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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:938600..941793+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009627-T1 ID=KJC3_009627-T1|Name=KJC3_009627-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3194bp|location=Sequence derived from alignment at ch7:938600..941793+ (Aspergillus niger KJC3) CTGCCACCCTCTCGCCCAATTCCCCCAACTTCAAACAGTGGGATATGATA
CAGCGGTAGTATGCCGGACCTGCCACGGACGCTCGCTCGGTCCTGGTCGT
CGACGCTCAAGCTCCCGAAATCGACGTTCCCTGCACGCGTGACGCCGGCC
GATCGGACAAAATACTTGCAGCGATGCACCGACGACCTCTACGCCTGGCA
ACAGCGTGAAAGACCAGCCAGCCAGCCGTTCGTCCTGCACGATGGACCAC
CATACGCAAACGGTGACCTTCACATCGGCCATGCTCTCAACAAAGTACTA
AAAGACATCATTTGCCGTGTGCAGCTCGGTCTGGGAAAGCGGATTCGATA
CGTACCGGGATGGGACTGTCACGGCTTGCCGATAGAGCTGAAGGCTCTAG
AAGCGCAAAAGGAACTACAGGGACAGGAACACAATGGACCCGTTAGCGCA
GCGCTGGTACGCAAGGCTGCGCGCAAATTGGCTGATCGGACGGTCAAGGC
GCAGATGAAGGGATTCCGGAGCTTCGCGGTCATGGCGGACTGGGAGAACC
ATTGGAAGACTATGGATAAGGCGTTTGAGAAGAGACAACTTGGCGTTTTT
CGGGAAATGGTCGATAAGGGATTGATCTATCGGAGATTCAAGCCGGTTTA
CTGGTCGCCGTCTACTGGGACGGCACTGGCGGAGGCCGAGCTGGAATACA
AGGAAGATCATGTTTCAACGGCTGCTTTGGTGAAATACCCTCTTGCTAGC
ATCCCGGAGCACCTGGCACAGGACCCTTTGCTTAAGGATAAGGAAATCAG
CGCTGTTATTTGGACTACGACTCCCTGGACACTCCCGGCAAACGCGGCTA
TCTCGGTTCACCCGTCTTTGGATTACACGATTGTCGAATCAGATACGCAG
GGTTATCTCCTCATTGCGCAATCTCGGCTGGAATACCTCGAGGGTATCCT
GAAGGAGGATTTGTCGGTCATTGTGCCAGCTATTCCTGGCTCGAAGCTTG
CTGATCAGACTACATACCGACCTCTGTTCAAGGGATCCGATGCGGAGCCG
CAACCCATCATTGCTGCGGACTTCGTCACCGCCGACTCCGGATCAGGTCT
CGTTCATTGCGCCCCAGGCCACGGTATGGAGGACTACGAAGCCTGCTTAT
CCCGAGGTATCCCCGCTTTCGCCCCCGTGGACGACAACGGCAAATTCACC
GACAAGGCCATGCCCAGCGACCCGACAAGGCTCAGTGGAAAGAGCGTCCT
GAGTGATGGAAACGCTGCTGTTCTCGAATACGTTGAATCCCAAGGCCTGC
TGATCACAAAGCACCGCTACGAGCACAAATATCCCTACGACTGGCGGTCC
AAGCTTCCCATCATCATCCGCGCCACAGAGCAATGGTTCGCCGACGTAGC
CGACATCCGTGGCAGCGCCATGACAGCTCTCGAGGATGTCAACTTCGTGC
CTACTGCCGGAAGACAGCGACTGGAGAACTTCGTCAAGAACCGCAGCGAA
TGGTGTATCTCGCGTCAACGCGCCTGGGGAGTCCCTATCCCGGCGCTTTA
CCACCGCGGTACAGGCGATGCTTTGCTTACCAAGGACAGTGTATCTCACA
