You are here

Home

KJC3_009725-T1, KJC3_009725-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009725-T1
Unique NameKJC3_009725-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1234432..1237403+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009725-T1 ID=KJC3_009725-T1|Name=KJC3_009725-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2972bp|location=Sequence derived from alignment at ch7:1234432..1237403+ (Aspergillus niger KJC3)
CAACCAAAGAGCATCAGATCAGATCAGCCCACCTAAAGACAACAACATGC
ATACCCATAATATCTAGCAGAAGCAACAGCAACATCTGGAATCTAGAGTC
CACCTCGTGTCCGCAAACAATCTACTACCCCACACCACCACCACCACCCC
ACCATTTGACTACCTCATCGCAACTCCAAAAAAGAAAAAAATCTCAACCT
CACTCTTCACTACACAACCAAACAATGACCTCTACAACAACTACCAGCGG
AGAAGGAGAAAGAGGAGGAGGTTTCCTTCCCCCAACCCTCCCATCCCCAG
CCCCCTCCACCCCACGACCAAGCACGCCCTCCCTCCTCCCTAAACCCCGA
ACACATCCTCTCCGCGCGGGCTCCGCCAAAGAAGCAACGGTGATTAATCA
CATCGATACAACTCTACTGAGGATTTCGCGTCGGCATGCGAAGAAGTTCA
GCAGTGCTTACTATAAGCCTGACGATGAATCCAACTCCAATGCAAACTAT
TCTCCGGAATCATTCTCAGCCCGAGGTTATGGGAAGGGAGAAGAAGAAGG
GGAAGTACAAGGCTATGAAAGCTTCAAAGAAGTAGCTCGTGATTTGGAGG
GTTTGGTGGATGTGCTTTGGGTTAGTGGGACGCGTATGTATCCCCTCTCT
CTGTCATCCTTTTTTCTTTATGTTCTGAGCGAATGCTAATATGAACCTGG
AACAATAGCATCTCTCCAAATCCCCTACCTCATCTCCCTAGCCATCCAAG
TCAACTCCTACCTGCCCGAGTATCCCTTCTCGGCGGCGCCTACGTTCCGG
TTACTGCGGAAGTTGGATGAGGTGTTTGCGGAGCTTTTAGGTGGTGGTAA
CGAGGAAAGAAAGAGTGTGGTGTCTATGACGGAGAAGGTCCGGATCAAGA
GTATTGCGGAGTCGTGTCGGGTGTTGGTTGTTGAGACGAGAGAGAAGGAG
AATGAGGATGCTAACGGGGAGGATGACTATGATGAGGATGAGGATGAAGA
GTTTGAGGATGTCTATGGGAATGCAAATAAACTGGAGGATTATATGCCCA
TTCCTGGGAAGTGGGAGATGGAGACGGCGAAGGTTTATGAGAGGACGATT
CAGTTGTTGGGGGATGAGTTGGGTAATGTGGGTGAGTATTGTGATGAGGA
TTTGGCGGCCGGGGAGGAGGGGGCTTGTGATATGGGGGATTTTGTGGTTG
AGTTGGAGGATGAAGATGATGAGAGGTGATATCCTATCGTCTGTACCTTT
CGGGTTGGTTTGATGGTATATGGGATGTGGTGTGGTGCTGAGGCGAGAGT
GCTTTCTATGTGGTATAATGTCTGCGCAGTGAGTATCAGGGCGTCTATGG
CGTTGGTGGAGAATAAGGACACTTGGATTGTTGGTATTACATCTTGATAT
TAAGGGTGCATAACGAGGGCTTGGAGTCACACTTTGTTTGTGTTCTATCA
TTCGTTACAGTCTCTATCGCCGGGCTCAACCACTCCTCTCTAATTATTGT
ATTCTACTACAGCAATGCCACACGGCAACAGTAGTAGTCTAGACTTCAGT
GACTTTGTCCCGATTTCCGGCCCGACATGGACCATATTAATAATAATAAT
AAGCCCATGCTCCAGATGTTGCCGCATCCGCGTCCCTAACAACCGAAGCT
