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KJC3_009547-T1, KJC3_009547-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009547-T1
Unique NameKJC3_009547-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:728905..731858-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009547-T1 ID=KJC3_009547-T1|Name=KJC3_009547-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2954bp|location=Sequence derived from alignment at ch7:728905..731858- (Aspergillus niger KJC3)
GTCTTCTAGATGCATTGGTCATCTTAACCACGCGCTTGGACGATATTTAA
GAGTCAAAGTTTGACGGTGTCAAGATCTACTACCTCCTGTTGTACTGCAA
TTGGATCTAGCTTCAAGAGACATACTCTGTAATGATCTTCCAACAGCCTC
AGGCAGAACTGAGAGAACAGGCGGTGTGTCATTCTGCTGGCAGTACGCTC
TGCCTTAGCCCAGAACGGCAGGCGGGGTGATGACACTCAGGCTGATAAGC
GACTGGTGAGGCTGCGAGCCATGGGTTGCTTGGATCGCTTTCCACCTAAT
AAGCTTTCCTTGTTCTCAGATCTACATCTGGCTTGGCATATGATACGCCT
ATGGAAACCTTGTATTGATGATGACCAAGCGAAGAAGAGCATCGGGACCA
AGATCGAGGACAGGGTGTTCCACTTGCAGGTACAAGCCGGAGCATTGGGC
GCCTAAAAAGCATCTTCCGGCTAACCAGCTCATCATGCAGAATTCGACAT
GTCAAGTGCGATGAACAAAAGCCCGAATGCTATCAGTGCAAGCGCACGGG
GAGAAAGTGCGATGGATACAGTGAATCACGTCCAGGGAACAACCACCAGC
CTGTCGTCCCCAGTAAGCCAATGATGACCGTCGACCATCGCATGGTCCTT
CGACCAGGAACACAAAAGGAGCGACATTATTTGTACTTCTTCAGCTCACA
GACGGCTCGGGCGCTATCCGGGGTATTTGAGTCTGATCTCTGGATGCGCC
ACCTCCCCCAACTGAGCGAGTGTGAACCTGTCGTCAGGCATGCCACGGCG
GCAGTAAGCGCGGCCCATGAGCGGGCGCTTGTGCTACAGCGAAATCCATC
ATCCACTGCGGACCGCCGAGCCGCTAATGATCGCTTCATTATATTTCATT
ATAATGAGGCCATTCGACATTTGAGAACCTATCTTGTTTCGCAAAACCCT
AGAATCGATCTTCTGGTCATCACATGTTTTCTTTTTGTGTGCTTGGAGAT
GCTGAATGGTAATCACAAGCAATCCCTGGACCACCTCGAAGCGGGCCTGA
AGATAGTTCAGAGCGTCATAGGAAGACTGCAACCTCTAGGAAGTAAACTA
AATGCGACTTATCATGAGTTATGGAAATTAAGTCTTCGACTGAACATCCA
GCTCGCAATGAACGGACGGCCAATGGTTGCCCTTGATATTAAGCCAACAT
ATCCCGAAGTGAAACGCTCAGATGGAAGGCCCGTTTGGTCGGATATTTAC
TGGGCTCAACACGCACTCTATAAGCTCATGAACAAGACACTCATGTTCAT
CCGTTCTGCAGGGCACGAACGCACAGATCGCACACACTTGATGCCCCAAC
AGTCGGAGCTCAGGAAGGAATTTCAAACATGGAGAAGTGCCTTGGAAAAC
TATGCAAATGAAGCAGAAAACTCCCGAAAAGGCGACCGGCGAGGTCTGTT
CTTCTTGCGTTCGTTGTATCTTGTCTCTTGGATATGGACGGAAACATGTC
TGGCCAGACAGGAAACGGTCTTCGACAACTATAATTCTGCTTTCGCGGAG
CTCGTCCACTGTGCCGGTCAAGTCATTGATCTTGACGATGCCACCGACCG
CAAGTCAACGAATTGCGCACCGGATATCTTCACTCTCGAAACACGTATTG
TTACAGGGCTGTACTATACAGCAATTAGGTGCCGGGATCCGATCATCCGT
CGGGAGGCTATCCGGCAGATGAACAGATGTACCAAACAAGAGGGTCTATG
GAATAAACATATTATAGTTAAGATTGCTCAATTGGTGATGGAACTGGAAG
AAGCCAATATGTCATCGCTGGACGTACAAGAAAGAGTTCCGGTCGACAGG
GACCGTATATATGAGACAGTCATTTCGTGTACGCAGGCAGAAAACCTTCG
AAGTACTCGCCAAGTTATCCTGCTTTCGAAGCCTAACGGACCAGATGGCG
CGTGGCTAACTAGGGTTCGATTTGTGGACTGGGAGTAGGAATCATGATAT
GCTTGTCTTGAGCTGACTGTTCAGATTCCTGTACTGCATTGCGTGAGCTG
