You are here

Home

KJC3_009726-T1, KJC3_009726-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009726-T1
Unique NameKJC3_009726-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1242393..1243835+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009726-T1 ID=KJC3_009726-T1|Name=KJC3_009726-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1443bp|location=Sequence derived from alignment at ch7:1242393..1243835+ (Aspergillus niger KJC3)
ATGTCTTTCCAGAACTTTGATTCTTTCCAAAACCAGCACCCTGCTGCTGA
CGCCGCCGCTGCCGCTCCTGGCGCTCCTGCTACCGCGGACACCGCCATGA
CCGGCCAGGCTGACCCTACCACTGCCCCCTTCCAGGGTCCTGCTCCCGGG
GAGCCCACTGCTGCCCCTGTTCCCCAGCAGGCTAACGAGGGAAAGACCAC
CCTCTGGTAAGCTTGCCCAATGCGGTATCTTCTTGTCCGCGCTGTTGCTG
ACTCGTTTTGCCTTTTAGGATGGGTGAGCTTGAGCCCTGGATCGATGAGA
ACTTCGTTCGCAACCTCTGGTTCCAGATGGGTGAGCAGGTCAACGTTAAG
ATGATCCGCGACAAGTTTTCTGGGTGAGTACATAATAACGCTGGATTTGG
TTTGAAGGCGATCCTAATGTTGGTAGTAGGAGCAACGCCGGTTACTGCTT
CGTCGACTTCGCGTCCCCTGCCGCTGCCGCCAAGGCTCTGTCCCTGAACG
GCACCCCCATGCCTAACACCAACCGTCTGTTCAAGCTCAACTGGGCTACC
GGTGGTGGTCTTGCCGACCGCAGGTAAGGAGAAGATGCCCCCACCCCCAA
CATCCTCAAACTACAAGCTAACATTCCATATAGCCGTGATGACCGTGGCC
CTGAGTACTCGATCTTCGTTGGTGACTTGGGCCCTGAGGTCAACGAGTAT
GTCCTCGTTTCTCTCTTCCAGAGCCGCTTCCCGTCCTGCAAGTCTGCCAA
GATCATGACCGACCCTATCAGCGGCATGTCTCGTGGCTACGGCTTCGTCC
GCTTCTCCGACGAGAACGACCAGCAGCGGGCTCTGAGCGAGATGCAGGGT
GTGTACTGTGGCAACCGTCCCATGCGCATCTCTACTGCTACTCCCAAGAA
CAAGGGCCCCAGCCTTGGTGCTGCCGGTGCCATGGGCATGCCCGGCCCCG
CGGGCATGTACCCTCCCATGGGCGCTCCCCCCATGGGCTTCTACGGTGCT
CCCCAGCCCATGAACCAGTTCACCGACCCCAACAACACCACCGTTTTCGT
TGGCGGTCTGTCTGGCTACGTTACTGAGGACGAGCTCCGCTCTTTCTTCC
AGGGCTTCGGTGAAATCACCTACGTCAAGATCCCCCCTGGAAAGGGCTGC
GGTTTCGTCCAGTTCGTCCAGCGCCATGCTGCTGAGATGGCCATCAACCA
GATGCAGGGATACCCCATTGGAAACTCCCGTGTGCGTCTGAGCTGGGGTC
GCTCTCAGAACAACTCTGGCCCTGCCGGCAGCCCCTACCGTCCTGCTCCC
CCTCCGCCTCCCATGTACCCCTCCATGGGCATGCCCCCCGCTCACGGATA
CGGCGGCTTCGCGCCTATGAAGGTCGGTTCCCCTTGAACTCTCCCTCCGA
GGCTGGTGGGGTTCAGAGCATGACTAACGCCCAGACTTAGTAA
back to top

