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KJC3_009718-T1, KJC3_009718-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009718-T1
Unique NameKJC3_009718-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1215055..1216653+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009718-T1 ID=KJC3_009718-T1|Name=KJC3_009718-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1599bp|location=Sequence derived from alignment at ch7:1215055..1216653+ (Aspergillus niger KJC3)
GAGCCCGCCAACGACTGACAGCGACTTCGACAACCCGCGCCCCCCCGTTT
CTGCCCTTCAGCTTCTCCCTGTCGCACGCAGATTCTCGCTGTCAACTGCA
CCTGCAACCATGGCCGACGCTCCCGTTACCCTGCGGACTCGCAAGTTCAT
CCGCAACCCCCTGCTTGCTCGCAAGCAGATGGTCGTGTAAGCTCCCTTCA
CCATCGAGCTGGAAGGAAAGGAAGGAGGAAAGGGAAAGGAGAATACAAGC
GGATACAACAAGAGGAGGATTTAGGAGGAGGAAATTTGTCCGGATGGAAA
TGATCGATTTTTGAGCACACTCCAAGTATATACTAGAATATATTTTGTGT
GTGTGTTTCAATATCGATTATTGAAATTCGGACATATTGGACAGACAACC
TGGATATGGGGCAAACCAGCAAAGGAATAAACGGCATGCTGATGATTGAT
TTTCTTTTCCAACAGGGATGTCCTCCACCCCAACCGCGCCAACGTCTCCA
AGGACGAGCTCCGCGACAAGCTCGCCGACCTGTACAAGTCCAACAAGGAC
CAGGTCTCCGTCTTCGGTTTCCGTACGCAGTACGGTGGTGGTAAGAGCAC
TGGCTTCGCTCTCATCTACGACTCCCAGGAGGCCCTGAAGAAGTTCGAGC
CCCTCTACCGTCTGGTCCGCATCGGTGCTGGCACAAAGGTCGAGAAGCCC
AGCAGACAGCAGCGTATGTTCACACCCACCTATACTATTTCATCAATCAT
TCGAAAACCGAACCAATACTCACAATCCCTACAGGCAAGCAACGGAAGAA
CCGCTCCAAGAAGTTCCGCGGTACCGCCAAGACCAAGGGCCCCAAGAAGA
ACAAGGACTAAGCGGATCGTCACGATGGAATTCCGTGCGGTTGAGAGAGA
GGGGGGTCGTTGCAGGATTCGAATTCACTTTCGGATCATCGGATACCTTA
CTACTCGGACGACGACGAAGAATTAGAAGGAGACGAACGTCGACATGCGG
ACCCGGGCCTGAAGTGAAAAAAGAAGAAAGGAAAAATTGTTTCAATTTTT
TTTTATTCCCTGCTGGATATGAGGGGGAAAAGGAAAAAAGAAGAACACTG
GGTTGGTGTGTGTGGTTGTCGTGTGTGTATGTGAATGAGGGCGTTATCAT
CAAACTCGTTTCATGGTTTCTTTTTAACTCTCCCTCTATTCTACTTACCG
TATGGGGCGGGCACCGCATAATCCGCCTATGCTTTCCCTTTTTTCTCGTT
TCCTTTTTTTCTTTTCCCTCTTATCATATCACGAATTCCCCCTCCCTCTT
ATGAAGAATGAAAAAAAGATCAGGGAAGATTTCTAAAACTTTTTTCACTT
TTCTCGCATATCTAAGACAACTCTGGGTGATAAGTGTGGACTGGACGTTT
ATCTTTTCTCTTTTTTGTTCGCGCGCGCGTTCCGGGGATATTCGGGATGG
ATGTCCATTAAAATTAAATATATCCCTTTTTGTTACTTATTCCCTACTTG
AACAACCAATCCAGCACGATAACTACTAGATATCTGTGTCTGTGTCTGTG
CTGATTCCCCCCATCGATCTTCCGTCCGGCTCAACATGAAGACAAAGAC
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Coding sequence (CDS) from alignment at ch7:1215055..1216653+