TGTCAGGTATTCATGACAGCTGTTACCAAATATTCGATGGCCGGTCAGTT
ATAATGTTGTACGATGCTTAGAACTATGTCCAGACCACTTTATGATATAA
CAATCACGCGCTTATTAATGCCAGGAATCGGGCGTGAGCTCTCGCTTAAC
CAAGTACATACTCTCGGGCCACCACATTTCGCTACTGTCAGCCAACTGGG
AGAGGACATTCTGTGTTTTCATCAAAGAGATGACTTGGCTGAGCTCCCAC
TGTCCAATATTACTGATCCACCACACCCCATCCAATAACATGACTAAAAC
CAGCCAATGAGCGAATATATCCATAGCCAGGATATGTATCGGAGTGACCA
TTAATGGCTCCCTGGTTGCGGATGAAGCCGGTAGTGTTGTACTCTCGTTC
CTAGCTTCTACAGTAGGAGAATCCAATACCGATCGCACAATGTTGAGAAA
CTCGGTCGGAGCCTTGTTCAAAAAAGACATAATGATACGTCGGAGAATTT
GCGGTGCCTCCATAGACGTGACACTGATCATGTATCGAGCCACCCATGGT
GAGACACCACGGGGACATCCAAACATCGAGGTGTGCTGAGTATTTGGAGA
CGCTGTGAACACAACCTTCTTCTTAACACTTGCCCCTGGCGATAGCGCTG
CTGATGCACAGCTCTCCAGGATATTTATGGTTTCCAGTAATGCGTGAGCC
CGTCGCTGGCCAATCGCGCTACATAAAGCAGAGGAACGCTGCTCTGCAGT
TGTGCGTTCTGCTCTCCTACGAAGATTTCCAAGAGCTCGATTACAGGTAG
ATGCAACGAGCGGGAGGAATAAGCTCTTCGTTTTCGGAGATGGACCGCCT
TGCGGTGATGAAGGACTTGATGTTGTTCCATGGGACTCTGATCCCGTATC
CACC
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Coding sequence (CDS) from alignment at ch7:728905..731858-

>KJC3_009547-T1 ID=KJC3_009547-T1|Name=KJC3_009547-T1|organism=Aspergillus niger KJC3|type=CDS|length=3120bp|location=Sequence derived from alignment at ch7:728905..731858- (Aspergillus niger KJC3)
AATTCGACATGTCAAGTGCGATGAACAAAAGCCCGAATGCTATCAGTGCA
AGCGCACGGGGAGAAAGTGCGATGGATACAGTGAATCACGTCCAGGGAAC
AACCACCAGCCTGTCGTCCCCAGTAAGCCAATGATGACCGTCGACCATCG
CATGGTCCTTCGACCAGGAACACAAAAGGAGCGACATTATTTGTACTTCT
TCAGCTCACAGACGGCTCGGGCGCTATCCGGGGTATTTGAGTCTGATCTC
TGGATGCGCCACCTCCCCCAACTGAGCGAGTGTGAACCTGTCGTCAGGCA
TGCCACGGCGGCAGTAAGCGCGGCCCATGAGCGGGCGCTTGTGCTACAGC
GAAATCCATCATCCACTGCGGACCGCCGAGCCGCTAATGATCGCTTCATT
ATATTTCATTATAATGAGGCCATTCGACATTTGAGAACCTATCTTGTTTC
GCAAAACCCTAGAATCGATCTTCTGGTCATCACATGTTTTCTTTTTGTGT
GCTTGGAGATGCTGAATGGTAATCACAAGCAATCCCTGGACCACCTCGAA
GCGGGCCTGAAGATAGTTCAGAGCGTCATAGGAAGACTGCAACCTCTAGG
AAGTAAACTAAATGCGACTTATCATGAGTTATGGAAATTAAGTCTTCGAC
TGAACATCCAGCTCGCAATGAACGGACGGCCAATGGTTGCCCTTGATATT
AAGCCAACATATCCCGAAGTGAAACGCTCAGATGGAAGGCCCGTTTGGTC
GGATATTTACTGGGCTCAACACGCACTCTATAAGCTCATGAACAAGACAC
TCATGTTCATCCGTTCTGCAGGGCACGAACGCACAGATCGCACACACTTG
ATGCCCCAACAGTCGGAGCTCAGGAAGGAATTTCAAACATGGAGAAGTGC
CTTGGAAAACTATGCAAATGAAGCAGAAAACTCCCGAAAAGGCGACCGGC
GAGGTCTGTTCTTCTTGCGTTCGTTGTATCTTGTCTCTTGGATATGGACG
GAAACATGTCTGGCCAGACAGGAAACGGTCTTCGACAACTATAATTCTGC
TTTCGCGGAGCTCGTCCACTGTGCCGGTCAAGTCATTGATCTTGACGATG
CCACCGACCGCAAGTCAACGAATTGCGCACCGGATATCTTCACTCTCGAA
ACACGTATTGTTACAGGGCTGTACTATACAGCAATTAGGTGCCGGGATCC
GATCATCCGTCGGGAGGCTATCCGGCAGATGAACAGATGTACCAAACAAG
AGGGTCTATGGAATAAACATATTATAGTTAAGATTGCTCAATTGGTGATG
GAACTGGAAGAAGCCAATATGTCATCGCTGGACGTACAAGAAAGAGTTCC
