You are here

Home

KJC3_009717-T1, KJC3_009717-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009717-T1
Unique NameKJC3_009717-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1213003..1214762-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009717-T1 ID=KJC3_009717-T1|Name=KJC3_009717-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1760bp|location=Sequence derived from alignment at ch7:1213003..1214762- (Aspergillus niger KJC3)
ATGTCTCTCTCCCTCCTCACAGCCCAATACTTCCAACAACTTGATCCCCA
TCTCCTCACCTTCCCCGAAGACAATTACCTCCTCCACCCCACCACCCAAG
AAACCATCTACAATACTCTCTTCTCCGAATCCCACGCCGCAAATGACCAT
CCCCTCCCCCCACCCGCCTACCGCACGCGCGTGCTCAAGCGCCTCATCAC
AAAACTAGAATCCCTACTCTCCAACCCCGAGGAGGATGTACGCTGATCCT
GATCCATATCCCTTGAGTATGCGCTGCATACCCTACCTCCCTCTCTCTCT
CTCTCTCTCTCTCTCCAATTCCCTCCTAGGAACAACCCCACTAACCCAAT
TTCATTCAATCCAAATATAGGAAATCAACGAATCCCTCCTCGAAGAATAC
AGCACGCTCCTCACCCTCCCCAAACCCTCCTCAATCGAACAAGCCCAACA
ACTCACCTACATCACCTACACCGCGCCACCAGAAGATGACCCTCACCATT
CCTCATCCCAATCGAAAGAGCGGAGAACAATCCTCACCTCCGAATCCCGC
TCCGCAATCATAACCGCCGGCACAACCGGCCACCGAACTTGGGAAGCGGC
ACTGCATCTCGCCACGTACCTCTCTACGGCAGCAGGACGGGCGCACATCA
CCGGGAAGAAAGTCCTTGAGCTCGGCGCCGGCACGGGCCTCGTGTCGATG
TTCTGTGCGAGGTATCTTGAGCCGGAGGTGGTGGTGGCTACGGATCGGGA
GCTGGGGTTGATGAGGCAGATAGGGGACTGCGCGGGACGGAATGGGTTAG
CTGGAGATGGGGATGGGGTGTTTAAGGGGTGGATTTGGGAGTGGGGGAGG
GAGTTGTCTAGGGGGGTTGGTGAGGATGAGGATGATGATGATAGCCAAAT
GAAGGAGGATGGTGAGGTGGATGGTGGGAAGGTAGAGTTTGATGTTGCGC
TGGGTGCGGATCTGGTACGTTATTCTCTTTCTCTCCTTCCTTCATGTTCA
TTGGGTTGTATACCATGGATGGACAATGTGCAACTCTGGACCGGGTTACT
GGGTGCAATCGCCTAATCTGGAGCGAGTTTCCTGGTTCATATTTTCAGCA
TTTTCCACTCCATCCTTTTTCCCTTCCCTTCCCTTGGGTATGGTAGCTAC
GCTACGTAGCTCTATGGTGTGCATCATGCTGTGTTGTGTTGTGTACTGTG
CTGCTGTGTCGCGTTGCACTACATACCTACATACCTACCTACCTCACCTC
ACCCCAATCCAGAAGTTAAATGTACTGACAAATACTCATCCAGATCTACG
ACATCGACCTCGTCCCCCTCCTCGTGCAGACCGTCAAATCCCTCTTCGAG
AAATACGCCGTCAAGGAATTTCTCATCTCCGCGACATTACGCAATGAGCG
TACTTTTGGCGCGTTTTTGAATGCTTGTGGTGCGTTTGTCCCTTCCCGTT
TCTCAAACACTGGTATGGATATTATTCATGTCTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGAAACCAACTAACGGGATGTGCGTGTCGAGC
AGAGGAGAGTGCATTGAAGGTGGAACGGGTTCCGTTTGAGTCGCCGGCGG
AGGAAGTGCAGACGGGGTTTTTTCATTCCACGGTTATTCCGATTAGGACG
TATAAGATTACTGCGTAGGTTTGCTGTGTAATAAGGGGATGGATATGGGT
