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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1060148..1062679- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009665-T1 ID=KJC3_009665-T1|Name=KJC3_009665-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2532bp|location=Sequence derived from alignment at ch7:1060148..1062679- (Aspergillus niger KJC3)
ACTCAGGAAGGTCTTGCAGAGGATAGTCACTGTCAGTGAGCTGTACCACA
TCCAAATTAGCAGCATGGATAACGGACAGGTGCTAGATATATCTGGACAT
GGCTGCCATAGCTTATCGTGATGGGTTCGAAGCTCGAACAGCTCAGCGGA
CGCAGCACCGGAAGCGAACAAGTCAGCTTAGACACAGAGCGCTTATCAGC
GGGTCTGGCTTATCGGGCTTCTCCGCACGTGTGGTGCTTCCCCCGCAATA
AAAGGAAGGCGCCCCCCCTGCGTTGTGACGGATCTCTTTTTCTGCGCGGA
AAGTTGCTCTTCTCCTCTCTATCTTTCTCTGTCCTTCCCCTTGGGCTTCT
GCACAGGCTCCTAAGGAGGTGACATACAATGCTTCCCCCCTTTGATTACT
TTACGTATCGTCGCATCCGGTAGGTTACCCCGTGTGCCTTCACGCAGCAA
CTTAAGCAGTCCTACATAGCCCACATGCAACTTAGCCGACGGCTCACTGA
CCATTCACAGGGACCTCAAGAGGAGGGAACGGGCGGCTCGATTTGCATCG
CTATCTCCCGATTATCATGCGCCCTTCTCGGCTATCGACAGGGTTATCAT
TAACAAGCCTATCCAGGACTTGGTATATGAGGTCCAGAATGATTCCTTGG
CACCTTTAGATGTCCTACGCACATACGGCAAGGTTGCAGTCAAGGCTCAC
GAAAAGACCAATTGCGTGACTGAGCTTCTATTGCCTGAGGCAGAATCATG
GGCTCAGTCCGAAGTAAACCTAAAAGGTCCCCTGGCGGGTGTGCCTATCT
CTTTGAAAGACTCGGTGCAAGTCAAAGGATTCGATATTACTCTGGGGTAT
ACCAAGTTCGCGTGTAAACCGTATAAGGAGGATGGTCCAATGGCAAAGCT
GTTGAAGGATGCTGGTAGGTGACCTGTGCCGCGAAACATCACAGAAAGTA
TCCCTGCGCTAATGATGAACTCCATCAGGTGCGGTCCCATATGCGAAAAC
GGCGCTGCCCGTGACGCTTCTGTCGTTCGAATCAGCAAACGCTCTTTGGG
GTCACTGCCTTAACCCACATGTCCCGGAATACTCTCCTGGCGGCTCGACG
GGTGGTGAAGGTGCTCTGCTGGCTCTTGGTGGTCGCATCGGTATCGGGTC
GGATGTCGCTGGCTCGGTTCGCGTTCCCGCTGCCTGGAGCGGCATCTACT
CCCTCCGCTGTAGTACTGGCCGCTGGCCTAAGGTCGGAGTCAACACCAGC
ATGGCTGGCCAGGAAGGTGTTGCCAGTGTCTTCAGTCCTATGGCCCGTAC
TTTGAACGATCTCACCTATTTCACCAAAGCTATTGTCGGAATGAAGCCTT
GGAACTACGACCATACCGTCCACCCTATCTCCTGGAGAGAAGATGAGGAA
ATTGAAGCCCAAAACAAAAGGTTGAGGATCGGCCTCATGAGCAACGATGG
TAAGTTCCAAGAGCGGGGACATCAAGGACACTACTTGGGCCTTTCTGACC
ACTTGCAGGTGTCGTTCCCCCAACGCCGGCCATTGAACGTGCTATTTCCA
CCACAGTAGCCGCCCTCACCGCCGCTGGGCATACTGTATCTGAGATCACA
CCCCCCGCTGCGGCTGACACTTTTACTGGTCTCTCCCTCGCCTCGCAGCT
GCTCAACTCTGATGGGTGCGTCACGTTTAACTCGCATCTGCACAGCTTTG
