCGATGTCATGGCCGAG
GAAAGAGTTGTAGCGAGCCTCCGCGCCGTTGCACTGGCAGCTTATGCTAC
CAAATTCCAACATTTTGTCCTTCTCAAAAAAGCTAGACAGTATTACGTTT
CAGCACTTCGACATATCAACGTGGCCTTGTTATCTCGCCGTGAAGCAGCA
AAATATGCCACCATCATCTCGATTCTATTTCTGAACACCTTTGAGGCCCT
GACTTGTGAAAGCAGAGACTTCCCCTATCAAAGAGAGACTCACTTGAGGG
GGGTAGCATCCATATTGGAATTCCGAGGAGTGGAGCTTGTCCAATCTCGT
CGCGGACTCCAATTATTTCGACAAACTCTTCTTTGCATCTCGGTGACCTG
CCTAATGCGCTCTTTTCGAATACCCATGGGACTGGTCAAGCTTCACCGCC
ACGCTGCTGCTTATATGGACACTGGTGATCCTGCGTGGAAATTGTCGGAT
ATCATGATAGCATTGGCATATTTCCGAGCACTGGTCAAAGACCGTACGCT
CTGCGATCCGGAGACTATAATCGCATCTGCTAAGTATATAGATCGCAACC
TCTGCTCGCTCGCAGACAATATGCCCAAAGACTGGCAATTTCAAGTCGTG
GAATTAGAGACGACGTCTGAAGTTGTCATGGGAACGCAGTATCACGTGTA
TCCCGATGCATGGGTCGCAGGTGTGTGGAACAACATCCGTACATGTCGCT
TGCTTTTGCATCAAGAGATCAAGCGGCAGTTGGAGAATGTCCTGGACACG
CATCTATTCGAAGCCGTCCAGTATCAGCAGTCCGTCATAATAATGCAACA
GCTGGTTTCGGACATTTGTGCTTCTGTGCCTCAATACTGCGGCTATATAC
CGGATGTAGTTGATGGTTCCCCAGACACGCCGCAAGCCACTTCGGTAGCA
GATGGGTTGACATCTGCTTACCAGTCCAGCAATGGTATCCCCGCTACCGC
TGGTATCTACCTCCTTTTCTGGCCTCTTCTATCTGCCGGGCAGATGGCCA
ATTCGGAAAAGCAGCGAGGTTGGATAATTGATCGCATGCGATATATTGGT
GAAACTACCGGTATTCAGCAAGCCTTTGTATTTGAGGATATACTGAAACG
GGCTGTGGACCCTTTTCAATAAACGAATCTTATGAAGCTGGGTAATAAAT
AATTCTGGAGAGGCTATTTGAAGACATGGGAGGAGTGGGTTGTGCTTTTG
CTGGGTGGAATGGATATGAAATGTACTAATTTCAAAACAGTCCGCATAGG
ATAGAATTCCTTTTAGAGCGACCGAACGAAAAACAAAAAAG
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Coding sequence (CDS) from alignment at ch7:576480..578420+

>KJC3_009502-T1 ID=KJC3_009502-T1|Name=KJC3_009502-T1|organism=Aspergillus niger KJC3|type=CDS|length=4473bp|location=Sequence derived from alignment at ch7:576480..578420+ (Aspergillus niger KJC3)
ATGGTCCGCCACGGGAGGTTGTCGAGAGGCTGCCAGGTCTGTAGGAAGAG
AAAAATCAAGTGCGACCGGGCGCGACCGCATTGCAACCAATGCCTCAAGT
CCGGGTGGAAGTGTCCACAGTATGGTGATTCTATAGAACGGATGTTTGTC
CATCATATCCCAGAGAATTGTGACACAAATAATGTGTTGAAAGCGACTAG
CTCCTCACCGGGATCCTGTATAACAAGAAGGGCACGCATTGACCTCCAAG
TAAATCTCAGCCCACCAACTGCCGACATACTAGGCGGAAGGATAGTCCAA
TCTGCGGAATCCCGTGCGATCGATTTCTTCATGTCAGCTCATACCTTCCA
GAACATTGGTCTCATCCGGGGGCATTACGAGTATTTATCTGCATTCCCGA
TCGATGTCATGGCCGAGGAAAGAGTTGTAGCGAGCCTCCGCGCCGTTGCA
CTGGCAGCTTATGCTACCAAATTCCAACATTTTGTCCTTCTCAAAAAAGC
TAGACAGTATTACGTTTCAGCACTTCGACATATCAACGTGGCCTTGTTAT
CTCGCCGTGAAGCAGCAAAATATGCCACCATCATCTCGATTCTATTTCTG
AACACCTTTGAGGCCCTGACTTGTGAAAGCAGAGACTTCCCCTATCAAAG
AGAGACTCACTTGAGGGGGGTAGCATCCATATTGGAATTCCGAGGAGTGG