GTATATTTTAGCAATAGACAAGAATGATGATTTAGTTAAGTGTATACTGT
CTGTTTCAAG
back to top

Coding sequence (CDS) from alignment at ch7:1213003..1214762-

>KJC3_009717-T1 ID=KJC3_009717-T1|Name=KJC3_009717-T1|organism=Aspergillus niger KJC3|type=CDS|length=3177bp|location=Sequence derived from alignment at ch7:1213003..1214762- (Aspergillus niger KJC3)
ATCTACGACATCGACCTCGTCCCCCTCCTCGTGCAGACCGTCAAATCCCT
CTTCGAGAAATACGCCGTCAAGGAATTTCTCATCTCCGCGACATTACGCA
ATGAGCGTACTTTTGGCGCGTTTTTGAATGCTTGTGGTGCGTTTGTCCCT
TCCCGTTTCTCAAACACTGGTATGGATATTATTCATGTCTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGAGAAATCAACGAATCCCTCCTCG
AAGAATACAGCACGCTCCTCACCCTCCCCAAACCCTCCTCAATCGAACAA
GCCCAACAACTCACCTACATCACCTACACCGCGCCACCAGAAGATGACCC
TCACCATTCCTCATCCCAATCGAAAGAGCGGAGAACAATCCTCACCTCCG
AATCCCGCTCCGCAATCATAACCGCCGGCACAACCGGCCACCGAACTTGG
GAAGCGGCACTGCATCTCGCCACGTACCTCTCTACGGCAGCAGGACGGGC
GCACATCACCGGGAAGAAAGTCCTTGAGCTCGGCGCCGGCACGGGCCTCG
TGTCGATGTTCTGTGCGAGGTATCTTGAGCCGGAGGTGGTGGTGGCTACG
GATCGGGAGCTGGGGTTGATGAGGCAGATAGGGGACTGCGCGGGACGGAA
TGGGTTAGCTGGAGATGGGGATGGGGTGTTTAAGGGGTGGATTTGGGAGT
GGGGGAGGGAGTTGTCTAGGGGGGTTGGTGAGGATGAGGATGATGATGAT
AGCCAAATGAAGGAGGATGGTGAGGTGGATGGTGGGAAGGTAGAGTTTGA
TGTTGCGCTGGGTGCGGATCTGATGTCTCTCTCCCTCCTCACAGCCCAAT
ACTTCCAACAACTTGATCCCCATCTCCTCACCTTCCCCGAAGACAATTAC
CTCCTCCACCCCACCACCCAAGAAACCATCTACAATACTCTCTTCTCCGA
ATCCCACGCCGCAAATGACCATCCCCTCCCCCCACCCGCCTACCGCACGC
GCGTGCTCAAGCGCCTCATCACAAAACTAGAATCCCTACTCTCCAACCCC
GAGGAGGATATCTACGACATCGACCTCGTCCCCCTCCTCGTGCAGACCGT
CAAATCCCTCTTCGAGAAATACGCCGTCAAGGAATTTCTCATCTCCGCGA
CATTACGCAATGAGCGTACTTTTGGCGCGTTTTTGAATGCTTGTGGTGCG
TTTGTCCCTTCCCGTTTCTCAAACACTGGTATGGATATTATTCATGTCTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAAATCAACGAAT
CCCTCCTCGAAGAATACAGCACGCTCCTCACCCTCCCCAAACCCTCCTCA
ATCGAACAAGCCCAACAACTCACCTACATCACCTACACCGCGCCACCAGA
AGATGACCCTCACCATTCCTCATCCCAATCGAAAGAGCGGAGAACAATCC
TCACCTCCGAATCCCGCTCCGCAATCATAACCGCCGGCACAACCGGCCAC
CGAACTTGGGAAGCGGCACTGCATCTCGCCACGTACCTCTCTACGGCAGC
AGGACGGGCGCACATCACCGGGAAGAAAGTCCTTGAGCTCGGCGCCGGCA
CGGGCCTCGTGTCGATGTTCTGTGCGAGGTATCTTGAGCCGGAGGTGGTG
GTGGCTACGGATCGGGAGCTGGGGTTGATGAGGCAGATAGGGGACTGCGC
GGGACGGAATGGGTTAGCTGGAGATGGGGATGGGGTGTTTAAGGGGTGGA
