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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1117830..1120246+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009682-T1 ID=KJC3_009682-T1|Name=KJC3_009682-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2417bp|location=Sequence derived from alignment at ch7:1117830..1120246+ (Aspergillus niger KJC3)
CTAAAGCACAGCTGCAGGTCTCCGTCACCTGACAGCGGGGTTGGGTTGTG
ACTTGGAATTCACTTACCGCTCATCTTTTGCTCGCTGTCTTTCATCCCAA
TCCTATCATTATCTGCTTCCACAATGACATCAGTCCAATTCGATGGTCGA
AACTCAGGCTTCCAAACCGGGAACAATTACGGTAGCATTCAATATACTGT
TGGTAAGAAACTGAGGACCATGTTTACTGTTTAATTCTTCCTGAAAACCT
AAGCATAGCTGACATTTCATCCTATTAGAGCAGGGTTCAGATCCTCGAGA
CGAGAAAGTAAAAGAGTTCTTAAGTCTGCTCAACACTTGTCCCTACGAGG
ACCGGAAAAACAGAAACAATAGACGAGTCCCGGGAACCTGTGAATGGTTT
ACAACACATCTGAAATTCACCAACTGGCAACAGTCTACAAGTCATGATCT
TGCCGGTCTACTATGGGTCTCAGCCGATCCAGGTTGCGGCAAGTCAGTTC
TAACAAGGTACCTGGTAGATGAGGTTCTCTGCAATGAGAAGCAAACTGTG
TGTTATTTCTTCTTCAAAGACGACTTCCCGGATCAAAGGAATGCAGCAGG
TGCACTATCACCTATCTTGCACCAGATTTTTGTTGCGCAGCCCCAGCTTC
TATCGGATACAGTTCTGAAAAAGCTGGAGACTGATGGAGAAAAGCTTATC
CAGTCGTTCCATAAATTATGGGACATACTCATGTCTGTCTCTGCTCAAGA
AGAAGCCAGAGAAATTATTTGCATTCTCGATGCATTAGATGAGTGTCGAG
ATCGTGATGAACTTATTGAAGCTGTCACCATGTTTTACCAAGGACTTCAT
AGAGACCGGAAGCTGAAATTCTTGATGACAAGCAGACCATATCCTCATAT
AGAGCGCCTATTTTGGAAACTGCGGACCAGGCTGCCGACGATACACCTAA
GTGGGGATGGCGAGGAAGAAGTCCAGAAAATCTCCCATGAGATAGGTCTT
GTCATCAGCAAAAGAGTGAGCGATATCGGTAAACAGAGATCACTTGAAGA
AGATGAACGCAACTTGCTGGAACAACAATTGACTGCGGTTGAAAATCGAA
CATATTTATGGGTCAGCCTCACCTTGGACGTACTCGAGAATATGCCGGGT
TTCACCAAGGGGAATATTCGACGCGTGATACAGCATCTTCCTACAACTGT
TGAGAGTGCCTATGAAAGAATCTTGGACCGGAGCTTGGATAAGAAGAAAG
CCAAAGTTCTTCTTCACATAATTACAGCTGCTGTACGGCCTTTTTCTTTG
GAAGAGTTATCTTTTGCCTGGGCAATACACATCAATCTAGTTGACACGAA
TCTCACCGCTATAAGCGATGACTTGGAACCAAAGGAGAGATTCAGAGAAA
CCCTGAGGGATCTGTGCGGACTTTTCGTGGTTGTTATAGACGAGAAGATT
TATCTTCTGCATCAAACCGCGAAAGAATTCTTAGTCCAGAGCAACATATC