AGCTTGTCCAATCTCGTCGCGGACTCCAATTATTTCGACAAACTCTTCTT
TGCATCTCGGTGACCTGCCTAATGCGCTCTTTTCGAATACCCATGGGACT
GGTCAAGCTTCACCGCCACGCTGCTGCTTATATGGACACTGGTGATCCTG
CGTGGAAATTGTCGGATATCATGATAGCATTGGCATATTTCCGAGCACTG
GTCAAAGACCATCGCAACCTCTGCTCGCTCGCAGACAATATGCCCAAAGA
CTGGCAATTTCAAGTCGTGGAATTAGAGACGACGTCTGAAGTTGTCATGG
GAACGCAGTATCACGTGTATCCCGATGCATGGGTCGCAGGTGTGTGGAAC
AACATCCGTACATGTCGCTTGCTTTTGCATCAAGAGATCAAGCGGCAGTT
GGAGAATGTCCTGGACACGCATCTATTCGAAGCCGTCCAGTATCAGCAGT
CCGTCATAATAATGCAACAGCTGGTTTCGGACATTTGTGCTTCTGTGCCT
CAATACTGCGGCTATATACCGGATGTAGTTGATGGTTCCCCAGACACGCC
GCAAGCCACTTCGGTAGCAGATGGGTTGACATCTGCTTACCAGTCCAGCA
ATGGTATCCCCGCTACCGCTGGTATCTACCTCCTTTTCTGGCCTCTTCTA
TCTGCCGGGCAGATGGCCAATTCGGAAAAGCAGCGAGGTTGGATAATTGA
TCGCATGCGATATATTGGTGAAACTACCGGTATTCAGCAAGCCTTTGTAT
TTGAGGATATACTGAAACGGGCTGTGGACCCTTTTCAATAAATGGTCCGC
CACGGGAGGTTGTCGAGAGGCTGCCAGGTCTGTAGGAAGAGAAAAATCAA
GTGCGACCGGGCGCGACCGCATTGCAACCAATGCCTCAAGTCCGGGTGGA
AGTGTCCACAGTATGGTGATTCTATAGAACGGATGTTTGTCCATCATATC
CCAGAGAATTGTGACACAAATAATGTGTTGAAAGCGACTAGCTCCTCACC
GGGATCCTGTATAACAAGAAGGGCACGCATTGACCTCCAAGTAAATCTCA
GCCCACCAACTGCCGACATACTAGGCGGAAGGATAGTCCAATCTGCGGAA
TCCCGTGCGATCGATTTCTTCATGTCAGCTCATACCTTCCAGAACATTGG
TCTCATCCGGGGGCATTACGAGTATTTATCTGCATTCCCGATCGATGTCA
TGGCCGAGGAAAGAGTTGTAGCGAGCCTCCGCGCCGTTGCACTGGCAGCT
TATGCTACCAAATTCCAACATTTTGTCCTTCTCAAAAAAGCTAGACAGTA
TTACGTTTCAGCACTTCGACATATCAACGTGGCCTTGTTATCTCGCCGTG
AAGCAGCAAAATATGCCACCATCATCTCGATTCTATTTCTGAACACCTTT
GAGGCCCTGACTTGTGAAAGCAGAGACTTCCCCTATCAAAGAGAGACTCA
CTTGAGGGGGGTAGCATCCATATTGGAATTCCGAGGAGTGGAGCTTGTCC
AATCTCGTCGCGGACTCCAATTATTTCGACAAACTCTTCTTTGCATCTCG
GTGACCTGCCTAATGCGCTCTTTTCGAATACCCATGGGACTGGTCAAGCT
TCACCGCCACGCTGCTGCTTATATGGACACTGGTGATCCTGCGTGGAAAT
TGTCGGATATCATGATAGCATTGGCATATTTCCGAGCACTGGTCAAAGAC
CATCGCAACCTCTGCTCGCTCGCAGACAATATGCCCAAAGACTGGCAATT
TCAAGTCGTGGAATTAGAGACGACGTCTGAAGTTGTCATGGGAACGCAGT
ATCACGTGTATCCCGATGCATGGGTCGCAGGTGTGTGGAACAACATCCGT
ACATGTCGCTTGCTTTTGCATCAAGAGATCAAGCGGCAGTTGGAGAATGT
CCTGGACACGCATCTATTCGAAGCCGTCCAGTATCAGCAGTCCGTCATAA
TAATGCAACAGCTGGTTTCGGACATTTGTGCTTCTGTGCCTCAATACTGC
GGCTATATACCGGATGTAGTTGATGGTTCCCCAGACACGCCGCAAGCCAC
TTCGGTAGCAGATGGGTTGACATCTGCTTACCAGTCCAGCAATGGTATCC
CCGCTACCGCTGGTATCTACCTCCTTTTCTGGCCTCTTCTATCTGCCGGG
CAGATGGCCAATTCGGAAAAGCAGCGAGGTTGGATAATTGATCGCATGCG
ATATATTGGTGAAACTACCGGTATTCAGCAAGCCTTTGTATTTGAGGATA
TACTGAAACGGGCTGTGGACCCTTTTCAATAAATGGTCCGCCACGGGAGG
TTGTCGAGAGGCTGCCAGGTCTGTAGGAAGAGAAAAATCAAGTGCGACCG
