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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:852329..855752- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009593-T2 ID=KJC3_009593-T2|Name=KJC3_009593-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3424bp|location=Sequence derived from alignment at ch7:852329..855752- (Aspergillus niger KJC3)
GCAGGTCGGTTCGTCTGCCAGCATGCAGAAACCAGACAGAAACGGTCGCA
ACCTGCATAAAATAAATTAAAAGGACGAAATGCGGGGGTGGAGGCCATGC
TGACCACTGGTGGCCTGCGAGGTTCCTCGTCCAGGAACTTCCGCTGTTGG
GCACCGCCTACTTTCTCTCGGTGCAAACCGTGATATTCCCAGCGTCAACG
CTGCCGATGATCATCAAACCCCGAGGCTTGCCTGCTCACTTCCCCAAAAC
AGGAGCTGAGTTCCCGCGTGGATATATTGTGTTTTTCTTCCTCTTTACAA
TCTTCGTTTGATGGGCCTTTCTTTGCTTTTCGTCTACTTCATACCTCATT
GTTTCCCCGGACAATGACCACTGCAGCGACTAACTGATTACCTGCATAAC
TAACTGACTTGGACTACTTTGCCCGGTCTATTCGATCCACTTGCTATTTT
TCCCCCTCCTGACAAACAAAGATCCCTGCTCTCTGGTGCATCTAACCTAC
TGGTTTCCCTGCGACTCGGTGTCAATGGCCCCTTCGAGTTAATCTCGCCA
CCCCTAAAGTGTCTCAACGGGTACACTTCCCGACTATCCGTCAAACAAAA
ACTCCAGCAAACTATCCCCCGATCGCAACGCAATGTTTCACACGTTTGAA
GGGTTCGAGAACCCAACTCTTCCGGCTGCTGTGCGCGGACGCAATCAACG
TCAACAATCTGTCGGTCGCCGAGTCACGACGCTCCGCGCCTGCACATCTT
GTCGGCACCGAAAAATAAAGTGTGATGGTGAAAAGCCATGTGAAGCATGC
AGATGGTATAAAAAAGCAGACTTGTGTCAGTACTCTGATCCTCGGCCATC
TCGCAGGTGTGACTGTCCCCTTCTTCCATAGCAGCCGGCATTGAGGGACG
ACCCAAAACTGACAAATGTATCGATCAAGCAGGCATGTGGAGAAACTGTC
GACCACACTCGATGAATTCAGGGGAGTGCTTGACAAGCTCTTCCCTGGCA
TTCCAGCGGAGACCCTGGTCAACTTGCCTCGGGACAAGCTTCTGGAGCTG
ACAGGCAAGGGGCCTTCCCAGATGCAGACGCAAGCGCCACACCCGGCATC
CCCAGCAACCTCGGCATCGGTAGAGGCTCACGCATCGCCAGCATCCAGCG
AAGACGGCAATCTCGAGTCTCTACAGACAATACCTGATCAAACAACTGAT
GATCGTGAATTGAAAGGTTCTGAGCTAACGAGTACCGTATCCGACGACGT
TAACGCTTTATCTCTCTCGGCCAAACAGCCATCTTCCTATTTGGGTGTCT
CTTCCATCCATGCTGTGCTAAAGGTAATAGTATGGCTGGAGCCGAGCTCT
CTCTCTCATTTGTCTCGCGCACCCGCCACAGGAGTCCGTCGAGAATCTGT
CATGGACATTGCATCTCCAGAGGCCCAGGCCTGGCAGGTTTTTGGGTCAC
AGCCCCATCATGGCACGTCCACCCATAGCCCACTCCAGGTTCCCGAGACT
CAACTGCTCGATGCTTACTTCACCTACTTCCAACCTTTTGTTCCAATGCT
GGACGAACAATATTTTCGCCAAACGTATCTTTCTGCGCGCAGGAAAGACA
AGCAATGGCTCGCGTTACTTAACATTGTCTTTGCTTTGGGCAGCATAGCA
GCCACCCCGGCCGACGACATGTCCCATCAAGCATATTATATGCGGTCTAT
