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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1053076..1055596+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009663-T1 ID=KJC3_009663-T1|Name=KJC3_009663-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2521bp|location=Sequence derived from alignment at ch7:1053076..1055596+ (Aspergillus niger KJC3) GACGTTGACTCTTTCTGTGCGCCCAGATGCAATTGATCCTCCACTGCAGC
AAGGGATCCTCGTTCCACGCTCTATCTGCCCTATCTACTACCCCATTCCA
CGTATCCTTTCGGCTCTTGAAGCTTCTCCGCCCCTCCTTTTTCTGATCGA
CGGGCCGAAAACGGGTCGGACTCCACAGCCAACCAGACATCGTCATAGCT
TGTCCCTCGCGAATACCACCTCGCATATCTACTGCTACATACATACCATA
CTATATATATCTGGACGCTCGGCGGACCAGAATCACGGGGTAGAGGGATT
GTCCGAGGTAACCCACTTGAAAAAAAAGCAAGTCCCTGTCTCTAGCCATG
CCTGACATCTCATTGCACACAGTAGAGAAATGTCTCTCAATCGCATCTCC
TTCTTGGAGTCTTGGGAACAGAACCCTGCCGCATTCCGCCGTCAACCGAG
ACCAGAGGACTCTGAAGATGAAGATAGATATCATGACCTTCCGGAGCCTT
CACTGTCATCATCCTTTCAATCAAACATTAGTAGTCGTCCAACCTTCCGA
GATCGCCTGAACTTTAATCCCTATGCTGGACCCGGTTGGAACGAGACCTT
CGTGGATGAGTTCGATAGACCCTATAGAGGTTCCTCGCCCAGGCGCCCTC
GGGCTGATGAAGCCGAACCTTTAGAACAACCCGAAGAAGATGACACATTG
AGGCCACAGCAACCTGTGGGCTTAGAAACTACGGGAGCCTTTGAGGTTGG
CCGTTCGAAACGAATCTGTAAGTTGTATGTCTCAGTGGTGAGCAATACGG
ACTCTGAACTTTTCCAAAGTGCAGGTTTGTATCGCAGTTGTATACTGCTT
GTTCTCTGCAGGAATAGTCTTCGGATTTGCGGCAATCAAGCCCATATTCG
TCAAAGAAGGAGTCTACCGCAACCTGTGCTCAAAGGACGAGCTCGATAGC
GGCTCAGATGTATGCTATCGACAAGACATCCGGTGCGTCGGCTCAAATAC
GGATCTTTAACAGCACGTATTTGCTAACCGACTGCTTCCAGGCTGAATCT
AATGTTTACGGTAGCCGCCGTTGCAACAAACGTGTCAGCATTGCCCGTAG
GAGCCATACTAGACACCCATGGCCCCCGAGTATGTGGCATCATTGGCAGT
ATCTGTTTAACCGTGGGCAGCCTTCTGCTCGGGCTCGCACCCAAGCTTTC
CTTTGATGCTTACTTACCAGGGTATCTCTTTCTATCCCTCGGGGGGCCTT
TCATCTTCGTCCCATCGTATCAACTGTCGAACACCTTCCCGACCCATTCT
GGTCTTATCCTGTCCACCCTTACGGGTGCTTTCGACGCTTCCAGCGCACT
CTTTCTCGTGTTTCGGCTGTTAAATGAGAAGACCGAGGGCGCCTTCACTA
CATCGCGGTTTTTCCTTATCTATCTCATTGTACCAATCTTCATCTTGACT
GCTCAGCTAACGGTCATGCCCAAAACCTCCTACAAGACGGCAGGGGAGCT
TGTTCAGCAGGCGGAAGAACAAATCGTAGCGGAGGCAGCTGACCGAGTAG