AGCCATCCGACCCTGGTGCAGATCAGCTGACGCGGATATGCAATCTGCCC
CGTCCTCTACGTTATCTCTACTACCTTTGGGTTCGGTACATCCGACGGGA
TGAGAAGTGGGCGACGCTGATCCGCGGGTTTGCCCCCAAGTCTGCGGCGG
AGCTTTGGAAGCTCACTGCCCAGCGGGAAGCTTTCCGGGCGACCTGGCAC
AGCTGGTGGGATGCCGAGACGCAGCAGTACGATTTCATCCTCTGCCCCGT
CAATGCGACGCCGGCTCTGCCCCACAAAGCCATGCACGATGCGGTATCCT
CATGCGGATACACGTTCCTCTGGAACCTGCTGGACTACACAGCCGGTGTC
GTGCCTGTCTCGCACGTGGACGCGAAGAAGGATGCTCTGTCTGGTCCGTA
CAAGAAGGTGCTGAAACAGCTGGGAGCCAGCAACGCGGTGGCCTACGGTG
CCTGGAAGCACTACGACGCGGCGAAGATGGCGGGATTGCCTACTGCAGTG
CAGGTGGTGGGACGCAGATGGCAGGAAGAGAAGGTGCTTGGATACATGGC
GGCAGTTGAGGAGGCCTTGGAGCAGTATCAGGACCCGGTAACTGGAGAAG
GGGGGAAATACCCATTGATTGAGCTTGACTAGTTTACTTACCCGGAAGTT
TGTTTCGCAAATGGGGATAATGGACGAAGTATATTACGTCTGTTATTAAG
GCTATAACCGTCGGTAGGGTAGACAATACAATCATTATCTGCATCGAGAA
TCCGAGTTGAGCCATGGACACCCCCAGGTCACCCTGAGGGAACCAGGGGA
TGGGTCTGGAGAGAGAGCAGCGGCCGATTACA back to topCoding sequence (CDS) from alignment at ch7:1060148..1062679- >KJC3_009665-T1 ID=KJC3_009665-T1|Name=KJC3_009665-T1|organism=Aspergillus niger KJC3|type=CDS|length=6960bp|location=Sequence derived from alignment at ch7:1060148..1062679- (Aspergillus niger KJC3)
GTGTCGTTCCCCCAACGCCGGCCATTGAACGTGCTATTTCCACCACAGTA
GCCGCCCTCACCGCCGCTGGGCATACTGTATCTGAGATCACACCCCCCGC
TGCGGCTGACACTTTTACTGGTCTCTCCCTCGCCTCGCAGCTGCTCAACT
CTGATGGGTGCGTCACGTTTAACTCGCATCTGCACAGCTTTGAGCCATCC
GACCCTGGTGCAGATCAGCTGACGCGGATATGCAATCTGCCCCGTCCTCT
ACGTTATCTCTACTACCTTTGGGTTCGGTACATCCGACGGGATGAGAAGT
GGGCGACGCTGATCCGCGGGTTTGCCCCCAAGTCTGCGGCGGAGCTTTGG
AAGCTCACTGCCCAGCGGGAAGCTTTCCGGGCGACCTGGCACAGCTGGTG
GGATGCCGAGACGCAGCAGTACGATTTCATCCTCTGCCCCGTCAATGCGA
CGCCGGCTCTGCCCCACAAAGCCATGCACGATGCGGTATCCTCATGCGGA
TACACGTTCCTCTGGAACCTGCTGGACTACACAGCCGGTGTCGTGCCTGT
CTCGCACGTGGACGCGAAGAAGGATGCTCTGTCTGGTCCGTACAAGAAGG
TGCTGAAACAGCTGGGAGCCAGCAACGCGGTGGCCTACGGTGCCTGGAAG
CACTACGACGCGGCGAAGATGGCGGGATTGCCTACTGCAGTGCAGGTGGT
GGGACGCAGATGGCAGGAAGAGAAGGTGCTTGGATACATGGCGGCAGTTG
AGGAGGCCTTGGAGCAGTATCAGGACCCGGTAACTGGAGAAGGGGGGAAA
TACCCATTGATTGAGCTTGACTAGGTGCGGTCCCATATGCGAAAACGGCG
CTGCCCGTGACGCTTCTGTCGTTCGAATCAGCAAACGCTCTTTGGGGTCA
CTGCCTTAACCCACATGTCCCGGAATACTCTCCTGGCGGCTCGACGGGTG
GTGAAGGTGCTCTGCTGGCTCTTGGTGGTCGCATCGGTATCGGGTCGGAT