GAGCCATTTGAATTTGGAAAGCCTTGGATCACCACACGTGGAGACTATCC
AAGCTCTGGGCCTCATGGGTGGCTATTACCTTCACTATAGCAGCCAACCC
AACCTCGCGTACTCCATGATGGGAGCCGCGTTGCGCATGGCGGCTGCTCT
GGGGCTACATAAGGAAGTGTCAGATGGCCAGTATGGCAATGGCAGGAATA
GGCTATCTTCAGTTGACCATAAACGTCGGGTATGGTGGTCTCTTTTCTGT
CTGGACACGTGGGGTGGCATGACCTTGGGACGGCCAAGCATGGGTCGGCT
GGGTCCAGCAATCACCGTTAAGCTACCACATTACAGAGAAACAGTATGTG
ATACGTTGTGTGTTGTAATGGGTCTAACTGACATACTTAGGGCAATGTGC
TCGACCTTCTACCACTTTTGGAAAATGTTCGCTTTTGCAAGATCGCGACA
CAGATACAGGAGGTCCTGGCCGTGGCACCGCTGACAAAACCTCACGAAAT
GGCACATCTTGATAGCCAGCTTTTGGAATGGTATGATAACCTTCCTTATA
TTCTTAAAGACCATGAGCCATGCTCTGAGTCGATTGCGATCACGAGAACC
GTCATGAAGTGGCGCTATTACAACCAACGCATGCTCTTGTATCGCCCCAC
CCTGCTCAGCTATGCCATGCGCCGCGTACCATACATTGTGCTCAGGTCTG
AAGAAAGGACGGCAATTGAAAGATGTAGGGAGATTGCCGAGGCTACCATA
CAAGATGTAGCCGCCAAGGCACAATTCCATCAGATGTCAGGCTGGAACGC
AGTATGGCTTATCTTCCAGGCTGCTATGGTCCCTCTTCTAGGCTTGTTTC
TCAATGATGGTACGGTTGATGATCCAAGAGCGACAGCTGAAGCGTGCCAG
GCTCAAGTGGAAACAACAATGCTTGTCCTGGAGCGCTTGGAACCTTGGAG
TCCAGCCGCCAAATCAACGCTCGAGGCTGTTTCCCGAATATTTGAGGCTG
GTAAACGTGGCCCCAGCGTCATCGGGGAAGCCCACAGCATTAACAGCGGT
AGCTGTGTAACGTCTACTGAAGAGACTCTTGGCGCAGTTCCTGGGGTATC
TCCGATGCAAGTCGACTTTGGTCGCGCTATTCCACACGACAGTGGATTTG
TCGACCCATTTGAACCCCAGTTTATCAATGATTCTGCTGGACAGTATCTA
TGGGACTTTCTTAGTTGGAGCGATAGCAACTTGTTGCAGGGTTTGGCTGA
TATTGACAATGTCAACAATGGACCACTGTTTCCCCAGGAGGAGAGAAATG
CAAAGTATGGATCCAGCGACACTGCGTTTTTTGGAGGCCAATTGGGAGAT
TCAACATTTTTTATCAATTCAGGGCCGTCCTTCTACTAGGCTGTACTTAC
AGGGTGCAGCCTTATCGCTGCCGGTGTTCACTTTTGTCACATGGTGTTCT
ATTATTCACTCGCTCTATGTTTGTTTTGTTGTTCCCCGCCATATGTTAGC
GATCTCCACATTACAGAATTATTTATGATTGATGCATTTACGGGCGATTC
GGAGGATTCGGAGGATTTATGTCGAGAACACGGTATCACGATAGCAAAAA
GAACTGCTTCAGCAATATATTTTTGATCTACAAAGTGTATTCAAACTAGC
TATGGTTACATAGTAGGTTATGATATGGGTGGGCGCCTCCTCACTATGGA
TTGAGAATATAAAAGATACTTACG back to topCoding sequence (CDS) from alignment at ch7:852329..855752- >KJC3_009593-T2 ID=KJC3_009593-T2|Name=KJC3_009593-T2|organism=Aspergillus niger KJC3|type=CDS|length=3942bp|location=Sequence derived from alignment at ch7:852329..855752- (Aspergillus niger KJC3)
GGCAATGTGCTCGACCTTCTACCACTTTTGGAAAATGTTCGCTTTTGCAA
GATCGCGACACAGATACAGGAGGTCCTGGCCGTGGCACCGCTGACAAAAC
