You are here

Home

KJC3_009502-T2, KJC3_009502-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009502-T2
Unique NameKJC3_009502-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:576480..578420+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009502-T2 ID=KJC3_009502-T2|Name=KJC3_009502-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1941bp|location=Sequence derived from alignment at ch7:576480..578420+ (Aspergillus niger KJC3)
CCTTGAACATGAATAAATAACGTGTTTGCATCATGAATGTCGCCCTTGTG
CAGCAGTTCATCTGTGATGTAAGCTTGCCTACTACCGTTGCGTGAACAAC
ATCCATCTTACCCACGGTCGGTTATTGGTCCAGCCGATACTATCGGAATG
GTCCGCCACGGGAGGTTGTCGAGAGGCTGCCAGGTCTGTAGGAAGAGAAA
AATCAAGGTACAGTTAGACTCACTTTGTTGAAAGCTTTTACAATTCAATC
CTTGTATATTTCGCATCGACGCTTATTTTATGAACTACAATAGTGCGACC
GGGCGCGACCGCATTGCAACCAATGCCTCAAGTCCGGGTGGAAGTGTCCA
CAGTATGGTGATTCTATAGAACGGATGTTTGTCCATCATATCCCAGAGAA
TTGTGACACAAATAATGTGTTGAAAGCGACTAGCTCCTCACCGGGATCCT
GTATAACAAGAAGGGCACGCATTGACCTCCAAGTAAATCTCAGCCCACCA
ACTGCCGACATACTAGGCGGAAGGATAGTCCAATCTGCGGAATCCCGTGC
GATCGATTTCTTCATGTCAGCTCATACCTTCCAGAACATTGGTCTCATCC
GGGGGCATTACGAGTATTTATCTGCATTCCCGATCGATGTCATGGCCGAG
GAAAGAGTTGTAGCGAGCCTCCGCGCCGTTGCACTGGCAGCTTATGCTAC
CAAATTCCAACATTTTGTCCTTCTCAAAAAAGCTAGACAGTATTACGTTT
CAGCACTTCGACATATCAACGTGGCCTTGTTATCTCGCCGTGAAGCAGCA
AAATATGCCACCATCATCTCGATTCTATTTCTGAACACCTTTGAGGCCCT
GACTTGTGAAAGCAGAGACTTCCCCTATCAAAGAGAGACTCACTTGAGGG
GGGTAGCATCCATATTGGAATTCCGAGGAGTGGAGCTTGTCCAATCTCGT
CGCGGACTCCAATTATTTCGACAAACTCTTCTTTGCATCTCGGTGACCTG
CCTAATGCGCTCTTTTCGAATACCCATGGGACTGGTCAAGCTTCACCGCC
ACGCTGCTGCTTATATGGACACTGGTGATCCTGCGTGGAAATTGTCGGAT
ATCATGATAGCATTGGCATATTTCCGAGCACTGGTCAAAGACCGTACGCT
CTGCGATCCGGAGACTATAATCGCATCTGCTAAGTATATAGATCGCAACC
TCTGCTCGCTCGCAGACAATATGCCCAAAGACTGGCAATTTCAAGTCGTG
GAATTAGAGACGACGTCTGAAGTTGTCATGGGAACGCAGTATCACGTGTA
TCCCGATGCATGGGTCGCAGGTGTGTGGAACAACATCCGTACATGTCGCT
TGCTTTTGCATCAAGAGATCAAGCGGCAGTTGGAGAATGTCCTGGACACG
CATCTATTCGAAGCCGTCCAGTATCAGCAGTCCGTCATAATAATGCAACA
GCTGGTTTCGGACATTTGTGCTTCTGTGCCTCAATACTGCGGCTATATAC
CGGATGTAGTTGATGGTTCCCCAGACACGCCGCAAGCCACTTCGGTAGCA
GATGGGTTGACATCTGCTTACCAGTCCAGCAATGGTATCCCCGCTACCGC
TGGTATCTACCTCCTTTTCTGGCCTCTTCTATCTGCCGGGCAGATGGCCA
ATTCGGAAAAGCAGCGAGGTTGGATAATTGATCGCATGCGATATATTGGT
GAAACTACCGGTATTCAGCAAGCCTTTGTATTTGAGGATATACTGAAACG
GGCTGTGGACCCTTTTCAATAAACGAATCTTATGAAGCTGGGTAATAAAT
AATTCTGGAGAGGCTATTTGAAGACATGGGAGGAGTGGGTTGTGCTTTTG
CTGGGTGGAATGGATATGAAATGTACTAATTTCAAAACAGTCCGCATAGG
ATAGAATTCCTTTTAGAGCGACCGAACGAAAAACAAAAAAG
back to top