GTCGCTGGCTCGGTTCGCGTTCCCGCTGCCTGGAGCGGCATCTACTCCCT
CCGCTGTAGTACTGGCCGCTGGCCTAAGGTCGGAGTCAACACCAGCATGG
CTGGCCAGGAAGGTGTTGCCAGTGTCTTCAGTCCTATGGCCCGTACTTTG
AACGATCTCACCTATTTCACCAAAGCTATTGTCGGAATGAAGCCTTGGAA
CTACGACCATACCGTCCACCCTATCTCCTGGAGAGAAGATGAGGAAATTG
AAGCCCAAAACAAAAGGTTGAGGATCGGCCTCATGAGCAACGATGGGACC
TCAAGAGGAGGGAACGGGCGGCTCGATTTGCATCGCTATCTCCCGATTAT
CATGCGCCCTTCTCGGCTATCGACAGGGTTATCATTAACAAGCCTATCCA
GGACTTGGTATATGAGGTCCAGAATGATTCCTTGGCACCTTTAGATGTCC
TACGCACATACGGCAAGGTTGCAGTCAAGGCTCACGAAAAGACCAATTGC
GTGACTGAGCTTCTATTGCCTGAGGCAGAATCATGGGCTCAGTCCGAAGT
AAACCTAAAAGGTCCCCTGGCGGGTGTGCCTATCTCTTTGAAAGACTCGG
TGCAAGTCAAAGGATTCGATATTACTCTGGGGTATACCAAGTTCGCGTGT
AAACCGTATAAGGAGGATGGTCCAATGGCAAAGCTGTTGAAGGATGCTGA
TGCTTCCCCCCTTTGATTACTTTACGTATCGTCGCATCCGGTGTCGTTCC
CCCAACGCCGGCCATTGAACGTGCTATTTCCACCACAGTAGCCGCCCTCA
CCGCCGCTGGGCATACTGTATCTGAGATCACACCCCCCGCTGCGGCTGAC
ACTTTTACTGGTCTCTCCCTCGCCTCGCAGCTGCTCAACTCTGATGGGTG
CGTCACGTTTAACTCGCATCTGCACAGCTTTGAGCCATCCGACCCTGGTG
CAGATCAGCTGACGCGGATATGCAATCTGCCCCGTCCTCTACGTTATCTC
TACTACCTTTGGGTTCGGTACATCCGACGGGATGAGAAGTGGGCGACGCT
GATCCGCGGGTTTGCCCCCAAGTCTGCGGCGGAGCTTTGGAAGCTCACTG
CCCAGCGGGAAGCTTTCCGGGCGACCTGGCACAGCTGGTGGGATGCCGAG
ACGCAGCAGTACGATTTCATCCTCTGCCCCGTCAATGCGACGCCGGCTCT
GCCCCACAAAGCCATGCACGATGCGGTATCCTCATGCGGATACACGTTCC
TCTGGAACCTGCTGGACTACACAGCCGGTGTCGTGCCTGTCTCGCACGTG
GACGCGAAGAAGGATGCTCTGTCTGGTCCGTACAAGAAGGTGCTGAAACA
GCTGGGAGCCAGCAACGCGGTGGCCTACGGTGCCTGGAAGCACTACGACG
CGGCGAAGATGGCGGGATTGCCTACTGCAGTGCAGGTGGTGGGACGCAGA
TGGCAGGAAGAGAAGGTGCTTGGATACATGGCGGCAGTTGAGGAGGCCTT
GGAGCAGTATCAGGACCCGGTAACTGGAGAAGGGGGGAAATACCCATTGA
TTGAGCTTGACTAGGTGCGGTCCCATATGCGAAAACGGCGCTGCCCGTGA
CGCTTCTGTCGTTCGAATCAGCAAACGCTCTTTGGGGTCACTGCCTTAAC
CCACATGTCCCGGAATACTCTCCTGGCGGCTCGACGGGTGGTGAAGGTGC
TCTGCTGGCTCTTGGTGGTCGCATCGGTATCGGGTCGGATGTCGCTGGCT
CGGTTCGCGTTCCCGCTGCCTGGAGCGGCATCTACTCCCTCCGCTGTAGT
ACTGGCCGCTGGCCTAAGGTCGGAGTCAACACCAGCATGGCTGGCCAGGA
AGGTGTTGCCAGTGTCTTCAGTCCTATGGCCCGTACTTTGAACGATCTCA
CCTATTTCACCAAAGCTATTGTCGGAATGAAGCCTTGGAACTACGACCAT
ACCGTCCACCCTATCTCCTGGAGAGAAGATGAGGAAATTGAAGCCCAAAA
CAAAAGGTTGAGGATCGGCCTCATGAGCAACGATGGGACCTCAAGAGGAG
GGAACGGGCGGCTCGATTTGCATCGCTATCTCCCGATTATCATGCGCCCT
