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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:957681..959268- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009630-T1 ID=KJC3_009630-T1|Name=KJC3_009630-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1588bp|location=Sequence derived from alignment at ch7:957681..959268- (Aspergillus niger KJC3)
CTAATCAGACTTCATCCATCTTCTTTGTGAGGTGCATGATTATCCAACAA
GTTCTGTAAAGCCGCTCGATAAGTTCGCGGTCTTCAAGCTCTGATTATCT
CTTGCCTCGCAAACAAACTCACTCTTCTGCACCGAACCATTCTATCATCT
CCCTCATTGCCCAACACTCGAACAACCTGACCTCAGTTGTTGACCTACGG
TGTCCCTCGAACAGATCTCAACTTGGGACTACATAATTGCTAGTGCCACA
ATTTGCTACTTATTATAATAGCGATGGCTTCTCCAAGTGGCGAAAGGTAC
CTCAAACACTCGCCGTTCTCATGACACTTTCCACTTTTGTGCCTGCTCTT
TCTCTTTTTAGTCCTTGGATAGCTAACGTGCATGCTTTAAGACCCACGCC
CCCTCTCCACCAGCTGGATTCTAGTCATATTCCAGAGAGTTATCACAAAC
AACGCATCTTAAACTATATCAATAATATCAATCCCGCTCACTGGCCTGAA
ATTGACATAACAACCCCTTCGTCTTCTCCTTCATTCCCACTCACGAATAT
GGGTCGCCCAATGACTTCCACAGTCGCCACCAAAACGAGGAACCTCACTT
ATGCGGATGGAGTTGCATATGGAGAAGCCCTCTTACGCCGTAATATTAGC
CTCGAGCAGGAAATCCCTCCGTCATACGCGGAACGCAAACCAGACTACGA
GTTACCCTCTACGTTGACAGCACCCACAGAAGTCAAATATTCTCTTGAAC
ATGCACACTTGAATAGGAATCGTGCTGTCGGTCTGGCTGCTTTTAGCTTA
TCTATGCCATTCTTTGTCACTGAATGGCTCATTCATATGTCGGAGTTGAA
CTATCACGTATCAATGCATTTCAAAACCGAGCCTCTTGAAACGCGACAGA
CAGTGCTACGACCTCTCAGTATACCAGACCCGGACATCATCATTGGCTAT
AAGTGGAATTCGATACGTGGAAATTATAGACTTGCTTTCAACATCTTGCC
AGACAGTCTCAAGTTCGCGTTCCCAATAGCCGGGGATGCAAATTTTGCTC
TTCCCTTCTTTTCCATCGAGATGAGAATCGACACAGAGCAAGGCCCTCGC
CGGAACCTCCACATGGCCGCCTTAATGCTCAGAGCTCTGCGAAACCTCTA
CCAAAAGGCCTGCGGAAAAAACGACGAAGCCGACAAGTTCGACGGGAAGG
TACGAGTACTTACGGCTACGATCAATCGCATCGAAGTGAACGTTTTCGGA
CACTGGACGAGCAGCCGCCCAGGAGATCCGAACGTTACTTACGAGCACTT
TCTTATTAAAAGGTGGCGCTTACAAGAAATGGAAGAGTTATATGCGGCAC
GACATGGTTTAGAGACGCTCTGCAAGTGGATGATGAACGAAAACCGCAAG
TGGATTGTTTCTGGCTTACAAGAATTGGAGAAGACTTGATGTGATATTTC
CATCGTTACGCTGCGCACTTAGATTAGTTTTCCTTCTTCTCTCTCTCCGC
CTGTTTCATAGTTAGATGAAGGTTATCAACATTAGCTGATCATTAGCTGG
GAGATGCCCGTATAGCATGTTTAGAAAGTAGGACTACC back to topCoding sequence (CDS) from alignment at ch7:957681..959268- >KJC3_009630-T1 ID=KJC3_009630-T1|Name=KJC3_009630-T1|organism=Aspergillus niger KJC3|type=CDS|length=2142bp|location=Sequence derived from alignment at ch7:957681..959268- (Aspergillus niger KJC3)
ACCCACGCCCCCTCTCCACCAGCTGGATTCTAGTCATATTCCAGAGAGTT
ATCACAAACAACGCATCTTAAACTATATCAATAATATCAATCCCGCTCAC