>KJC3_009718-T1 ID=KJC3_009718-T1|Name=KJC3_009718-T1|organism=Aspergillus niger KJC3|type=CDS|length=1206bp|location=Sequence derived from alignment at ch7:1215055..1216653+ (Aspergillus niger KJC3)
ATGGCCGACGCTCCCGTTACCCTGCGGACTCGCAAGTTCATCCGCAACCC
CCTGCTTGCTCGCAAGCAGATGGTCGTGGATGTCCTCCACCCCAACCGCG
CCAACGTCTCCAAGGACGAGCTCCGCGACAAGCTCGCCGACCTGTACAAG
TCCAACAAGGACCAGGTCTCCGTCTTCGGTTTCCGTACGCAGTACGGTGG
TGGTAAGAGCACTGGCTTCGCTCTCATCTACGACTCCCAGGAGGCCCTGA
AGAAGTTCGAGCCCCTCTACCGTCTGGTCCGCATCGGTGCTGGCACAAAG
GTCGAGAAGCCCAGCAGACAGCAGCGCAAGCAACGGAAGAACCGCTCCAA
GAAGTTCCGCGGTACCGCCAAGACCAAGGGCCCCAAGAAGAACAAGGACT
AAATGGCCGACGCTCCCGTTACCCTGCGGACTCGCAAGTTCATCCGCAAC
CCCCTGCTTGCTCGCAAGCAGATGGTCGTGGATGTCCTCCACCCCAACCG
CGCCAACGTCTCCAAGGACGAGCTCCGCGACAAGCTCGCCGACCTGTACA
AGTCCAACAAGGACCAGGTCTCCGTCTTCGGTTTCCGTACGCAGTACGGT
GGTGGTAAGAGCACTGGCTTCGCTCTCATCTACGACTCCCAGGAGGCCCT
GAAGAAGTTCGAGCCCCTCTACCGTCTGGTCCGCATCGGTGCTGGCACAA
AGGTCGAGAAGCCCAGCAGACAGCAGCGCAAGCAACGGAAGAACCGCTCC
AAGAAGTTCCGCGGTACCGCCAAGACCAAGGGCCCCAAGAAGAACAAGGA
CTAAATGGCCGACGCTCCCGTTACCCTGCGGACTCGCAAGTTCATCCGCA
ACCCCCTGCTTGCTCGCAAGCAGATGGTCGTGGATGTCCTCCACCCCAAC
CGCGCCAACGTCTCCAAGGACGAGCTCCGCGACAAGCTCGCCGACCTGTA
CAAGTCCAACAAGGACCAGGTCTCCGTCTTCGGTTTCCGTACGCAGTACG
GTGGTGGTAAGAGCACTGGCTTCGCTCTCATCTACGACTCCCAGGAGGCC
CTGAAGAAGTTCGAGCCCCTCTACCGTCTGGTCCGCATCGGTGCTGGCAC
AAAGGTCGAGAAGCCCAGCAGACAGCAGCGCAAGCAACGGAAGAACCGCT
CCAAGAAGTTCCGCGGTACCGCCAAGACCAAGGGCCCCAAGAAGAACAAG
GACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009718KJC3_009718Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009718-T1KJC3_009718-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009718-T1.utr5p1KJC3_009718-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009718-T1.exon1KJC3_009718-T1.exon1Aspergillus niger KJC3exon
KJC3_009718-T1.exon2KJC3_009718-T1.exon2Aspergillus niger KJC3exon
KJC3_009718-T1.exon3KJC3_009718-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009718-T1.cdsKJC3_009718-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009718-T1.utr3p1KJC3_009718-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012678
DBxrefInterPro:IPR018098
DBxrefInterPro:IPR001976
DBxrefPFAM:PF01282
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1215055..1216653 +
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