CTCACGAAATGGCACATCTTGATAGCCAGCTTTTGGAATGGTATGATAAC
CTTCCTTATATTCTTAAAGACCATGAGCCATGCTCTGAGTCGATTGCGAT
CACGAGAACCGTCATGAAGTGGCGCTATTACAACCAACGCATGCTCTTGT
ATCGCCCCACCCTGCTCAGCTATGCCATGCGCCGCGTACCATACATTGTG
CTCAGGTCTGAAGAAAGGACGGCAATTGAAAGATGTAGGGAGATTGCCGA
GGCTACCATACAAGATGTAGCCGCCAAGGCACAATTCCATCAGATGTCAG
GCTGGAACGCAGTATGGCTTATCTTCCAGGCTGCTATGGTCCCTCTTCTA
GGCTTGTTTCTCAATGATGGTACGGTTGATGATCCAAGAGCGACAGCTGA
AGCGTGCCAGGCTCAAGTGGAAACAACAATGCTTGTCCTGGAGCGCTTGG
AACCTTGGAGTCCAGCCGCCAAATCAACGCTCGAGGCTGTTTCCCGAATA
TTTGAGGCTGGTAAACGTGGCCCCAGCGTCATCGGGGAAGCCCACAGCAT
TAACAGCGGTAGCTGTGTAACGTCTACTGAAGAGACTCTTGGCGCAGTTC
CTGGGGTATCTCCGATGCAAGTCGACTTTGGTCGCGCTATTCCACACGAC
AGTGGATTTGTCGACCCATTTGAACCCCAGTTTATCAATGATTCTGCTGG
ACAGTATCTATGGGACTTTCTTAGTTGGAGCGATAGCAACTTGTTGCAGG
GTTTGGCTGATATTGACAATGTCAACAATGGACCACTGTTTCCCCAGGAG
GAGAGAAATGCAAAGTATGGATCCAGCGACACTGCGTTTTTTGGAGGCCA
ATTGGGAGATTCAACATTTTTTATCAATTCAGGGCCGTCCTTCTACTAGA
TGCAGACGCAAGCGCCACACCCGGCATCCCCAGCAACCTCGGCATCGGTA
GAGGCTCACGCATCGCCAGCATCCAGCGAAGACGGCAATCTCGAGTCTCT
ACAGACAATACCTGATCAAACAACTGATGATCGTGAATTGAAAGGTTCTG
AGCTAACGAGTACCGTATCCGACGACGTTAACGCTTTATCTCTCTCGGCC
AAACAGCCATCTTCCTATTTGGGTGTCTCTTCCATCCATGCTGTGCTAAA
GGTAATAGTATGGCTGGAGCCGAGCTCTCTCTCTCATTTGTCTCGCGCAC
CCGCCACAGGAGTCCGTCGAGAATCTGTCATGGACATTGCATCTCCAGAG
GCCCAGGCCTGGCAGGTTTTTGGGTCACAGCCCCATCATGGCACGTCCAC
CCATAGCCCACTCCAGGTTCCCGAGACTCAACTGCTCGATGCTTACTTCA
CCTACTTCCAACCTTTTGTTCCAATGCTGGACGAACAATATTTTCGCCAA
ACGTATCTTTCTGCGCGCAGGAAAGACAAGCAATGGCTCGCGTTACTTAA
CATTGTCTTTGCTTTGGGCAGCATAGCAGCCACCCCGGCCGACGACATGT
CCCATCAAGCATATTATATGCGGTCTATGAGCCATTTGAATTTGGAAAGC
CTTGGATCACCACACGTGGAGACTATCCAAGCTCTGGGCCTCATGGGTGG
CTATTACCTTCACTATAGCAGCCAACCCAACCTCGCGTACTCCATGATGG
GAGCCGCGTTGCGCATGGCGGCTGCTCTGGGGCTACATAAGGAAGTGTCA
GATGGCCAGTATGGCAATGGCAGGAATAGGCTATCTTCAGTTGACCATAA
ACGTCGGGTATGGTGGTCTCTTTTCTGTCTGGACACGTGGGGTGGCATGA
CCTTGGGACGGCCAAGCATGGGTCGGCTGGGTCCAGCAATCACCGTTAAG
CTACCACATTACAGAGAAACAGGCAATGTGCTCGACCTTCTACCACTTTT
GGAAAATGTTCGCTTTTGCAAGATCGCGACACAGATACAGGAGGTCCTGG
CCGTGGCACCGCTGACAAAACCTCACGAAATGGCACATCTTGATAGCCAG
CTTTTGGAATGGTATGATAACCTTCCTTATATTCTTAAAGACCATGAGCC