TGGCCTGAAATTGACATAACAACCCCTTCGTCTTCTCCTTCATTCCCACT
CACGAATATGGGTCGCCCAATGACTTCCACAGTCGCCACCAAAACGAGGA
ACCTCACTTATGCGGATGGAGTTGCATATGGAGAAGCCCTCTTACGCCGT
AATATTAGCCTCGAGCAGGAAATCCCTCCGTCATACGCGGAACGCAAACC
AGACTACGAGTTACCCTCTACGTTGACAGCACCCACAGAAGTCAAATATT
CTCTTGAACATGCACACTTGAATAGGAATCGTGCTGTCGGTCTGGCTGCT
TTTAGCTTATCTATGCCATTCTTTGTCACTGAATGGCTCATTCATATGTC
GGAGTTGAACTATCACGTATCAATGCATTTCAAAACCGAGCCTCTTGAAA
CGCGACAGACAGTGCTACGACCTCTCAGTATACCAGACCCGGACATCATC
ATTGGCTATAAGTGGAATTCGATACGTGGAAATTATAGACTTGCTTTCAA
CATCTTGCCAGACAGTCTCAAGTTCGCGTTCCCAATAGCCGGGGATGCAA
ATTTTGCTCTTCCCTTCTTTTCCATCGAGATGAGAATCGACACAGAGCAA
GGCCCTCGCCGGAACCTCCACATGGCCGCCTTAATGCTCAGAGCTCTGCG
AAACCTCTACCAAAAGGCCTGCGGAAAAAACGACGAAGCCGACAAGTTCG
ACGGGAAGGTACGAGTACTTACGGCTACGATCAATCGCATCGAAGTGAAC
GTTTTCGGACACTGGACGAGCAGCCGCCCAGGAGATCCGAACGTTACTTA
CGAGCACTTTCTTATTAAAAGGTGGCGCTTACAAGAAATGGAAGAGTTAT
ATGCGGCACGACATGGTTTAGAGACGCTCTGCAAGTGGATGATGAACGAA
AACCGCAAGTGGATTGTTTCTGGCTTACAAGAATTGGAGAAGACTTGAAT
GGCTTCTCCAAGTGGCGAAAGACCCACGCCCCCTCTCCACCAGCTGGATT
CTAGTCATATTCCAGAGAGTTATCACAAACAACGCATCTTAAACTATATC
AATAATATCAATCCCGCTCACTGGCCTGAAATTGACATAACAACCCCTTC
GTCTTCTCCTTCATTCCCACTCACGAATATGGGTCGCCCAATGACTTCCA
CAGTCGCCACCAAAACGAGGAACCTCACTTATGCGGATGGAGTTGCATAT
GGAGAAGCCCTCTTACGCCGTAATATTAGCCTCGAGCAGGAAATCCCTCC
GTCATACGCGGAACGCAAACCAGACTACGAGTTACCCTCTACGTTGACAG
CACCCACAGAAGTCAAATATTCTCTTGAACATGCACACTTGAATAGGAAT
CGTGCTGTCGGTCTGGCTGCTTTTAGCTTATCTATGCCATTCTTTGTCAC
TGAATGGCTCATTCATATGTCGGAGTTGAACTATCACGTATCAATGCATT
TCAAAACCGAGCCTCTTGAAACGCGACAGACAGTGCTACGACCTCTCAGT
ATACCAGACCCGGACATCATCATTGGCTATAAGTGGAATTCGATACGTGG
AAATTATAGACTTGCTTTCAACATCTTGCCAGACAGTCTCAAGTTCGCGT
TCCCAATAGCCGGGGATGCAAATTTTGCTCTTCCCTTCTTTTCCATCGAG
ATGAGAATCGACACAGAGCAAGGCCCTCGCCGGAACCTCCACATGGCCGC
CTTAATGCTCAGAGCTCTGCGAAACCTCTACCAAAAGGCCTGCGGAAAAA
ACGACGAAGCCGACAAGTTCGACGGGAAGGTACGAGTACTTACGGCTACG
ATCAATCGCATCGAAGTGAACGTTTTCGGACACTGGACGAGCAGCCGCCC
AGGAGATCCGAACGTTACTTACGAGCACTTTCTTATTAAAAGGTGGCGCT
TACAAGAAATGGAAGAGTTATATGCGGCACGACATGGTTTAGAGACGCTC
TGCAAGTGGATGATGAACGAAAACCGCAAGTGGATTGTTTCTGGCTTACA
AGAATTGGAGAAGACTTGAATGGCTTCTCCAAGTGGCGAAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009630-T1.utr3p1 | KJC3_009630-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009630-T1.utr5p1 | KJC3_009630-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:957681..959268 - |
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