CACTGTGAAACAAAACTCTCAGGTCACAGGATGGAAAGGTGCACTCAAAC
CAGAGGAGTCTAATGAAATCCTTGCGCTCATATGCATCTCATGGCTACCA
AGGATAAATGCTGCTCAAAGGGATATTGAGCGAGGGGAATTTGATGAGTA
TTCCTCGTGCCATTGGATCACGCACTATCATCAAGCAAATGTACAAGATG
GAAACGTGCTAATCATGCGCGCGCAGTCAGTCTGTGACCCAAGCTCTGAT
GTGTATCCGGTATGGTCCAAGCTGTATGCAGCTGAGATGGATATTATTCC
TAGGAGTACTTCAAGGCTTTTGATTGCATCATTCTTCGGGCTAACTGGTG
TGGTGAAGCCTCTGCTTGCAACAGGAAATGTGAATATCAACTCTAAGGGT
TCAGATTCACGGGCCGCACTGTTCTGGAAAAAGCCGGTAATGAAGCTTCT
GCTTGGAACAAAAAAGATGGAAATGAACTCTAGGGACTCAGAGGAAGGCC
TGACTCCGCTATCCTGGGCAGCCAGGAATGGCCATGAGGCAGTTGTAAAG
CTTCTGCTTGAAACAAAGACGGACATAAATATCAAGGATTCAAGGGGCCG
GACCCCATTGTCCTGGGCAGCCAGGGATGGCCATGAGGCAGTAGTAAAGC
TTCTGCTTCAAACAAAAAAGGTGGACATAAATTCAAAGGATTCAGATGGC
TGGACTCCATTGTCCTTGGCAGCTGAGTATGGCCATGAGGCAGTGGTGAA
GCTTCTCCAAAACTACTAGTGCCTACTTTCCTACAGAAGTGGTTCTTCTT
ATGATATTCTCTAGTATTATTTCAATTCTGTTTGTTTCATTGATCACATA
TAGAAATTGGGTAGTTACACCACCGTCTTACTGTACCTTCAAGATCTAAT
TCATCACTTTGTCGCTA back to topCoding sequence (CDS) from alignment at ch7:1117830..1120246+ >KJC3_009682-T1 ID=KJC3_009682-T1|Name=KJC3_009682-T1|organism=Aspergillus niger KJC3|type=CDS|length=4140bp|location=Sequence derived from alignment at ch7:1117830..1120246+ (Aspergillus niger KJC3)
ATGACATCAGTCCAATTCGATGGTCGAAACTCAGGCTTCCAAACCGGGAA
CAATTACGGTAGCATTCAATATACTGTTGAGCAGGGTTCAGATCCTCGAG
ACGAGAAAGTAAAAGAGTTCTTAAGTCTGCTCAACACTTGTCCCTACGAG
GACCGGAAAAACAGAAACAATAGACGAGTCCCGGGAACCTGTGAATGGTT
TACAACACATCTGAAATTCACCAACTGGCAACAGTCTACAAGTCATGATC
TTGCCGGTCTACTATGGGTCTCAGCCGATCCAGGTTGCGGCAAGTCAGTT
CTAACAAGGTACCTGGTAGATGAGGTTCTCTGCAATGAGAAGCAAACTGT
GTGTTATTTCTTCTTCAAAGACGACTTCCCGGATCAAAGGAATGCAGCAG
GTGCACTATCACCTATCTTGCACCAGATTTTTGTTGCGCAGCCCCAGCTT
CTATCGGATACAGTTCTGAAAAAGCTGGAGACTGATGGAGAAAAGCTTAT
CCAGTCGTTCCATAAATTATGGGACATACTCATGTCTGTCTCTGCTCAAG
AAGAAGCCAGAGAAATTATTTGCATTCTCGATGCATTAGATGAGTGTCGA
GATCGTGATGAACTTATTGAAGCTGTCACCATGTTTTACCAAGGACTTCA
TAGAGACCGGAAGCTGAAATTCTTGATGACAAGCAGACCATATCCTCATA