TCTCGGCTATCGACAGGGTTATCATTAACAAGCCTATCCAGGACTTGGTA
TATGAGGTCCAGAATGATTCCTTGGCACCTTTAGATGTCCTACGCACATA
CGGCAAGGTTGCAGTCAAGGCTCACGAAAAGACCAATTGCGTGACTGAGC
TTCTATTGCCTGAGGCAGAATCATGGGCTCAGTCCGAAGTAAACCTAAAA
GGTCCCCTGGCGGGTGTGCCTATCTCTTTGAAAGACTCGGTGCAAGTCAA
AGGATTCGATATTACTCTGGGGTATACCAAGTTCGCGTGTAAACCGTATA
AGGAGGATGGTCCAATGGCAAAGCTGTTGAAGGATGCTGATGCTTCCCCC
CTTTGATTACTTTACGTATCGTCGCATCCGGTGTCGTTCCCCCAACGCCG
GCCATTGAACGTGCTATTTCCACCACAGTAGCCGCCCTCACCGCCGCTGG
GCATACTGTATCTGAGATCACACCCCCCGCTGCGGCTGACACTTTTACTG
GTCTCTCCCTCGCCTCGCAGCTGCTCAACTCTGATGGGTGCGTCACGTTT
AACTCGCATCTGCACAGCTTTGAGCCATCCGACCCTGGTGCAGATCAGCT
GACGCGGATATGCAATCTGCCCCGTCCTCTACGTTATCTCTACTACCTTT
GGGTTCGGTACATCCGACGGGATGAGAAGTGGGCGACGCTGATCCGCGGG
TTTGCCCCCAAGTCTGCGGCGGAGCTTTGGAAGCTCACTGCCCAGCGGGA
AGCTTTCCGGGCGACCTGGCACAGCTGGTGGGATGCCGAGACGCAGCAGT
ACGATTTCATCCTCTGCCCCGTCAATGCGACGCCGGCTCTGCCCCACAAA
GCCATGCACGATGCGGTATCCTCATGCGGATACACGTTCCTCTGGAACCT
GCTGGACTACACAGCCGGTGTCGTGCCTGTCTCGCACGTGGACGCGAAGA
AGGATGCTCTGTCTGGTCCGTACAAGAAGGTGCTGAAACAGCTGGGAGCC
AGCAACGCGGTGGCCTACGGTGCCTGGAAGCACTACGACGCGGCGAAGAT
GGCGGGATTGCCTACTGCAGTGCAGGTGGTGGGACGCAGATGGCAGGAAG
AGAAGGTGCTTGGATACATGGCGGCAGTTGAGGAGGCCTTGGAGCAGTAT
CAGGACCCGGTAACTGGAGAAGGGGGGAAATACCCATTGATTGAGCTTGA
CTAGGTGCGGTCCCATATGCGAAAACGGCGCTGCCCGTGACGCTTCTGTC
GTTCGAATCAGCAAACGCTCTTTGGGGTCACTGCCTTAACCCACATGTCC
CGGAATACTCTCCTGGCGGCTCGACGGGTGGTGAAGGTGCTCTGCTGGCT
CTTGGTGGTCGCATCGGTATCGGGTCGGATGTCGCTGGCTCGGTTCGCGT
TCCCGCTGCCTGGAGCGGCATCTACTCCCTCCGCTGTAGTACTGGCCGCT
GGCCTAAGGTCGGAGTCAACACCAGCATGGCTGGCCAGGAAGGTGTTGCC
AGTGTCTTCAGTCCTATGGCCCGTACTTTGAACGATCTCACCTATTTCAC
CAAAGCTATTGTCGGAATGAAGCCTTGGAACTACGACCATACCGTCCACC
CTATCTCCTGGAGAGAAGATGAGGAAATTGAAGCCCAAAACAAAAGGTTG
AGGATCGGCCTCATGAGCAACGATGGGACCTCAAGAGGAGGGAACGGGCG
GCTCGATTTGCATCGCTATCTCCCGATTATCATGCGCCCTTCTCGGCTAT
CGACAGGGTTATCATTAACAAGCCTATCCAGGACTTGGTATATGAGGTCC
AGAATGATTCCTTGGCACCTTTAGATGTCCTACGCACATACGGCAAGGTT
GCAGTCAAGGCTCACGAAAAGACCAATTGCGTGACTGAGCTTCTATTGCC
TGAGGCAGAATCATGGGCTCAGTCCGAAGTAAACCTAAAAGGTCCCCTGG
CGGGTGTGCCTATCTCTTTGAAAGACTCGGTGCAAGTCAAAGGATTCGAT
ATTACTCTGGGGTATACCAAGTTCGCGTGTAAACCGTATAAGGAGGATGG
TCCAATGGCAAAGCTGTTGAAGGATGCTGATGCTTCCCCCCTTTGATTAC
