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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:791406..792625- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009574-T1 ID=KJC3_009574-T1|Name=KJC3_009574-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1220bp|location=Sequence derived from alignment at ch7:791406..792625- (Aspergillus niger KJC3)
CATCGCCCCTATAGGGACCTCAACATGGGTGACAGAGGGTGCTCAGTGTA
TGACCACTGAGACAATTGTTTGGGGCCAAAGAGCCTCTGAGGCCTGAACC
TCCTTCGCATGTACAGTATATGGCACAATGCAAACGATGAAGCAGGATAT
AAAGCTGTTCCTTTCCACCATCGTTCTTGTTCTATTTCACCATCAACTCA
GTCACTCACTCAAACAATTCTTTCGTACTCGAATCCCCAGTCACTCCTTT
TCAAGCAAAATCCCGAAATAAACACATTCATTTCAACCCATACGTTATCT
CTTTGACAAATAACTCAAGATGTTGTTCAGCTTCAAGCCCACTATCCTCC
TAGCCCTGGCCCTCACCGCGGTTGCCAGCCCTATCGCCAACCCGACGGCC
GACGAGACCAACACGCTGGTCGCCCGCGCCCAGATGAAAGATGTCAACTG
TAACGGAAAGAAATTCGCCAAGCAGGACATTTACAACGCAATCCAGCAGG
CTAGAAAGGTTCAAACGGCCAAAGACAACCACGAAACAGGCTATGCAAAA
TACCCCGAGGAGAATTTCAACTTTGAGGGACTCTTTAAAGTCAGCACCAC
TCTGTATGAGTATCCTTTGGTCGCAGGGGGAGTTTACAGCGGCAGTAAGT
AATCTTTTTCATGTTTTTCCTTCCAGTTTATGTCTACTGGGGCCGGATTG
AAGAGGTGCTTGTAGGCTAATGAGCTTGGAATTGCGACAGAGTTGGGCGT
CAATCCAGACAAATACCGCGTTGTCATGAACGAGAAGTACGGTTATGTTG
GGTCATTGTATCACATTACGGGTAACTCTTTCAAAAAGTGCGATAATATT
GAGACCAGTCCTACCACCACCACCACTACTACTACTAAGACGACTACCAC
TGCTACTGCTAAGGCGACTACCAAGGCTAGTAGTGGTAAGTCGGGTCACA
AGTCTGGTAGCAACTCTCACAAGAAGGGTGGTAAGAACTAGAGTCATCCT
GTATGACTGCCTACGAAGGCAAGATGTTCCGACAGTGGATTGGCCGCGGA
AATAGTGTTGGCATTGCGCATGGCGGGAAGGGCGCACCCATCACTTCTGG
GGTGGGAATGGTGATGGAGCTTAGCTCGTCTTGAGTCCTGTATTTTAGTT
ATGTATGAGCGAACAGCTGTCTGACACTACTCCTGGAATATTCGTCCAGT
ATATACTTCTATAGACCCAG back to topCoding sequence (CDS) from alignment at ch7:791406..792625- >KJC3_009574-T1 ID=KJC3_009574-T1|Name=KJC3_009574-T1|organism=Aspergillus niger KJC3|type=CDS|length=1152bp|location=Sequence derived from alignment at ch7:791406..792625- (Aspergillus niger KJC3)
AGTTGGGCGTCAATCCAGACAAATACCGCGTTGTCATGAACGAGAAGTAC
GGTTATGTTGGGTCATTGTATCACATTACGGGTAACTCTTTCAAAAAGTG
CGATAATATTGAGACCAGTCCTACCACCACCACCACTACTACTACTAAGA
CGACTACCACTGCTACTGCTAAGGCGACTACCAAGGCTAGTAGTGGTAAG
TCGGGTCACAAGTCTGGTAGCAACTCTCACAAGAAGGGTGGTAAGAACTA
GATGTTGTTCAGCTTCAAGCCCACTATCCTCCTAGCCCTGGCCCTCACCG
CGGTTGCCAGCCCTATCGCCAACCCGACGGCCGACGAGACCAACACGCTG
GTCGCCCGCGCCCAGATGAAAGATGTCAACTGTAACGGAAAGAAATTCGC
CAAGCAGGACATTTACAACGCAATCCAGCAGGCTAGAAAGGTTCAAACGG
CCAAAGACAACCACGAAACAGGCTATGCAAAATACCCCGAGGAGAATTTC
AACTTTGAGGGACTCTTTAAAGTCAGCACCACTCTGTATGAGTATCCTTT
GGTCGCAGGGGGAGTTTACAGCGGCAAGTTGGGCGTCAATCCAGACAAAT
ACCGCGTTGTCATGAACGAGAAGTACGGTTATGTTGGGTCATTGTATCAC
ATTACGGGTAACTCTTTCAAAAAGTGCGATAATATTGAGACCAGTCCTAC
CACCACCACCACTACTACTACTAAGACGACTACCACTGCTACTGCTAAGG
CGACTACCAAGGCTAGTAGTGGTAAGTCGGGTCACAAGTCTGGTAGCAAC
TCTCACAAGAAGGGTGGTAAGAACTAGATGTTGTTCAGCTTCAAGCCCAC
TATCCTCCTAGCCCTGGCCCTCACCGCGGTTGCCAGCCCTATCGCCAACC
CGACGGCCGACGAGACCAACACGCTGGTCGCCCGCGCCCAGATGAAAGAT
GTCAACTGTAACGGAAAGAAATTCGCCAAGCAGGACATTTACAACGCAAT
CCAGCAGGCTAGAAAGGTTCAAACGGCCAAAGACAACCACGAAACAGGCT
ATGCAAAATACCCCGAGGAGAATTTCAACTTTGAGGGACTCTTTAAAGTC
AGCACCACTCTGTATGAGTATCCTTTGGTCGCAGGGGGAGTTTACAGCGG
CA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0004540 | ribonuclease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009574-T1.utr3p1 | KJC3_009574-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009574-T1.utr5p1 | KJC3_009574-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.5 |
| Note | SECRETED:SignalP(1-19) |
| DBxref | InterPro:IPR016191 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:791406..792625 - |
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