ATGCTCTGAGTCGATTGCGATCACGAGAACCGTCATGAAGTGGCGCTATT
ACAACCAACGCATGCTCTTGTATCGCCCCACCCTGCTCAGCTATGCCATG
CGCCGCGTACCATACATTGTGCTCAGGTCTGAAGAAAGGACGGCAATTGA
AAGATGTAGGGAGATTGCCGAGGCTACCATACAAGATGTAGCCGCCAAGG
CACAATTCCATCAGATGTCAGGCTGGAACGCAGTATGGCTTATCTTCCAG
GCTGCTATGGTCCCTCTTCTAGGCTTGTTTCTCAATGATGGTACGGTTGA
TGATCCAAGAGCGACAGCTGAAGCGTGCCAGGCTCAAGTGGAAACAACAA
TGCTTGTCCTGGAGCGCTTGGAACCTTGGAGTCCAGCCGCCAAATCAACG
CTCGAGGCTGTTTCCCGAATATTTGAGGCTGGTAAACGTGGCCCCAGCGT
CATCGGGGAAGCCCACAGCATTAACAGCGGTAGCTGTGTAACGTCTACTG
AAGAGACTCTTGGCGCAGTTCCTGGGGTATCTCCGATGCAAGTCGACTTT
GGTCGCGCTATTCCACACGACAGTGGATTTGTCGACCCATTTGAACCCCA
GTTTATCAATGATTCTGCTGGACAGTATCTATGGGACTTTCTTAGTTGGA
GCGATAGCAACTTGTTGCAGGGTTTGGCTGATATTGACAATGTCAACAAT
GGACCACTGTTTCCCCAGGAGGAGAGAAATGCAAAGTATGGATCCAGCGA
CACTGCGTTTTTTGGAGGCCAATTGGGAGATTCAACATTTTTTATCAATT
CAGGGCCGTCCTTCTACTAGATGCAGACGCAAGCGCCACACCCGGCATCC
CCAGCAACCTCGGCATCGGTAGAGGCTCACGCATCGCCAGCATCCAGCGA
AGACGGCAATCTCGAGTCTCTACAGACAATACCTGATCAAACAACTGATG
ATCGTGAATTGAAAGGTTCTGAGCTAACGAGTACCGTATCCGACGACGTT
AACGCTTTATCTCTCTCGGCCAAACAGCCATCTTCCTATTTGGGTGTCTC
TTCCATCCATGCTGTGCTAAAGGTAATAGTATGGCTGGAGCCGAGCTCTC
TCTCTCATTTGTCTCGCGCACCCGCCACAGGAGTCCGTCGAGAATCTGTC
ATGGACATTGCATCTCCAGAGGCCCAGGCCTGGCAGGTTTTTGGGTCACA
GCCCCATCATGGCACGTCCACCCATAGCCCACTCCAGGTTCCCGAGACTC
AACTGCTCGATGCTTACTTCACCTACTTCCAACCTTTTGTTCCAATGCTG
GACGAACAATATTTTCGCCAAACGTATCTTTCTGCGCGCAGGAAAGACAA
GCAATGGCTCGCGTTACTTAACATTGTCTTTGCTTTGGGCAGCATAGCAG
CCACCCCGGCCGACGACATGTCCCATCAAGCATATTATATGCGGTCTATG
AGCCATTTGAATTTGGAAAGCCTTGGATCACCACACGTGGAGACTATCCA
AGCTCTGGGCCTCATGGGTGGCTATTACCTTCACTATAGCAGCCAACCCA
ACCTCGCGTACTCCATGATGGGAGCCGCGTTGCGCATGGCGGCTGCTCTG
GGGCTACATAAGGAAGTGTCAGATGGCCAGTATGGCAATGGCAGGAATAG
GCTATCTTCAGTTGACCATAAACGTCGGGTATGGTGGTCTCTTTTCTGTC
TGGACACGTGGGGTGGCATGACCTTGGGACGGCCAAGCATGGGTCGGCTG
GGTCCAGCAATCACCGTTAAGCTACCACATTACAGAGAAACA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009593-T2.utr3p1 | KJC3_009593-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.6 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:852329..855752 - |
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