TTTACGTATCGTCGCATCCGGTGTCGTTCCCCCAACGCCGGCCATTGAAC
GTGCTATTTCCACCACAGTAGCCGCCCTCACCGCCGCTGGGCATACTGTA
TCTGAGATCACACCCCCCGCTGCGGCTGACACTTTTACTGGTCTCTCCCT
CGCCTCGCAGCTGCTCAACTCTGATGGGTGCGTCACGTTTAACTCGCATC
TGCACAGCTTTGAGCCATCCGACCCTGGTGCAGATCAGCTGACGCGGATA
TGCAATCTGCCCCGTCCTCTACGTTATCTCTACTACCTTTGGGTTCGGTA
CATCCGACGGGATGAGAAGTGGGCGACGCTGATCCGCGGGTTTGCCCCCA
AGTCTGCGGCGGAGCTTTGGAAGCTCACTGCCCAGCGGGAAGCTTTCCGG
GCGACCTGGCACAGCTGGTGGGATGCCGAGACGCAGCAGTACGATTTCAT
CCTCTGCCCCGTCAATGCGACGCCGGCTCTGCCCCACAAAGCCATGCACG
ATGCGGTATCCTCATGCGGATACACGTTCCTCTGGAACCTGCTGGACTAC
ACAGCCGGTGTCGTGCCTGTCTCGCACGTGGACGCGAAGAAGGATGCTCT
GTCTGGTCCGTACAAGAAGGTGCTGAAACAGCTGGGAGCCAGCAACGCGG
TGGCCTACGGTGCCTGGAAGCACTACGACGCGGCGAAGATGGCGGGATTG
CCTACTGCAGTGCAGGTGGTGGGACGCAGATGGCAGGAAGAGAAGGTGCT
TGGATACATGGCGGCAGTTGAGGAGGCCTTGGAGCAGTATCAGGACCCGG
TAACTGGAGAAGGGGGGAAATACCCATTGATTGAGCTTGACTAGGTGCGG
TCCCATATGCGAAAACGGCGCTGCCCGTGACGCTTCTGTCGTTCGAATCA
GCAAACGCTCTTTGGGGTCACTGCCTTAACCCACATGTCCCGGAATACTC
TCCTGGCGGCTCGACGGGTGGTGAAGGTGCTCTGCTGGCTCTTGGTGGTC
GCATCGGTATCGGGTCGGATGTCGCTGGCTCGGTTCGCGTTCCCGCTGCC
TGGAGCGGCATCTACTCCCTCCGCTGTAGTACTGGCCGCTGGCCTAAGGT
CGGAGTCAACACCAGCATGGCTGGCCAGGAAGGTGTTGCCAGTGTCTTCA
GTCCTATGGCCCGTACTTTGAACGATCTCACCTATTTCACCAAAGCTATT
GTCGGAATGAAGCCTTGGAACTACGACCATACCGTCCACCCTATCTCCTG
GAGAGAAGATGAGGAAATTGAAGCCCAAAACAAAAGGTTGAGGATCGGCC
TCATGAGCAACGATGGGACCTCAAGAGGAGGGAACGGGCGGCTCGATTTG
CATCGCTATCTCCCGATTATCATGCGCCCTTCTCGGCTATCGACAGGGTT
ATCATTAACAAGCCTATCCAGGACTTGGTATATGAGGTCCAGAATGATTC
CTTGGCACCTTTAGATGTCCTACGCACATACGGCAAGGTTGCAGTCAAGG
CTCACGAAAAGACCAATTGCGTGACTGAGCTTCTATTGCCTGAGGCAGAA
TCATGGGCTCAGTCCGAAGTAAACCTAAAAGGTCCCCTGGCGGGTGTGCC
TATCTCTTTGAAAGACTCGGTGCAAGTCAAAGGATTCGATATTACTCTGG
GGTATACCAAGTTCGCGTGTAAACCGTATAAGGAGGATGGTCCAATGGCA
AAGCTGTTGAAGGATGCTGATGCTTCCCCCCTTTGATTACTTTACGTATC
GTCGCATCCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009665-T1.utr3p1 | KJC3_009665-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023631 |
| DBxref | InterPro:IPR036928 |
| DBxref | PFAM:PF01425 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1060148..1062679 - |
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