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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1082484..1083539+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009671-T1 ID=KJC3_009671-T1|Name=KJC3_009671-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1056bp|location=Sequence derived from alignment at ch7:1082484..1083539+ (Aspergillus niger KJC3)
ATCTGCCTCAAACACACGATATGCAATTTAAGCAACTAGTTTGAACAAAA
GTCCACAATAATCAGCTAGCTAGTTGTCTAGTCGGTCAGTCAATCCAACA
GCAGCAAAAATGTCACGGTCATCCATCAACCCGGACGACATCAATCTGCT
AGCGCAATTCCTGGCCCACGAACAAATCCCAGCATCATCCCACCCCCCAA
TCAACGCCGACTGCATCGTGATATGCGTTTCGGCAGTGCTTTATCCCGCA
ACGACCGTTTTCAAACACCTAGAACGCAATCCCCAAATAACCAAAACACT
AGTGCTATGCGGTGGAATCGGCCATTCCACGCCTTATCTCTACGAGGCCG
TATCCAAGCACCCAGACTACGCACAGCTCATCCCAGAAATCACAGGCAAG
CCAGAATCTCATGTCCTGCATACCATCTTCACCCGGTGCTTTGATGCCAC
CTTCATCCAGAAATCCGGCTGCACGGTTCTACTAGAAGATAAGTCCACGA
ATTGCGGCCAGAATGCCACAGAAACACGGGCATTATTAGCAAGGAATGGT
ATTCCGGAACCTAAATCTATGATTGTTGTTCAGGATCCGACCATGGCTCG
GCGGACGGTTGCCTCATTTGAAAAGGCGTATGCGCCGAGGCCCCCAAACT
TGCTCAGCTGGCCGATTATAGTGCCCCGAGTTAAGATGGAGGGGTGTGAG
TTGGTGTATGATTATGATGATGTTGATGAGAGTATGCCAGGGGTGACCGG
GGGTTTGTGGAGTATGTCACGCTTCTTGGGTCTGGTTCTGGGTGAGATCC
CACGGTTGAGGGATGATGAGCATGGGTATGGGCCCATGGGTAAGGGGTTT
ATTGGTCATGTTGATATTCCTGAGGAAGTTGAGTGCGCGTTTTCTAGGGT
CCAAGGGGGAATAGGAGAGGATTTGGTGAAGAGATAGATAGATCTTTTCC
AGGTCGTGTTGTGGCTGTGGTTTTACTATGGGGAATCTCGCGATCGGAAC
TGCCGAGATATCCACTAGAGACCCATATTCATGATACCATGCCGTGTGTA
TCTGAC back to topCoding sequence (CDS) from alignment at ch7:1082484..1083539+ >KJC3_009671-T1 ID=KJC3_009671-T1|Name=KJC3_009671-T1|organism=Aspergillus niger KJC3|type=CDS|length=828bp|location=Sequence derived from alignment at ch7:1082484..1083539+ (Aspergillus niger KJC3)
ATGTCACGGTCATCCATCAACCCGGACGACATCAATCTGCTAGCGCAATT
CCTGGCCCACGAACAAATCCCAGCATCATCCCACCCCCCAATCAACGCCG
ACTGCATCGTGATATGCGTTTCGGCAGTGCTTTATCCCGCAACGACCGTT
TTCAAACACCTAGAACGCAATCCCCAAATAACCAAAACACTAGTGCTATG
CGGTGGAATCGGCCATTCCACGCCTTATCTCTACGAGGCCGTATCCAAGC
ACCCAGACTACGCACAGCTCATCCCAGAAATCACAGGCAAGCCAGAATCT
CATGTCCTGCATACCATCTTCACCCGGTGCTTTGATGCCACCTTCATCCA
GAAATCCGGCTGCACGGTTCTACTAGAAGATAAGTCCACGAATTGCGGCC
AGAATGCCACAGAAACACGGGCATTATTAGCAAGGAATGGTATTCCGGAA
CCTAAATCTATGATTGTTGTTCAGGATCCGACCATGGCTCGGCGGACGGT
TGCCTCATTTGAAAAGGCGTATGCGCCGAGGCCCCCAAACTTGCTCAGCT
GGCCGATTATAGTGCCCCGAGTTAAGATGGAGGGGTGTGAGTTGGTGTAT
GATTATGATGATGTTGATGAGAGTATGCCAGGGGTGACCGGGGGTTTGTG
GAGTATGTCACGCTTCTTGGGTCTGGTTCTGGGTGAGATCCCACGGTTGA
GGGATGATGAGCATGGGTATGGGCCCATGGGTAAGGGGTTTATTGGTCAT
GTTGATATTCCTGAGGAAGTTGAGTGCGCGTTTTCTAGGGTCCAAGGGGG
AATAGGAGAGGATTTGGTGAAGAGATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009671-T1.utr5p1 | KJC3_009671-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009671-T1.utr3p1 | KJC3_009671-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003848 |
| DBxref | InterPro:IPR014729 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1082484..1083539 + |
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