ATGAAGCTATTGGTGACCGTAATGAAGGAGAACGGCAACGCAATGACCGC
CGTCTTCAGCGGCAGACTGTTATCAATCAAATCGAGGACTTGCTACATGC
ACCTACGCCCGAGCAGGACCACCAACCACAACTAGAAGAAGAACAGACCG
AGTCTATCCCTCACACTGCTGGCGGTGTCTGGGGTGCCCTGCATGGCCGC
TCAGCCTTGCAGCAAATTCGCACCCCATGGTTCGTGCTTATCACTCTCTT
CACCGTCCTCCAAATGCTTCGAATCAACTACTTCGTCGCCACCATTCGTC
AACAATACACCTATCTTCTACACTCGCTCGAGCGTGCCAAAGCTTTGAAT
TCCACTTTTGACGTCTTACTCCCTCTCGGCGGCCTGATCTCCGTCCCCTT
CACCGGAGCCATCCTCGACAATGCTAGTACCCCAGTCGTGCTTGGTATCC
TCGTTATCACCGCTACGCTCATTGGCCTCCTTGGTTGCATCCCCAGCATC
CTCGCCGGCTATGCCAATATCATCCTCTTCGTCATCTATCGCCCCTTCTA
CTATACATCCGTCTCTGACTACGCTTCCAAAGTCTTCGGCTTCCAAACCT
TCGGCAAGGTATACGGCCTCATCATCTGTCTTGCAGGATTGGGAAACTTC
GCTCAGACAGGCCTCGACACCCTCGTCTTCCGAGTCTTCCATCGCAATCC
CATTCCCGTCAACGCGATGCTTACAGGTTTAACGTTCCCCGTTGGCCTAG
CTTTGGTCGCATACGTCTCATGGCAGACTAAGAAGCTAGCCGCCGCCAAG
TTAGCCCAAGAAAATGTCACCGATGGTGCCAATGCTGAGAGTGGACTCGT
GGCGGGCCACGACGACCAGGTGAATTCTCGGGACTGGTACGCGGATGAGA
GGACACCGCTGCTGGGTGATAGTATTCGGGGGCGTCGATCTTCCTTTGCA
GTTGGGGTTCCACCTTCTTGA back to topCoding sequence (CDS) from alignment at ch7:1053076..1055596+ >KJC3_009663-T1 ID=KJC3_009663-T1|Name=KJC3_009663-T1|organism=Aspergillus niger KJC3|type=CDS|length=6093bp|location=Sequence derived from alignment at ch7:1053076..1055596+ (Aspergillus niger KJC3) ATGTCTCTCAATCGCATCTCCTTCTTGGAGTCTTGGGAACAGAACCCTGC CGCATTCCGCCGTCAACCGAGACCAGAGGACTCTGAAGATGAAGATAGAT ATCATGACCTTCCGGAGCCTTCACTGTCATCATCCTTTCAATCAAACATT AGTAGTCGTCCAACCTTCCGAGATCGCCTGAACTTTAATCCCTATGCTGG ACCCGGTTGGAACGAGACCTTCGTGGATGAGTTCGATAGACCCTATAGAG GTTCCTCGCCCAGGCGCCCTCGGGCTGATGAAGCCGAACCTTTAGAACAA CCCGAAGAAGATGACACATTGAGGCCACAGCAACCTGTGGGCTTAGAAAC TACGGGAGCCTTTGAGGTTGGCCGTTCGAAACGAATCTTGCAGGTTTGTA TCGCAGTTGTATACTGCTTGTTCTCTGCAGGAATAGTCTTCGGATTTGCG GCAATCAAGCCCATATTCGTCAAAGAAGGAGTCTACCGCAACCTGTGCTC AAAGGACGAGCTCGATAGCGGCTCAGATGTATGCTATCGACAAGACATCC GGCTGAATCTAATGTTTACGGTAGCCGCCGTTGCAACAAACGTGTCAGCA TTGCCCGTAGGAGCCATACTAGACACCCATGGCCCCCGAGTATGTGGCAT