GACACGAACCAAGAAAGAGGCTGTGACCGCGTAGCCGTTCGGAGGGACCG
GGATCGATGTGAGTGGGGATGTGCTTGCTGAACTGGTGAGAGTTTCGGAC
AATCACCTACCCTACCTCAGCTGGGAGGAGTGGACATGAGTGGGTCGTTG
AGAGGTGATTCTTGGATGGTTCGTACGGACTTGTACTTGCGGACAAGTAG
AAGAGATCTTCAGTTACTCTGTAGTAGAGCGTTGAGGAATAATATACGTT
GCCCTATGAGACTTTCAGCTTCAGCTTAGTTTCACCCGATATGAAACAAC
AGCTAGGACCCTCCTTCCCTGGGACACTCTGGTGGTATTGAGATATCGAC
ATCCATGGTTCATCATGGAACCTCCATTTCAGCAACAAAAGATTACAATG
AAGGCCCTGTCCTGTATCAGGATTCCAGCCCAAGGTACTTATAGTAGGAA
TCCCTGGTTGAGGGTCCCCGGCCGAAAAGCAAGAAAGGGTTGGTGGAGGG
TGTGTATCGATAACGGCCAGGTGCAAGGAGAAGGAAGGCGGAAATCTGCA
AGGGACGGGCTGCTGAACAAGCAGCGGCATGATAGTGTAACCAACCCGAC
CCTACTTGCTTCTCATGTATGTTGCATATGTGGCATCTAAATGATACCTG
CATGGCAAATATGTGCTGATAATAAAGGAGGGTGAGCAAACAGTTCTTCT
GGTTGTGTAATTGATCATAATCACCATCGACCTGGTGTAGTTGGAAGTAA
GGGTGGCCCAAGCTAGGAAAGGACACACTAGGCAGCCTTATTCCTTGTAG
ATATTCCGTAGTTATTATTATGACCTTCAATTAGATCGATCTCTTCATCT
CCATCCCCCTCCCTTCCCAATCTTCCGGAATTTGCTCACGGTACACATGG
AATCAGGGGAAGAAAACCCATAGATAGCTCCCTTGCTCATGCCAATGACC
TTTCCATGGGATGATAGTGATGATGATGGTGATGATGATCGTTCTCCGGA
CGCATTCGAGCTAATTACCATCCTTTTCCCGGAGTTGATGACGCTCGTAT
TCTTGCCACCTGAAGTTGCGTTGACTGGTTCTTCCCAACACCCCAAGTAG
GTAAAGTTATTACCACACGGGATCCTGCAGTCAGTCAATCGGTCGGTCGC
GTCGCGTGCGCGTCGAGGCCAGCCAAGCTGAGAGTTAAACTAGAACAATT
ATACATACAGACACTAGAGTTTAGATCATAGAACATAGACATAATACCAC
CACCACATGCCCATTGTGAATTGAAACAGACTAGCTAGAATCTGGAACGA
TGGGAAAAACCATGAATCAGCC
back to top

Coding sequence (CDS) from alignment at ch7:1234432..1237403+

>KJC3_009725-T1 ID=KJC3_009725-T1|Name=KJC3_009725-T1|organism=Aspergillus niger KJC3|type=CDS|length=1860bp|location=Sequence derived from alignment at ch7:1234432..1237403+ (Aspergillus niger KJC3)
ATGACCTCTACAACAACTACCAGCGGAGAAGGAGAAAGAGGAGGAGGTTT
CCTTCCCCCAACCCTCCCATCCCCAGCCCCCTCCACCCCACGACCAAGCA
CGCCCTCCCTCCTCCCTAAACCCCGAACACATCCTCTCCGCGCGGGCTCC
GCCAAAGAAGCAACGGTGATTAATCACATCGATACAACTCTACTGAGGAT
TTCGCGTCGGCATGCGAAGAAGTTCAGCAGTGCTTACTATAAGCCTGACG
ATGAATCCAACTCCAATGCAAACTATTCTCCGGAATCATTCTCAGCCCGA
GGTTATGGGAAGGGAGAAGAAGAAGGGGAAGTACAAGGCTATGAAAGCTT
CAAAGAAGTAGCTCGTGATTTGGAGGGTTTGGTGGATGTGCTTTGGGTTA
GTGGGACGCCATCTCTCCAAATCCCCTACCTCATCTCCCTAGCCATCCAA