TCATGAATGTCATCGAAGAGCGTGGCATTGACGCATGGTGGACAGACGAC
GCCAACGACGAGGCGTGGATCCCACCAGCTCTGCGAGACGCCTCTGGGCC
CGGCTACAGACGCGGAACCGATACCATGGACGTGTGGTTCGACAGCGGCA
CCAGCTGGACCGAGATCGACCTTCCTTACCGTGACGGCGGATATCCCGCA
GACGTCTACCTGGAGGGCACCGACCAACACAGAGGATGGTTCCAGTCCGG
TCTCCTCACCTTCATTGCCCACCAGCTCGCGTCCGGACACACCGCATCCC
CTCGCGCGCCCTTCAAGAACCTCGTCACCCATGGTTTTACCCTGGATGAG
GAGGGACGCAAGATGAGCAAGTCGATCGGCAATGTGATCCAGCCAGAGTC
AATCATGGATGGCACGCTCTTGCCACCCCTCAAGCCGAGAAAAGGCAAGG
GGAAAAAGCAAGCCGAGAACCAGGCACCGGTCTACGACGCGCTTGGCCCG
GATGCTCTGCGAATGTGGGTTGCAAGCAGCGACTACACGCGGGATGTCGT
GATTGGCAAGCAAGTCCTTCAGACGGTCAACACCAGCTTGCACAAGTACC
GTGTGACATTCAAGCTGCTGCTTGGTGCCTTGTCTGACTTCCGTCTGGAG
GATCGTCTTCCCTATGATCAGCTGCAGCAAGTGGATCGCATCGCTCTGAA
ACATCTGTCTGACACCGTCTTGGCCTGCCAGAAGGCCTGCGAGAACTTTG
AGTTTTACAAGGCTGTGAATGCCATTAACCGCTGGGCTAACCTTGAGTTT
TCTGCATTCTACATGGAAGCTATCAAGGACCGTCTTTACACCTACGCTGA
GAACAGCACCAGCAGAAGGGCTGCCCAGACGACCTTGTTCCACATCTACC
ACCACCTTCAAGAGGTGCTGGCTCCCATCACTCCGTTGTTGGTCGAGGAG
ACCTGGGAGCATACGCCCGAGGCCATCAAGACCCACTGCGAGCATCCGCT
GAAACGGATTGTTTCCGCGCCCGCCTCTGAATGGCAGAACCAGGCTCTGG
AAGCGGACTATCAGGATATTGTGGCCGTCAACTCCGTGGTCAAGGCGATT
CAAGAAAAGGCCCGTGGCCAGAAGCAGATGGGCTCTTCCCTGCAATCGTT
CGTCCACATCGTTCTTCCCCACGGCGCGACGGGCGAATCGGTCTTCGCGC
GCCTCCAGTCCGAGCTGCCTGATGTGTTTGTTGTCTCGTCGGTCAGCCTC
GGGGCGCACGAGGAGCCGATCCCGGAGGACATTCGCAATGCGGAGTGGCA
GTATAGTGAGGAGTACGAGCTGCCGAGTGGCGGCAGAGGAACGGTACATG
TGTATACCCCGCAAGCGAGCAAGTGTCCGCGCTGCTGGCGTTATGTGGTG
CCCGAGTCAGAGGCGGCGGAAGAGACGGTGTGTGGGCGCTGCGAGGAGGT
GGTGCAAGAGTTGGATGCATCGAGCTGAGTGGTCAGTTCCTTGTTAGCAT
TTGAATCGTACAAGCTAGTGCTGCATGTATATTATAATAGTAACAAATAG
CATAGATCTGGGTTAGGTTCCCTGGCACGCCAGCATTAGCGGCA back to topCoding sequence (CDS) from alignment at ch7:938600..941793+ >KJC3_009627-T1 ID=KJC3_009627-T1|Name=KJC3_009627-T1|organism=Aspergillus niger KJC3|type=CDS|length=3018bp|location=Sequence derived from alignment at ch7:938600..941793+ (Aspergillus niger KJC3) ATGCCGGACCTGCCACGGACGCTCGCTCGGTCCTGGTCGTCGACGCTCAA GCTCCCGAAATCGACGTTCCCTGCACGCGTGACGCCGGCCGATCGGACAA AATACTTGCAGCGATGCACCGACGACCTCTACGCCTGGCAACAGCGTGAA