CATTGGCAGTATCTGTTTAACCGTGGGCAGCCTTCTGCTCGGGCTCGCAC CCAAGCTTTCCTTTGATGCTTACTTACCAGGGTATCTCTTTCTATCCCTC GGGGGGCCTTTCATCTTCGTCCCATCGTATCAACTGTCGAACACCTTCCC GACCCATTCTGGTCTTATCCTGTCCACCCTTACGGGTGCTTTCGACGCTT CCAGCGCACTCTTTCTCGTGTTTCGGCTGTTAAATGAGAAGACCGAGGGC GCCTTCACTACATCGCGGTTTTTCCTTATCTATCTCATTGTACCAATCTT CATCTTGACTGCTCAGCTAACGGTCATGCCCAAAACCTCCTACAAGACGG CAGGGGAGCTTGTTCAGCAGGCGGAAGAACAAATCGTAGCGGAGGCAGCT GACCGAGTAGATGAAGCTATTGGTGACCGTAATGAAGGAGAACGGCAACG CAATGACCGCCGTCTTCAGCGGCAGACTGTTATCAATCAAATCGAGGACT TGCTACATGCACCTACGCCCGAGCAGGACCACCAACCACAACTAGAAGAA GAACAGACCGAGTCTATCCCTCACACTGCTGGCGGTGTCTGGGGTGCCCT GCATGGCCGCTCAGCCTTGCAGCAAATTCGCACCCCATGGTTCGTGCTTA TCACTCTCTTCACCGTCCTCCAAATGCTTCGAATCAACTACTTCGTCGCC ACCATTCGTCAACAATACACCTATCTTCTACACTCGCTCGAGCGTGCCAA AGCTTTGAATTCCACTTTTGACGTCTTACTCCCTCTCGGCGGCCTGATCT CCGTCCCCTTCACCGGAGCCATCCTCGACAATGCTAGTACCCCAGTCGTG CTTGGTATCCTCGTTATCACCGCTACGCTCATTGGCCTCCTTGGTTGCAT CCCCAGCATCCTCGCCGGCTATGCCAATATCATCCTCTTCGTCATCTATC GCCCCTTCTACTATACATCCGTCTCTGACTACGCTTCCAAAGTCTTCGGC TTCCAAACCTTCGGCAAGGTATACGGCCTCATCATCTGTCTTGCAGGATT GGGAAACTTCGCTCAGACAGGCCTCGACACCCTCGTCTTCCGAGTCTTCC ATCGCAATCCCATTCCCGTCAACGCGATGCTTACAGGTTTAACGTTCCCC GTTGGCCTAGCTTTGGTCGCATACGTCTCATGGCAGACTAAGAAGCTAGC CGCCGCCAAGTTAGCCCAAGAAAATGTCACCGATGGTGCCAATGCTGAGA GTGGACTCGTGGCGGGCCACGACGACCAGGTGAATTCTCGGGACTGGTAC GCGGATGAGAGGACACCGCTGCTGGGTGATAGTATTCGGGGGCGTCGATC TTCCTTTGCAGTTGGGGTTCCACCTTCTTGAATGTCTCTCAATCGCATCT CCTTCTTGGAGTCTTGGGAACAGAACCCTGCCGCATTCCGCCGTCAACCG AGACCAGAGGACTCTGAAGATGAAGATAGATATCATGACCTTCCGGAGCC TTCACTGTCATCATCCTTTCAATCAAACATTAGTAGTCGTCCAACCTTCC GAGATCGCCTGAACTTTAATCCCTATGCTGGACCCGGTTGGAACGAGACC TTCGTGGATGAGTTCGATAGACCCTATAGAGGTTCCTCGCCCAGGCGCCC TCGGGCTGATGAAGCCGAACCTTTAGAACAACCCGAAGAAGATGACACAT TGAGGCCACAGCAACCTGTGGGCTTAGAAACTACGGGAGCCTTTGAGGTT GGCCGTTCGAAACGAATCTTGCAGGTTTGTATCGCAGTTGTATACTGCTT GTTCTCTGCAGGAATAGTCTTCGGATTTGCGGCAATCAAGCCCATATTCG