TTTGGGAGTGGGGGAGGGAGTTGTCTAGGGGGGTTGGTGAGGATGAGGAT
GATGATGATAGCCAAATGAAGGAGGATGGTGAGGTGGATGGTGGGAAGGT
AGAGTTTGATGTTGCGCTGGGTGCGGATCTGATGTCTCTCTCCCTCCTCA
CAGCCCAATACTTCCAACAACTTGATCCCCATCTCCTCACCTTCCCCGAA
GACAATTACCTCCTCCACCCCACCACCCAAGAAACCATCTACAATACTCT
CTTCTCCGAATCCCACGCCGCAAATGACCATCCCCTCCCCCCACCCGCCT
ACCGCACGCGCGTGCTCAAGCGCCTCATCACAAAACTAGAATCCCTACTC
TCCAACCCCGAGGAGGATATCTACGACATCGACCTCGTCCCCCTCCTCGT
GCAGACCGTCAAATCCCTCTTCGAGAAATACGCCGTCAAGGAATTTCTCA
TCTCCGCGACATTACGCAATGAGCGTACTTTTGGCGCGTTTTTGAATGCT
TGTGGTGCGTTTGTCCCTTCCCGTTTCTCAAACACTGGTATGGATATTAT
TCATGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAAA
TCAACGAATCCCTCCTCGAAGAATACAGCACGCTCCTCACCCTCCCCAAA
CCCTCCTCAATCGAACAAGCCCAACAACTCACCTACATCACCTACACCGC
GCCACCAGAAGATGACCCTCACCATTCCTCATCCCAATCGAAAGAGCGGA
GAACAATCCTCACCTCCGAATCCCGCTCCGCAATCATAACCGCCGGCACA
ACCGGCCACCGAACTTGGGAAGCGGCACTGCATCTCGCCACGTACCTCTC
TACGGCAGCAGGACGGGCGCACATCACCGGGAAGAAAGTCCTTGAGCTCG
GCGCCGGCACGGGCCTCGTGTCGATGTTCTGTGCGAGGTATCTTGAGCCG
GAGGTGGTGGTGGCTACGGATCGGGAGCTGGGGTTGATGAGGCAGATAGG
GGACTGCGCGGGACGGAATGGGTTAGCTGGAGATGGGGATGGGGTGTTTA
AGGGGTGGATTTGGGAGTGGGGGAGGGAGTTGTCTAGGGGGGTTGGTGAG
GATGAGGATGATGATGATAGCCAAATGAAGGAGGATGGTGAGGTGGATGG
TGGGAAGGTAGAGTTTGATGTTGCGCTGGGTGCGGATCTGATGTCTCTCT
CCCTCCTCACAGCCCAATACTTCCAACAACTTGATCCCCATCTCCTCACC
TTCCCCGAAGACAATTACCTCCTCCACCCCACCACCCAAGAAACCATCTA
CAATACTCTCTTCTCCGAATCCCACGCCGCAAATGACCATCCCCTCCCCC
CACCCGCCTACCGCACGCGCGTGCTCAAGCGCCTCATCACAAAACTAGAA
TCCCTACTCTCCAACCCCGAGGAGGAT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009717KJC3_009717Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009717-T1KJC3_009717-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009717-T1.cdsKJC3_009717-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009717-T1.utr3p1KJC3_009717-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009717-T1.exon3KJC3_009717-T1.exon3Aspergillus niger KJC3exon
KJC3_009717-T1.exon2KJC3_009717-T1.exon2Aspergillus niger KJC3exon
KJC3_009717-T1.exon1KJC3_009717-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteBUSCO:EOG09263VOP
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR019410
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1213003..1214762 -
Powered by Drupal