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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1195114..1197325+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009710-T2 ID=KJC3_009710-T2|Name=KJC3_009710-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2212bp|location=Sequence derived from alignment at ch7:1195114..1197325+ (Aspergillus niger KJC3)
CCCCCCCTCCCCTCTCCATGCCCCGACCCCTCCTCCTCCCTGTTGCTGCC
CGTCAAAGCTTCTTCCTTCGTGCTTCAGCTCGTTGGTCCCCTTGCTGCCC
CTCCTCCTCATCCTCTATTCCTTTTCCCTCTTCATCCGCCCGCATCCCCC
TCCGCTGTCGTTGCAGCTGTCGCAACTCGGCTCTCTGTCGCTGCTCCTGC
TGTACTCACCCCACTTCGGCTTCCTCTAGATCTTTCACATCCTCTTCTTC
TTGTTGTTCATCAGCTACGAAATTAAACCCCTCCTCTCTTCCCATCCACC
CCTCCTTACGAGCATCATCACGTACACCCTTCTCCACCAATTCCCTCAAA
ATGGCCCAGGATTACAAACTCAAGGACATCACGTCCCTGGCGGACGTCAA
GGACATGGACAAGGTCGAGTGTGAGGTCGACGGGATTCAGGATGGAAAGG
TCCTCCTGGTTAGGTATAACGGTCAGGTTCACGCTATGACCCCCAAGTGT
ACCCACTATGGTGCGCCGTTGAAGCTGGGTGTGGTGGCTCCTGAGGGGAG
GATTACTTGTCCTTGGCATGGTGGTAAGTCTTTCTTTCTTTTGCTTGATT
TAGATGTGAATGAGTAGGAGTGAATCGTTAATGTCGATGTTGCATAGCTT
GCTTTAATGTGGAGACTGGTGATGTTGAAGATGCGCCGGCCCCGAATGCG
TTGAAGAAATTCGAGGTGTTCGAGAAGAATGGTGCTGTCTATATCAATGC
CAATGAAGCCGATGTTAAGGCGGCTCAGAGAGATCCCGCTGTCAAGTGTA
GTGCTTCGCCGCAGGAGAAGTTGGTTGTTGTTGGCGGGTAAGTCGAGTCC
TCTGTGGAAGTTAGGGTCAGATAGTAACGGAGTCTCTGCAGTGGAAGTGG
TACTTTTGGTGTGGTTCAGGCGATCCGTGAAATGAAGTACAAGGGTGCCA
TCACTGTCATCACCCGCGAACCTAACCTCATTATTGACCGTACGAAGCTA
TCCAAGGCGCTGATTGCTGATGCCGCGAAGATCCAGTGGCGGCCTGAGGA
GTGGTATAAGGAAGCTTCTATTGAGGTCGCCCATGATGATGTGACGGGCG
TTGATTTCCAGAAGAAGACGGTGACCACCCAGTCTGGCAAGTCGTACCCT
TACACTAAGTTGGTCCTTGCGACAGGAGGTGTGCCGCGCACCCTCCCTCA
GGAAGGATTCAAGGACCTTGGAAATATATTCGTGCTCCGCACCATTCCGG
ACGTGCAGGCCATTCACCAGGCACTGGGCGAGCAGAAGAACAAGAAGGTC
GTTGTCATCGGCAGCTCCTTCATCGGTATGGAAGTGGGCAATTGCCTTGC
CAAGGAGAACGACGTCACCATCGTCGGCATGGAGAAGGCCCCGATGGAAC
GCGTGATGGGCGAGCAGGTCGGCCGCATCTTCCAAGGTAACCTGGAGAAG
GCGGGCGTCAAGTTCAAGCTTTCCGCCAGCGTGGACAAGGCGACGCCCTC
CAGCACGGATTCCAGCAAGGTCGGCGCAGTCCACCTGAAAGACGGCACCG
TGCTTCCAGCAGACCTGGTCATTCTCGGAGTGGGAGTGCGTCCCGCTACT
GACTTCCTTCAAGGCAACCCATCCGTCACTCTCGAGCAGGATGGATCCAT
CAAGACCAACGAGCACTTCGCGGTCCCAGGATTGAACGACGACGTCTTTG
CCATTGGCGACATCGCCACCTACCCGTACCACGGGCCGGGAGCAGACCAG
GACAAGGGCACATACACCCGTATCGAACATTGGAACGTGGCCCAGAATGC
CGGACGAGGAGTAGCGCGCGCAATTGTCCACAGTGGATCATTGCAATCGC
TCAAGCCCAAGGCGTTTATCCCAATCTTCTGGTCCGCCCTCGGTGCCCAG
CTGCGCTACTGCGGAAGCACCGTGGGTGGATGGGACGATCTGGTGATGAA