TCAAAGAAGGAGTCTACCGCAACCTGTGCTCAAAGGACGAGCTCGATAGC GGCTCAGATGTATGCTATCGACAAGACATCCGGCTGAATCTAATGTTTAC GGTAGCCGCCGTTGCAACAAACGTGTCAGCATTGCCCGTAGGAGCCATAC TAGACACCCATGGCCCCCGAGTATGTGGCATCATTGGCAGTATCTGTTTA ACCGTGGGCAGCCTTCTGCTCGGGCTCGCACCCAAGCTTTCCTTTGATGC TTACTTACCAGGGTATCTCTTTCTATCCCTCGGGGGGCCTTTCATCTTCG TCCCATCGTATCAACTGTCGAACACCTTCCCGACCCATTCTGGTCTTATC CTGTCCACCCTTACGGGTGCTTTCGACGCTTCCAGCGCACTCTTTCTCGT GTTTCGGCTGTTAAATGAGAAGACCGAGGGCGCCTTCACTACATCGCGGT TTTTCCTTATCTATCTCATTGTACCAATCTTCATCTTGACTGCTCAGCTA ACGGTCATGCCCAAAACCTCCTACAAGACGGCAGGGGAGCTTGTTCAGCA GGCGGAAGAACAAATCGTAGCGGAGGCAGCTGACCGAGTAGATGAAGCTA TTGGTGACCGTAATGAAGGAGAACGGCAACGCAATGACCGCCGTCTTCAG CGGCAGACTGTTATCAATCAAATCGAGGACTTGCTACATGCACCTACGCC CGAGCAGGACCACCAACCACAACTAGAAGAAGAACAGACCGAGTCTATCC CTCACACTGCTGGCGGTGTCTGGGGTGCCCTGCATGGCCGCTCAGCCTTG CAGCAAATTCGCACCCCATGGTTCGTGCTTATCACTCTCTTCACCGTCCT CCAAATGCTTCGAATCAACTACTTCGTCGCCACCATTCGTCAACAATACA CCTATCTTCTACACTCGCTCGAGCGTGCCAAAGCTTTGAATTCCACTTTT GACGTCTTACTCCCTCTCGGCGGCCTGATCTCCGTCCCCTTCACCGGAGC CATCCTCGACAATGCTAGTACCCCAGTCGTGCTTGGTATCCTCGTTATCA CCGCTACGCTCATTGGCCTCCTTGGTTGCATCCCCAGCATCCTCGCCGGC TATGCCAATATCATCCTCTTCGTCATCTATCGCCCCTTCTACTATACATC CGTCTCTGACTACGCTTCCAAAGTCTTCGGCTTCCAAACCTTCGGCAAGG TATACGGCCTCATCATCTGTCTTGCAGGATTGGGAAACTTCGCTCAGACA GGCCTCGACACCCTCGTCTTCCGAGTCTTCCATCGCAATCCCATTCCCGT CAACGCGATGCTTACAGGTTTAACGTTCCCCGTTGGCCTAGCTTTGGTCG CATACGTCTCATGGCAGACTAAGAAGCTAGCCGCCGCCAAGTTAGCCCAA GAAAATGTCACCGATGGTGCCAATGCTGAGAGTGGACTCGTGGCGGGCCA CGACGACCAGGTGAATTCTCGGGACTGGTACGCGGATGAGAGGACACCGC TGCTGGGTGATAGTATTCGGGGGCGTCGATCTTCCTTTGCAGTTGGGGTT CCACCTTCTTGAATGTCTCTCAATCGCATCTCCTTCTTGGAGTCTTGGGA ACAGAACCCTGCCGCATTCCGCCGTCAACCGAGACCAGAGGACTCTGAAG ATGAAGATAGATATCATGACCTTCCGGAGCCTTCACTGTCATCATCCTTT CAATCAAACATTAGTAGTCGTCCAACCTTCCGAGATCGCCTGAACTTTAA TCCCTATGCTGGACCCGGTTGGAACGAGACCTTCGTGGATGAGTTCGATA GACCCTATAGAGGTTCCTCGCCCAGGCGCCCTCGGGCTGATGAAGCCGAA CCTTTAGAACAACCCGAAGAAGATGACACATTGAGGCCACAGCAACCTGT