TAGAGCGCCTATTTTGGAAACTGCGGACCAGGCTGCCGACGATACACCTA
AGTGGGGATGGCGAGGAAGAAGTCCAGAAAATCTCCCATGAGATAGGTCT
TGTCATCAGCAAAAGAGTGAGCGATATCGGTAAACAGAGATCACTTGAAG
AAGATGAACGCAACTTGCTGGAACAACAATTGACTGCGGTTGAAAATCGA
ACATATTTATGGGTCAGCCTCACCTTGGACGTACTCGAGAATATGCCGGG
TTTCACCAAGGGGAATATTCGACGCGTGATACAGCATCTTCCTACAACTG
TTGAGAGTGCCTATGAAAGAATCTTGGACCGGAGCTTGGATAAGAAGAAA
GCCAAAGTTCTTCTTCACATAATTACAGCTGCTGTACGGCCTTTTTCTTT
GGAAGAGTTATCTTTTGCCTGGGCAATACACATCAATCTAGTTGACACGA
ATCTCACCGCTATAAGCGATGACTTGGAACCAAAGGAGAGATTCAGAGAA
ACCCTGAGGGATCTGTGCGGACTTTTCGTGGTTGTTATAGACGAGAAGAT
TTATCTTCTGCATCAAACCGCGAAAGAATTCTTAGTCCAGAGCAACATAT
CCACTGTGAAACAAAACTCTCAGGTCACAGGATGGAAAGGTGCACTCAAA
CCAGAGGAGTCTAATGAAATCCTTGCGCTCATATGCATCTCATGGCTACC
AAGGATAAATGCTGCTCAAAGGGATATTGAGCGAGGGGAATTTGATGAGT
ATTCCTCGTGCCATTGGATCACGCACTATCATCAAGCAAATGTACAAGAT
GGAAACGTGCTAATCATGCGCGCGCAGTCAGTCTGTGACCCAAGCTCTGA
TGTGTATCCGGTATGGTCCAAGCTGTATGCAGCTGAGATGGATATTATTC
CTAGGAGTACTTCAAGGCTTTTGATTGCATCATTCTTCGGGCTAACTGGT
GTGGTGAAGCCTCTGCTTGCAACAGGAAATGTGAATATCAACTCTAAGGG
TTCAGATTCACGGGCCGCACTGTTCTGGAAAAAGCCGGTAATGAAGCTTC
TGCTTGGAACAAAAAAGATGGAAATGAACTCTAGGGACTCAGAGGAAGGC
CTGACTCCGCTATCCTGGGCAGCCAGGAATGGCCATGAGGCAGTTGTAAA
GCTTCTGCTTGAAACAAAGACGGACATAAATATCAAGGATTCAAGGGGCC
GGACCCCATTGTCCTGGGCAGCCAGGGATGGCCATGAGGCAGTAGTAAAG
CTTCTGCTTCAAACAAAAAAGGTGGACATAAATTCAAAGGATTCAGATGG
CTGGACTCCATTGTCCTTGGCAGCTGAGTATGGCCATGAGGCAGTGGTGA
AGCTTCTCCAAAACTACTAGATGACATCAGTCCAATTCGATGGTCGAAAC
TCAGGCTTCCAAACCGGGAACAATTACGGTAGCATTCAATATACTGTTGA
GCAGGGTTCAGATCCTCGAGACGAGAAAGTAAAAGAGTTCTTAAGTCTGC
TCAACACTTGTCCCTACGAGGACCGGAAAAACAGAAACAATAGACGAGTC
CCGGGAACCTGTGAATGGTTTACAACACATCTGAAATTCACCAACTGGCA
ACAGTCTACAAGTCATGATCTTGCCGGTCTACTATGGGTCTCAGCCGATC
CAGGTTGCGGCAAGTCAGTTCTAACAAGGTACCTGGTAGATGAGGTTCTC
TGCAATGAGAAGCAAACTGTGTGTTATTTCTTCTTCAAAGACGACTTCCC
GGATCAAAGGAATGCAGCAGGTGCACTATCACCTATCTTGCACCAGATTT
TTGTTGCGCAGCCCCAGCTTCTATCGGATACAGTTCTGAAAAAGCTGGAG