GGCGCGACCGCATTGCAACCAATGCCTCAAGTCCGGGTGGAAGTGTCCAC
AGTATGGTGATTCTATAGAACGGATGTTTGTCCATCATATCCCAGAGAAT
TGTGACACAAATAATGTGTTGAAAGCGACTAGCTCCTCACCGGGATCCTG
TATAACAAGAAGGGCACGCATTGACCTCCAAGTAAATCTCAGCCCACCAA
CTGCCGACATACTAGGCGGAAGGATAGTCCAATCTGCGGAATCCCGTGCG
ATCGATTTCTTCATGTCAGCTCATACCTTCCAGAACATTGGTCTCATCCG
GGGGCATTACGAGTATTTATCTGCATTCCCGATCGATGTCATGGCCGAGG
AAAGAGTTGTAGCGAGCCTCCGCGCCGTTGCACTGGCAGCTTATGCTACC
AAATTCCAACATTTTGTCCTTCTCAAAAAAGCTAGACAGTATTACGTTTC
AGCACTTCGACATATCAACGTGGCCTTGTTATCTCGCCGTGAAGCAGCAA
AATATGCCACCATCATCTCGATTCTATTTCTGAACACCTTTGAGGCCCTG
ACTTGTGAAAGCAGAGACTTCCCCTATCAAAGAGAGACTCACTTGAGGGG
GGTAGCATCCATATTGGAATTCCGAGGAGTGGAGCTTGTCCAATCTCGTC
GCGGACTCCAATTATTTCGACAAACTCTTCTTTGCATCTCGGTGACCTGC
CTAATGCGCTCTTTTCGAATACCCATGGGACTGGTCAAGCTTCACCGCCA
CGCTGCTGCTTATATGGACACTGGTGATCCTGCGTGGAAATTGTCGGATA
TCATGATAGCATTGGCATATTTCCGAGCACTGGTCAAAGACCATCGCAAC
CTCTGCTCGCTCGCAGACAATATGCCCAAAGACTGGCAATTTCAAGTCGT
GGAATTAGAGACGACGTCTGAAGTTGTCATGGGAACGCAGTATCACGTGT
ATCCCGATGCATGGGTCGCAGGTGTGTGGAACAACATCCGTACATGTCGC
TTGCTTTTGCATCAAGAGATCAAGCGGCAGTTGGAGAATGTCCTGGACAC
GCATCTATTCGAAGCCGTCCAGTATCAGCAGTCCGTCATAATAATGCAAC
AGCTGGTTTCGGACATTTGTGCTTCTGTGCCTCAATACTGCGGCTATATA
CCGGATGTAGTTGATGGTTCCCCAGACACGCCGCAAGCCACTTCGGTAGC
AGATGGGTTGACATCTGCTTACCAGTCCAGCAATGGTATCCCCGCTACCG
CTGGTATCTACCTCCTTTTCTGGCCTCTTCTATCTGCCGGGCAGATGGCC
AATTCGGAAAAGCAGCGAGGTTGGATAATTGATCGCATGCGATATATTGG
TGAAACTACCGGTATTCAGCAAGCCTTTGTATTTGAGGATATACTGAAAC
GGGCTGTGGACCCTTTTCAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009502KJC3_009502Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009502-T1KJC3_009502-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009502-T1.utr5p1KJC3_009502-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_009502-T1.utr5p2KJC3_009502-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009502-T1.exon1KJC3_009502-T1.exon1Aspergillus niger KJC3exon
KJC3_009502-T1.exon2KJC3_009502-T1.exon2Aspergillus niger KJC3exon
KJC3_009502-T1.exon3KJC3_009502-T1.exon3Aspergillus niger KJC3exon
KJC3_009502-T1.exon4KJC3_009502-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009502-T1.cdsKJC3_009502-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009502-T1.utr3p1KJC3_009502-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_7.4
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:576480..578420 +
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