GGGCTTAGAAACTACGGGAGCCTTTGAGGTTGGCCGTTCGAAACGAATCT TGCAGGTTTGTATCGCAGTTGTATACTGCTTGTTCTCTGCAGGAATAGTC TTCGGATTTGCGGCAATCAAGCCCATATTCGTCAAAGAAGGAGTCTACCG CAACCTGTGCTCAAAGGACGAGCTCGATAGCGGCTCAGATGTATGCTATC GACAAGACATCCGGCTGAATCTAATGTTTACGGTAGCCGCCGTTGCAACA AACGTGTCAGCATTGCCCGTAGGAGCCATACTAGACACCCATGGCCCCCG AGTATGTGGCATCATTGGCAGTATCTGTTTAACCGTGGGCAGCCTTCTGC TCGGGCTCGCACCCAAGCTTTCCTTTGATGCTTACTTACCAGGGTATCTC TTTCTATCCCTCGGGGGGCCTTTCATCTTCGTCCCATCGTATCAACTGTC GAACACCTTCCCGACCCATTCTGGTCTTATCCTGTCCACCCTTACGGGTG CTTTCGACGCTTCCAGCGCACTCTTTCTCGTGTTTCGGCTGTTAAATGAG AAGACCGAGGGCGCCTTCACTACATCGCGGTTTTTCCTTATCTATCTCAT TGTACCAATCTTCATCTTGACTGCTCAGCTAACGGTCATGCCCAAAACCT CCTACAAGACGGCAGGGGAGCTTGTTCAGCAGGCGGAAGAACAAATCGTA GCGGAGGCAGCTGACCGAGTAGATGAAGCTATTGGTGACCGTAATGAAGG AGAACGGCAACGCAATGACCGCCGTCTTCAGCGGCAGACTGTTATCAATC AAATCGAGGACTTGCTACATGCACCTACGCCCGAGCAGGACCACCAACCA CAACTAGAAGAAGAACAGACCGAGTCTATCCCTCACACTGCTGGCGGTGT CTGGGGTGCCCTGCATGGCCGCTCAGCCTTGCAGCAAATTCGCACCCCAT GGTTCGTGCTTATCACTCTCTTCACCGTCCTCCAAATGCTTCGAATCAAC TACTTCGTCGCCACCATTCGTCAACAATACACCTATCTTCTACACTCGCT CGAGCGTGCCAAAGCTTTGAATTCCACTTTTGACGTCTTACTCCCTCTCG GCGGCCTGATCTCCGTCCCCTTCACCGGAGCCATCCTCGACAATGCTAGT ACCCCAGTCGTGCTTGGTATCCTCGTTATCACCGCTACGCTCATTGGCCT CCTTGGTTGCATCCCCAGCATCCTCGCCGGCTATGCCAATATCATCCTCT TCGTCATCTATCGCCCCTTCTACTATACATCCGTCTCTGACTACGCTTCC AAAGTCTTCGGCTTCCAAACCTTCGGCAAGGTATACGGCCTCATCATCTG TCTTGCAGGATTGGGAAACTTCGCTCAGACAGGCCTCGACACCCTCGTCT TCCGAGTCTTCCATCGCAATCCCATTCCCGTCAACGCGATGCTTACAGGT TTAACGTTCCCCGTTGGCCTAGCTTTGGTCGCATACGTCTCATGGCAGAC TAAGAAGCTAGCCGCCGCCAAGTTAGCCCAAGAAAATGTCACCGATGGTG CCAATGCTGAGAGTGGACTCGTGGCGGGCCACGACGACCAGGTGAATTCT CGGGACTGGTACGCGGATGAGAGGACACCGCTGCTGGGTGATAGTATTCG GGGGCGTCGATCTTCCTTTGCAGTTGGGGTTCCACCTTCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR011701 |
DBxref | PFAM:PF07690 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:1053076..1055596 + |
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