GTCAACTCCTACCTGCCCGAGTATCCCTTCTCGGCGGCGCCTACGTTCCG
GTTACTGCGGAAGTTGGATGAGGTGTTTGCGGAGCTTTTAGGTGGTGGTA
ACGAGGAAAGAAAGAGTGTGGTGTCTATGACGGAGAAGGTCCGGATCAAG
AGTATTGCGGAGTCGTGTCGGGTGTTGGTTGTTGAGACGAGAGAGAAGGA
GAATGAGGATGCTAACGGGGAGGATGACTATGATGAGGATGAGGATGAAG
AGTTTGAGGATGTCTATGGGAATGCAAATAAACTGGAGGATTATATGCCC
ATTCCTGGGAAGTGGGAGATGGAGACGGCGAAGGTTTATGAGAGGACGAT
TCAGTTGTTGGGGGATGAGTTGGGTAATGTGGGTGAGTATTGTGATGAGG
ATTTGGCGGCCGGGGAGGAGGGGGCTTGTGATATGGGGGATTTTGTGGTT
GAGTTGGAGGATGAAGATGATGAGAGGTGAATGACCTCTACAACAACTAC
CAGCGGAGAAGGAGAAAGAGGAGGAGGTTTCCTTCCCCCAACCCTCCCAT
CCCCAGCCCCCTCCACCCCACGACCAAGCACGCCCTCCCTCCTCCCTAAA
CCCCGAACACATCCTCTCCGCGCGGGCTCCGCCAAAGAAGCAACGGTGAT
TAATCACATCGATACAACTCTACTGAGGATTTCGCGTCGGCATGCGAAGA
AGTTCAGCAGTGCTTACTATAAGCCTGACGATGAATCCAACTCCAATGCA
AACTATTCTCCGGAATCATTCTCAGCCCGAGGTTATGGGAAGGGAGAAGA
AGAAGGGGAAGTACAAGGCTATGAAAGCTTCAAAGAAGTAGCTCGTGATT
TGGAGGGTTTGGTGGATGTGCTTTGGGTTAGTGGGACGCCATCTCTCCAA
ATCCCCTACCTCATCTCCCTAGCCATCCAAGTCAACTCCTACCTGCCCGA
GTATCCCTTCTCGGCGGCGCCTACGTTCCGGTTACTGCGGAAGTTGGATG
AGGTGTTTGCGGAGCTTTTAGGTGGTGGTAACGAGGAAAGAAAGAGTGTG
GTGTCTATGACGGAGAAGGTCCGGATCAAGAGTATTGCGGAGTCGTGTCG
GGTGTTGGTTGTTGAGACGAGAGAGAAGGAGAATGAGGATGCTAACGGGG
AGGATGACTATGATGAGGATGAGGATGAAGAGTTTGAGGATGTCTATGGG
AATGCAAATAAACTGGAGGATTATATGCCCATTCCTGGGAAGTGGGAGAT
GGAGACGGCGAAGGTTTATGAGAGGACGATTCAGTTGTTGGGGGATGAGT
TGGGTAATGTGGGTGAGTATTGTGATGAGGATTTGGCGGCCGGGGAGGAG
GGGGCTTGTGATATGGGGGATTTTGTGGTTGAGTTGGAGGATGAAGATGA
TGAGAGGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009725KJC3_009725Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009725-T1.utr5p1KJC3_009725-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009725-T1.exon1KJC3_009725-T1.exon1Aspergillus niger KJC3exon
KJC3_009725-T1.exon2KJC3_009725-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009725-T1.cdsKJC3_009725-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009725-T1.utr3p1KJC3_009725-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009725-T1KJC3_009725-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR031349
DBxrefPFAM:PF17110
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1234432..1237403 +
Powered by Drupal