AGACCAGCCAGCCAGCCGTTCGTCCTGCACGATGGACCACCATACGCAAA CGGTGACCTTCACATCGGCCATGCTCTCAACAAAGTACTAAAAGACATCA TTTGCCGTGTGCAGCTCGGTCTGGGAAAGCGGATTCGATACGTACCGGGA TGGGACTGTCACGGCTTGCCGATAGAGCTGAAGGCTCTAGAAGCGCAAAA GGAACTACAGGGACAGGAACACAATGGACCCGTTAGCGCAGCGCTGGTAC GCAAGGCTGCGCGCAAATTGGCTGATCGGACGGTCAAGGCGCAGATGAAG GGATTCCGGAGCTTCGCGGTCATGGCGGACTGGGAGAACCATTGGAAGAC TATGGATAAGGCGTTTGAGAAGAGACAACTTGGCGTTTTTCGGGAAATGG TCGATAAGGGATTGATCTATCGGAGATTCAAGCCGGTTTACTGGTCGCCG TCTACTGGGACGGCACTGGCGGAGGCCGAGCTGGAATACAAGGAAGATCA TGTTTCAACGGCTGCTTTGGTGAAATACCCTCTTGCTAGCATCCCGGAGC ACCTGGCACAGGACCCTTTGCTTAAGGATAAGGAAATCAGCGCTGTTATT TGGACTACGACTCCCTGGACACTCCCGGCAAACGCGGCTATCTCGGTTCA CCCGTCTTTGGATTACACGATTGTCGAATCAGATACGCAGGGTTATCTCC TCATTGCGCAATCTCGGCTGGAATACCTCGAGGGTATCCTGAAGGAGGAT TTGTCGGTCATTGTGCCAGCTATTCCTGGCTCGAAGCTTGCTGATCAGAC TACATACCGACCTCTGTTCAAGGGATCCGATGCGGAGCCGCAACCCATCA TTGCTGCGGACTTCGTCACCGCCGACTCCGGATCAGGTCTCGTTCATTGC GCCCCAGGCCACGGTATGGAGGACTACGAAGCCTGCTTATCCCGAGGTAT CCCCGCTTTCGCCCCCGTGGACGACAACGGCAAATTCACCGACAAGGCCA TGCCCAGCGACCCGACAAGGCTCAGTGGAAAGAGCGTCCTGAGTGATGGA AACGCTGCTGTTCTCGAATACGTTGAATCCCAAGGCCTGCTGATCACAAA GCACCGCTACGAGCACAAATATCCCTACGACTGGCGGTCCAAGCTTCCCA TCATCATCCGCGCCACAGAGCAATGGTTCGCCGACGTAGCCGACATCCGT GGCAGCGCCATGACAGCTCTCGAGGATGTCAACTTCGTGCCTACTGCCGG AAGACAGCGACTGGAGAACTTCGTCAAGAACCGCAGCGAATGGTGTATCT CGCGTCAACGCGCCTGGGGAGTCCCTATCCCGGCGCTTTACCACCGCGGT ACAGGCGATGCTTTGCTTACCAAGGACAGTGTATCTCACATCATGAATGT CATCGAAGAGCGTGGCATTGACGCATGGTGGACAGACGACGCCAACGACG AGGCGTGGATCCCACCAGCTCTGCGAGACGCCTCTGGGCCCGGCTACAGA CGCGGAACCGATACCATGGACGTGTGGTTCGACAGCGGCACCAGCTGGAC CGAGATCGACCTTCCTTACCGTGACGGCGGATATCCCGCAGACGTCTACC TGGAGGGCACCGACCAACACAGAGGATGGTTCCAGTCCGGTCTCCTCACC TTCATTGCCCACCAGCTCGCGTCCGGACACACCGCATCCCCTCGCGCGCC CTTCAAGAACCTCGTCACCCATGGTTTTACCCTGGATGAGGAGGGACGCA AGATGAGCAAGTCGATCGGCAATGTGATCCAGCCAGAGTCAATCATGGAT GGCACGCTCTTGCCACCCCTCAAGCCGAGAAAAGGCAAGGGGAAAAAGCA AGCCGAGAACCAGGCACCGGTCTACGACGCGCTTGGCCCGGATGCTCTGC GAATGTGGGTTGCAAGCAGCGACTACACGCGGGATGTCGTGATTGGCAAG CAAGTCCTTCAGACGGTCAACACCAGCTTGCACAAGTACCGTGTGACATT