ACTGATGGAGAAAAGCTTATCCAGTCGTTCCATAAATTATGGGACATACT
CATGTCTGTCTCTGCTCAAGAAGAAGCCAGAGAAATTATTTGCATTCTCG
ATGCATTAGATGAGTGTCGAGATCGTGATGAACTTATTGAAGCTGTCACC
ATGTTTTACCAAGGACTTCATAGAGACCGGAAGCTGAAATTCTTGATGAC
AAGCAGACCATATCCTCATATAGAGCGCCTATTTTGGAAACTGCGGACCA
GGCTGCCGACGATACACCTAAGTGGGGATGGCGAGGAAGAAGTCCAGAAA
ATCTCCCATGAGATAGGTCTTGTCATCAGCAAAAGAGTGAGCGATATCGG
TAAACAGAGATCACTTGAAGAAGATGAACGCAACTTGCTGGAACAACAAT
TGACTGCGGTTGAAAATCGAACATATTTATGGGTCAGCCTCACCTTGGAC
GTACTCGAGAATATGCCGGGTTTCACCAAGGGGAATATTCGACGCGTGAT
ACAGCATCTTCCTACAACTGTTGAGAGTGCCTATGAAAGAATCTTGGACC
GGAGCTTGGATAAGAAGAAAGCCAAAGTTCTTCTTCACATAATTACAGCT
GCTGTACGGCCTTTTTCTTTGGAAGAGTTATCTTTTGCCTGGGCAATACA
CATCAATCTAGTTGACACGAATCTCACCGCTATAAGCGATGACTTGGAAC
CAAAGGAGAGATTCAGAGAAACCCTGAGGGATCTGTGCGGACTTTTCGTG
GTTGTTATAGACGAGAAGATTTATCTTCTGCATCAAACCGCGAAAGAATT
CTTAGTCCAGAGCAACATATCCACTGTGAAACAAAACTCTCAGGTCACAG
GATGGAAAGGTGCACTCAAACCAGAGGAGTCTAATGAAATCCTTGCGCTC
ATATGCATCTCATGGCTACCAAGGATAAATGCTGCTCAAAGGGATATTGA
GCGAGGGGAATTTGATGAGTATTCCTCGTGCCATTGGATCACGCACTATC
ATCAAGCAAATGTACAAGATGGAAACGTGCTAATCATGCGCGCGCAGTCA
GTCTGTGACCCAAGCTCTGATGTGTATCCGGTATGGTCCAAGCTGTATGC
AGCTGAGATGGATATTATTCCTAGGAGTACTTCAAGGCTTTTGATTGCAT
CATTCTTCGGGCTAACTGGTGTGGTGAAGCCTCTGCTTGCAACAGGAAAT
GTGAATATCAACTCTAAGGGTTCAGATTCACGGGCCGCACTGTTCTGGAA
AAAGCCGGTAATGAAGCTTCTGCTTGGAACAAAAAAGATGGAAATGAACT
CTAGGGACTCAGAGGAAGGCCTGACTCCGCTATCCTGGGCAGCCAGGAAT
GGCCATGAGGCAGTTGTAAAGCTTCTGCTTGAAACAAAGACGGACATAAA
TATCAAGGATTCAAGGGGCCGGACCCCATTGTCCTGGGCAGCCAGGGATG
GCCATGAGGCAGTAGTAAAGCTTCTGCTTCAAACAAAAAAGGTGGACATA
AATTCAAAGGATTCAGATGGCTGGACTCCATTGTCCTTGGCAGCTGAGTA
TGGCCATGAGGCAGTGGTGAAGCTTCTCCAAAACTACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009682-T1.utr5p1 | KJC3_009682-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009682-T1.utr3p1 | KJC3_009682-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1117830..1120246 + |
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