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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:748235..749197+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009554-T1 ID=KJC3_009554-T1|Name=KJC3_009554-T1|organism=Aspergillus niger KJC3|type=mRNA|length=963bp|location=Sequence derived from alignment at ch7:748235..749197+ (Aspergillus niger KJC3)
GAGCAATAAACCTTACGTCACAACCAGTGAAATAAGTTTTCTGCTCAATC
CACTACATTCAAATCCCAGCCATACCTACCAACCATACATACTTTTGACA
TTGCATCTCATCAATCTAAATAACTGCTAGCCATGTCGAATTTGGATTTC
TCCTGCGCCCTCGTCACCGGCGGCGGAGGCGGCCTAGGCAAAGCCATCGC
CTCCTATCTCCTGCAAAAGGGCAAAAAAGTCATAATCGCCGGCCGAACCG
AGAACACGCTACGCCGGACAGCAGAGGAAATCGGAGCGACGGATTACTTC
GTCCTCGACACAGGAGTCACAGCCCAAATACCAACATTCATCGAATCTCT
GCTCAAGAAGCACCCGGATCTCAACTGTCTAATCAATAACGCTGGCGTCC
AGCGGCCCCTCCAAGTCCTTAAAGATGACCCATCAGACTTCCTCACCAAA
GCCGACCAGGAAATCGATATCAACATCCGAGGACCCATGCACTTGACTCT
GGGGCTCTTGGAGCATTTCAAGAGTAAAGAAAGCGCTATGATAATGAACG
TCTCTTCCATTCTGGCATTCGTTCCATTCTCGGTGATCAATCCCGTGTAC
AATGGCACGAAAGCGTGGTTGCATTTCTGGTCGATGAACTTGCGGTCGCA
GTTGGCCAGTGGCGGGTATGATAAGATTAAGGTTGTTGAGGTTGCGCCGC
CGTCGGTGGGGACGGATTTGCATCGGGAACGGGAGGATCCCGATGACAAT
AAGAAGCATAAGAACCCTAATGCGCTGACGGTGGAGGAGTTTATGGATTT
CTTTAAGGAGGGGTTGGAGCGTGGGGATGCGGTTATTGCTCCGGGTATGA
GTCAGGAGTTTGTGGATAAGTGGGAAAAGGAGTTTGGGTCCGCTTATGTT
AAGTTGACGGGGGGTAATTAGGTAAATGTACAGCCGAATTTGTATTTATA
GATCTTGTTAGCT back to topCoding sequence (CDS) from alignment at ch7:748235..749197+ >KJC3_009554-T1 ID=KJC3_009554-T1|Name=KJC3_009554-T1|organism=Aspergillus niger KJC3|type=CDS|length=789bp|location=Sequence derived from alignment at ch7:748235..749197+ (Aspergillus niger KJC3)
ATGTCGAATTTGGATTTCTCCTGCGCCCTCGTCACCGGCGGCGGAGGCGG
CCTAGGCAAAGCCATCGCCTCCTATCTCCTGCAAAAGGGCAAAAAAGTCA
TAATCGCCGGCCGAACCGAGAACACGCTACGCCGGACAGCAGAGGAAATC
GGAGCGACGGATTACTTCGTCCTCGACACAGGAGTCACAGCCCAAATACC
AACATTCATCGAATCTCTGCTCAAGAAGCACCCGGATCTCAACTGTCTAA
TCAATAACGCTGGCGTCCAGCGGCCCCTCCAAGTCCTTAAAGATGACCCA
TCAGACTTCCTCACCAAAGCCGACCAGGAAATCGATATCAACATCCGAGG
ACCCATGCACTTGACTCTGGGGCTCTTGGAGCATTTCAAGAGTAAAGAAA
GCGCTATGATAATGAACGTCTCTTCCATTCTGGCATTCGTTCCATTCTCG
GTGATCAATCCCGTGTACAATGGCACGAAAGCGTGGTTGCATTTCTGGTC
GATGAACTTGCGGTCGCAGTTGGCCAGTGGCGGGTATGATAAGATTAAGG
TTGTTGAGGTTGCGCCGCCGTCGGTGGGGACGGATTTGCATCGGGAACGG
GAGGATCCCGATGACAATAAGAAGCATAAGAACCCTAATGCGCTGACGGT
GGAGGAGTTTATGGATTTCTTTAAGGAGGGGTTGGAGCGTGGGGATGCGG
TTATTGCTCCGGGTATGAGTCAGGAGTTTGTGGATAAGTGGGAAAAGGAG
TTTGGGTCCGCTTATGTTAAGTTGACGGGGGGTAATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009554-T1.utr5p1 | KJC3_009554-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009554-T1.utr3p1 | KJC3_009554-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:748235..749197 + |
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