Coding sequence (CDS) from alignment at ch7:576480..578420+

>KJC3_009502-T2 ID=KJC3_009502-T2|Name=KJC3_009502-T2|organism=Aspergillus niger KJC3|type=CDS|length=2322bp|location=Sequence derived from alignment at ch7:576480..578420+ (Aspergillus niger KJC3)
ATGTCAGCTCATACCTTCCAGAACATTGGTCTCATCCGGGGGCATTACGA
GTATTTATCTGCATTCCCGATCGATGTCATGGCCGAGGAAAGAGTTGTAG
CGAGCCTCCGCGCCGTTGCACTGGCAGCTTATGCTACCAAATTCCAACAT
TTTGTCCTTCTCAAAAAAGCTAGACAGTATTACGTTTCAGCACTTCGACA
TATCAACGTGGCCTTGTTATCTCGCCGTGAAGCAGCAAAATATGCCACCA
TCATCTCGATTCTATTTCTGAACACCTTTGAGGCCCTGACTTGTGAAAGC
AGAGACTTCCCCTATCAAAGAGAGACTCACTTGAGGGGGGTAGCATCCAT
ATTGGAATTCCGAGGAGTGGAGCTTGTCCAATCTCGTCGCGGACTCCAAT
TATTTCGACAAACTCTTCTTTGCATCTCGGTGACCTGCCTAATGCGCTCT
TTTCGAATACCCATGGGACTGGTCAAGCTTCACCGCCACGCTGCTGCTTA
TATGGACACTGGTGATCCTGCGTGGAAATTGTCGGATATCATGATAGCAT
TGGCATATTTCCGAGCACTGGTCAAAGACCATCGCAACCTCTGCTCGCTC
GCAGACAATATGCCCAAAGACTGGCAATTTCAAGTCGTGGAATTAGAGAC
GACGTCTGAAGTTGTCATGGGAACGCAGTATCACGTGTATCCCGATGCAT
GGGTCGCAGGTGTGTGGAACAACATCCGTACATGTCGCTTGCTTTTGCAT
CAAGAGATCAAGCGGCAGTTGGAGAATGTCCTGGACACGCATCTATTCGA
AGCCGTCCAGTATCAGCAGTCCGTCATAATAATGCAACAGCTGGTTTCGG
ACATTTGTGCTTCTGTGCCTCAATACTGCGGCTATATACCGGATGTAGTT
GATGGTTCCCCAGACACGCCGCAAGCCACTTCGGTAGCAGATGGGTTGAC
ATCTGCTTACCAGTCCAGCAATGGTATCCCCGCTACCGCTGGTATCTACC
TCCTTTTCTGGCCTCTTCTATCTGCCGGGCAGATGGCCAATTCGGAAAAG
CAGCGAGGTTGGATAATTGATCGCATGCGATATATTGGTGAAACTACCGG
TATTCAGCAAGCCTTTGTATTTGAGGATATACTGAAACGGGCTGTGGACC
CTTTTCAATAAATGTCAGCTCATACCTTCCAGAACATTGGTCTCATCCGG
GGGCATTACGAGTATTTATCTGCATTCCCGATCGATGTCATGGCCGAGGA
AAGAGTTGTAGCGAGCCTCCGCGCCGTTGCACTGGCAGCTTATGCTACCA
AATTCCAACATTTTGTCCTTCTCAAAAAAGCTAGACAGTATTACGTTTCA
GCACTTCGACATATCAACGTGGCCTTGTTATCTCGCCGTGAAGCAGCAAA
ATATGCCACCATCATCTCGATTCTATTTCTGAACACCTTTGAGGCCCTGA
CTTGTGAAAGCAGAGACTTCCCCTATCAAAGAGAGACTCACTTGAGGGGG
GTAGCATCCATATTGGAATTCCGAGGAGTGGAGCTTGTCCAATCTCGTCG
CGGACTCCAATTATTTCGACAAACTCTTCTTTGCATCTCGGTGACCTGCC
TAATGCGCTCTTTTCGAATACCCATGGGACTGGTCAAGCTTCACCGCCAC
GCTGCTGCTTATATGGACACTGGTGATCCTGCGTGGAAATTGTCGGATAT
CATGATAGCATTGGCATATTTCCGAGCACTGGTCAAAGACCATCGCAACC
TCTGCTCGCTCGCAGACAATATGCCCAAAGACTGGCAATTTCAAGTCGTG
GAATTAGAGACGACGTCTGAAGTTGTCATGGGAACGCAGTATCACGTGTA
TCCCGATGCATGGGTCGCAGGTGTGTGGAACAACATCCGTACATGTCGCT
TGCTTTTGCATCAAGAGATCAAGCGGCAGTTGGAGAATGTCCTGGACACG
CATCTATTCGAAGCCGTCCAGTATCAGCAGTCCGTCATAATAATGCAACA
GCTGGTTTCGGACATTTGTGCTTCTGTGCCTCAATACTGCGGCTATATAC
CGGATGTAGTTGATGGTTCCCCAGACACGCCGCAAGCCACTTCGGTAGCA
GATGGGTTGACATCTGCTTACCAGTCCAGCAATGGTATCCCCGCTACCGC
TGGTATCTACCTCCTTTTCTGGCCTCTTCTATCTGCCGGGCAGATGGCCA
ATTCGGAAAAGCAGCGAGGTTGGATAATTGATCGCATGCGATATATTGGT
GAAACTACCGGTATTCAGCAAGCCTTTGTATTTGAGGATATACTGAAACG
GGCTGTGGACCCTTTTCAATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009502KJC3_009502Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009502-T2KJC3_009502-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009502-T2.utr5p1KJC3_009502-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_009502-T2.utr5p2KJC3_009502-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_009502-T2.utr5p3KJC3_009502-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009502-T2.exon1KJC3_009502-T2.exon1Aspergillus niger KJC3exon
KJC3_009502-T2.exon2KJC3_009502-T2.exon2Aspergillus niger KJC3exon
KJC3_009502-T2.exon3KJC3_009502-T2.exon3Aspergillus niger KJC3exon
KJC3_009502-T2.exon4KJC3_009502-T2.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009502-T2.cdsKJC3_009502-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009502-T2.utr3p1KJC3_009502-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_7.4
DBxrefInterPro:IPR021858
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:576480..578420 +
Powered by Drupal