CAAGCTGCTGCTTGGTGCCTTGTCTGACTTCCGTCTGGAGGATCGTCTTC CCTATGATCAGCTGCAGCAAGTGGATCGCATCGCTCTGAAACATCTGTCT GACACCGTCTTGGCCTGCCAGAAGGCCTGCGAGAACTTTGAGTTTTACAA GGCTGTGAATGCCATTAACCGCTGGGCTAACCTTGAGTTTTCTGCATTCT ACATGGAAGCTATCAAGGACCGTCTTTACACCTACGCTGAGAACAGCACC AGCAGAAGGGCTGCCCAGACGACCTTGTTCCACATCTACCACCACCTTCA AGAGGTGCTGGCTCCCATCACTCCGTTGTTGGTCGAGGAGACCTGGGAGC ATACGCCCGAGGCCATCAAGACCCACTGCGAGCATCCGCTGAAACGGATT GTTTCCGCGCCCGCCTCTGAATGGCAGAACCAGGCTCTGGAAGCGGACTA TCAGGATATTGTGGCCGTCAACTCCGTGGTCAAGGCGATTCAAGAAAAGG CCCGTGGCCAGAAGCAGATGGGCTCTTCCCTGCAATCGTTCGTCCACATC GTTCTTCCCCACGGCGCGACGGGCGAATCGGTCTTCGCGCGCCTCCAGTC CGAGCTGCCTGATGTGTTTGTTGTCTCGTCGGTCAGCCTCGGGGCGCACG AGGAGCCGATCCCGGAGGACATTCGCAATGCGGAGTGGCAGTATAGTGAG GAGTACGAGCTGCCGAGTGGCGGCAGAGGAACGGTACATGTGTATACCCC GCAAGCGAGCAAGTGTCCGCGCTGCTGGCGTTATGTGGTGCCCGAGTCAG AGGCGGCGGAAGAGACGGTGTGTGGGCGCTGCGAGGAGGTGGTGCAAGAG TTGGATGCATCGAGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0000049 | tRNA binding |
GO:0004812 | aminoacyl-tRNA ligase activity |
GO:0002161 | aminoacyl-tRNA editing activity |
GO:0005524 | ATP binding |
GO:0000166 | nucleotide binding |
GO:0004822 | isoleucine-tRNA ligase activity |
Vocabulary: Biological Process
Term | Definition |
GO:0006418 | tRNA aminoacylation for protein translation |
GO:0006428 | isoleucyl-tRNA aminoacylation |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009627-T1.utr5p1 | KJC3_009627-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009627-T1.utr3p1 | KJC3_009627-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | BUSCO:EOG092609JB |
DBxref | InterPro:IPR009080 |
DBxref | InterPro:IPR033708 |
DBxref | InterPro:IPR023585 |
DBxref | InterPro:IPR001412 |
DBxref | InterPro:IPR013155 |
DBxref | InterPro:IPR002300 |
DBxref | InterPro:IPR014729 |
DBxref | InterPro:IPR009008 |
DBxref | InterPro:IPR002301 |
DBxref | PFAM:PF00133 |
DBxref | PFAM:PF08264 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:938600..941793 + |
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