GGTCGACAGGGACCGTATATATGAGACAGTCATTTCGTGTACGCAGGCAG
AAAACCTTCGAAGTACTCGCCAAGTTATCCTGCTTTCGAAGCCTAACGGA
CCAGATGGCGCGTGGCTAACTAGGGTTCGATTTGTGGACTGGGAGTAGAT
GATGACCAAGCGAAGAAGAGCATCGGGACCAAGATCGAGGACAGGGTGTT
CCACTTGCAGAATTCGACATGTCAAGTGCGATGAACAAAAGCCCGAATGC
TATCAGTGCAAGCGCACGGGGAGAAAGTGCGATGGATACAGTGAATCACG
TCCAGGGAACAACCACCAGCCTGTCGTCCCCAGTAAGCCAATGATGACCG
TCGACCATCGCATGGTCCTTCGACCAGGAACACAAAAGGAGCGACATTAT
TTGTACTTCTTCAGCTCACAGACGGCTCGGGCGCTATCCGGGGTATTTGA
GTCTGATCTCTGGATGCGCCACCTCCCCCAACTGAGCGAGTGTGAACCTG
TCGTCAGGCATGCCACGGCGGCAGTAAGCGCGGCCCATGAGCGGGCGCTT
GTGCTACAGCGAAATCCATCATCCACTGCGGACCGCCGAGCCGCTAATGA
TCGCTTCATTATATTTCATTATAATGAGGCCATTCGACATTTGAGAACCT
ATCTTGTTTCGCAAAACCCTAGAATCGATCTTCTGGTCATCACATGTTTT
CTTTTTGTGTGCTTGGAGATGCTGAATGGTAATCACAAGCAATCCCTGGA
CCACCTCGAAGCGGGCCTGAAGATAGTTCAGAGCGTCATAGGAAGACTGC
AACCTCTAGGAAGTAAACTAAATGCGACTTATCATGAGTTATGGAAATTA
AGTCTTCGACTGAACATCCAGCTCGCAATGAACGGACGGCCAATGGTTGC
CCTTGATATTAAGCCAACATATCCCGAAGTGAAACGCTCAGATGGAAGGC
CCGTTTGGTCGGATATTTACTGGGCTCAACACGCACTCTATAAGCTCATG
AACAAGACACTCATGTTCATCCGTTCTGCAGGGCACGAACGCACAGATCG
CACACACTTGATGCCCCAACAGTCGGAGCTCAGGAAGGAATTTCAAACAT
GGAGAAGTGCCTTGGAAAACTATGCAAATGAAGCAGAAAACTCCCGAAAA
GGCGACCGGCGAGGTCTGTTCTTCTTGCGTTCGTTGTATCTTGTCTCTTG
GATATGGACGGAAACATGTCTGGCCAGACAGGAAACGGTCTTCGACAACT
ATAATTCTGCTTTCGCGGAGCTCGTCCACTGTGCCGGTCAAGTCATTGAT
CTTGACGATGCCACCGACCGCAAGTCAACGAATTGCGCACCGGATATCTT
CACTCTCGAAACACGTATTGTTACAGGGCTGTACTATACAGCAATTAGGT
GCCGGGATCCGATCATCCGTCGGGAGGCTATCCGGCAGATGAACAGATGT
ACCAAACAAGAGGGTCTATGGAATAAACATATTATAGTTAAGATTGCTCA
ATTGGTGATGGAACTGGAAGAAGCCAATATGTCATCGCTGGACGTACAAG
AAAGAGTTCCGGTCGACAGGGACCGTATATATGAGACAGTCATTTCGTGT
ACGCAGGCAGAAAACCTTCGAAGTACTCGCCAAGTTATCCTGCTTTCGAA
GCCTAACGGACCAGATGGCGCGTGGCTAACTAGGGTTCGATTTGTGGACT
GGGAGTAGATGATGACCAAGCGAAGAAGAGCATCGGGACCAAGATCGAGG
ACAGGGTGTTCCACTTGCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009547KJC3_009547Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009547-T1KJC3_009547-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009547-T1.cdsKJC3_009547-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009547-T1.utr3p2KJC3_009547-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_009547-T1.utr3p1KJC3_009547-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009547-T1.exon3KJC3_009547-T1.exon3Aspergillus niger KJC3exon
KJC3_009547-T1.exon2KJC3_009547-T1.exon2Aspergillus niger KJC3exon
KJC3_009547-T1.exon1KJC3_009547-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009547-T1.utr5p1KJC3_009547-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:728905..731858 -
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