GGGAGAGCCCGAGAACGCCAAGTTCGCTGCGTATTACTGCAAGGGCGACA
CGGTGGTGGCCGTTGCCACGATGGGCATGGACCCGGTGATGGTCAAGTCT
GCCGAACTGATGCGGCGGAAGAATATGCCGACCAAATCGCAAATCCAGAG
TGGAGTGGATGTGCTGACTGTGGGTGTGCCTGAGTCTGTGAGGATCTAAT
TGCATTTAAATTAGCAATGATAAATTAATATACCTGAATTGAACCCGAAT
ATTGTGTAATCC back to topCoding sequence (CDS) from alignment at ch7:1195114..1197325+ >KJC3_009710-T2 ID=KJC3_009710-T2|Name=KJC3_009710-T2|organism=Aspergillus niger KJC3|type=CDS|length=1218bp|location=Sequence derived from alignment at ch7:1195114..1197325+ (Aspergillus niger KJC3)
ATGAAGTACAAGGGTGCCATCACTGTCATCACCCGCGAACCTAACCTCAT
TATTGACCGTACGAAGCTATCCAAGGCGCTGATTGCTGATGCCGCGAAGA
TCCAGTGGCGGCCTGAGGAGTGGTATAAGGAAGCTTCTATTGAGGTCGCC
CATGATGATGTGACGGGCGTTGATTTCCAGAAGAAGACGGTGACCACCCA
GTCTGGCAAGTCGTACCCTTACACTAAGTTGGTCCTTGCGACAGGAGGTG
TGCCGCGCACCCTCCCTCAGGAAGGATTCAAGGACCTTGGAAATATATTC
GTGCTCCGCACCATTCCGGACGTGCAGGCCATTCACCAGGCACTGGGCGA
GCAGAAGAACAAGAAGGTCGTTGTCATCGGCAGCTCCTTCATCGGTATGG
AAGTGGGCAATTGCCTTGCCAAGGAGAACGACGTCACCATCGTCGGCATG
GAGAAGGCCCCGATGGAACGCGTGATGGGCGAGCAGGTCGGCCGCATCTT
CCAAGGTAACCTGGAGAAGGCGGGCGTCAAGTTCAAGCTTTCCGCCAGCG
TGGACAAGGCGACGCCCTCCAGCACGGATTCCAGCAAGGTCGGCGCAGTC
CACCTGAAAGACGGCACCGTGCTTCCAGCAGACCTGGTCATTCTCGGAGT
GGGAGTGCGTCCCGCTACTGACTTCCTTCAAGGCAACCCATCCGTCACTC
TCGAGCAGGATGGATCCATCAAGACCAACGAGCACTTCGCGGTCCCAGGA
TTGAACGACGACGTCTTTGCCATTGGCGACATCGCCACCTACCCGTACCA
CGGGCCGGGAGCAGACCAGGACAAGGGCACATACACCCGTATCGAACATT
GGAACGTGGCCCAGAATGCCGGACGAGGAGTAGCGCGCGCAATTGTCCAC
AGTGGATCATTGCAATCGCTCAAGCCCAAGGCGTTTATCCCAATCTTCTG
GTCCGCCCTCGGTGCCCAGCTGCGCTACTGCGGAAGCACCGTGGGTGGAT
GGGACGATCTGGTGATGAAGGGAGAGCCCGAGAACGCCAAGTTCGCTGCG
TATTACTGCAAGGGCGACACGGTGGTGGCCGTTGCCACGATGGGCATGGA
CCCGGTGATGGTCAAGTCTGCCGAACTGATGCGGCGGAAGAATATGCCGA
CCAAATCGCAAATCCAGAGTGGAGTGGATGTGCTGACTGTGGGTGTGCCT
GAGTCTGTGAGGATCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009710-T2.utr5p1 | KJC3_009710-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009710-T2.utr3p1 | KJC3_009710-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR028202 |
| DBxref | InterPro:IPR023753 |
| DBxref | InterPro:IPR016156 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF14759 |
| DBxref | PFAM:PF07992 |
| DBxref | PFAM:PF00070 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1195114..1197325 + |
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