Coding sequence (CDS) from alignment at ch7:1242393..1243835+

>KJC3_009726-T1 ID=KJC3_009726-T1|Name=KJC3_009726-T1|organism=Aspergillus niger KJC3|type=CDS|length=5985bp|location=Sequence derived from alignment at ch7:1242393..1243835+ (Aspergillus niger KJC3)
ATGTCTTTCCAGAACTTTGATTCTTTCCAAAACCAGCACCCTGCTGCTGA
CGCCGCCGCTGCCGCTCCTGGCGCTCCTGCTACCGCGGACACCGCCATGA
CCGGCCAGGCTGACCCTACCACTGCCCCCTTCCAGGGTCCTGCTCCCGGG
GAGCCCACTGCTGCCCCTGTTCCCCAGCAGGCTAACGAGGGAAAGACCAC
CCTCTGGATGGGTGAGCTTGAGCCCTGGATCGATGAGAACTTCGTTCGCA
ACCTCTGGTTCCAGATGGGTGAGCAGGTCAACGTTAAGATGATCCGCGAC
AAGTTTTCTGGGAGCAACGCCGGTTACTGCTTCGTCGACTTCGCGTCCCC
TGCCGCTGCCGCCAAGGCTCTGTCCCTGAACGGCACCCCCATGCCTAACA
CCAACCGTCTGTTCAAGCTCAACTGGGCTACCGGTGGTGGTCTTGCCGAC
CGCAGCCGTGATGACCGTGGCCCTGAGTACTCGATCTTCGTTGGTGACTT
GGGCCCTGAGGTCAACGAGTATGTCCTCGTTTCTCTCTTCCAGAGCCGCT
TCCCGTCCTGCAAGTCTGCCAAGATCATGACCGACCCTATCAGCGGCATG
TCTCGTGGCTACGGCTTCGTCCGCTTCTCCGACGAGAACGACCAGCAGCG
GGCTCTGAGCGAGATGCAGGGTGTGTACTGTGGCAACCGTCCCATGCGCA
TCTCTACTGCTACTCCCAAGAACAAGGGCCCCAGCCTTGGTGCTGCCGGT
GCCATGGGCATGCCCGGCCCCGCGGGCATGTACCCTCCCATGGGCGCTCC
CCCCATGGGCTTCTACGGTGCTCCCCAGCCCATGAACCAGTTCACCGACC
CCAACAACACCACCGTTTTCGTTGGCGGTCTGTCTGGCTACGTTACTGAG
GACGAGCTCCGCTCTTTCTTCCAGGGCTTCGGTGAAATCACCTACGTCAA
GATCCCCCCTGGAAAGGGCTGCGGTTTCGTCCAGTTCGTCCAGCGCCATG
CTGCTGAGATGGCCATCAACCAGATGCAGGGATACCCCATTGGAAACTCC
CGTGTGCGTCTGAGCTGGGGTCGCTCTCAGAACAACTCTGGCCCTGCCGG
CAGCCCCTACCGTCCTGCTCCCCCTCCGCCTCCCATGTACCCCTCCATGG
GCATGCCCCCCGCTCACGGATACGGCGGCTTCGCGCCTATGAAGTAAATG
TCTTTCCAGAACTTTGATTCTTTCCAAAACCAGCACCCTGCTGCTGACGC
CGCCGCTGCCGCTCCTGGCGCTCCTGCTACCGCGGACACCGCCATGACCG
GCCAGGCTGACCCTACCACTGCCCCCTTCCAGGGTCCTGCTCCCGGGGAG
CCCACTGCTGCCCCTGTTCCCCAGCAGGCTAACGAGGGAAAGACCACCCT
CTGGATGGGTGAGCTTGAGCCCTGGATCGATGAGAACTTCGTTCGCAACC
TCTGGTTCCAGATGGGTGAGCAGGTCAACGTTAAGATGATCCGCGACAAG
TTTTCTGGGAGCAACGCCGGTTACTGCTTCGTCGACTTCGCGTCCCCTGC
CGCTGCCGCCAAGGCTCTGTCCCTGAACGGCACCCCCATGCCTAACACCA
ACCGTCTGTTCAAGCTCAACTGGGCTACCGGTGGTGGTCTTGCCGACCGC
AGCCGTGATGACCGTGGCCCTGAGTACTCGATCTTCGTTGGTGACTTGGG
CCCTGAGGTCAACGAGTATGTCCTCGTTTCTCTCTTCCAGAGCCGCTTCC
CGTCCTGCAAGTCTGCCAAGATCATGACCGACCCTATCAGCGGCATGTCT
CGTGGCTACGGCTTCGTCCGCTTCTCCGACGAGAACGACCAGCAGCGGGC
TCTGAGCGAGATGCAGGGTGTGTACTGTGGCAACCGTCCCATGCGCATCT
CTACTGCTACTCCCAAGAACAAGGGCCCCAGCCTTGGTGCTGCCGGTGCC
ATGGGCATGCCCGGCCCCGCGGGCATGTACCCTCCCATGGGCGCTCCCCC
CATGGGCTTCTACGGTGCTCCCCAGCCCATGAACCAGTTCACCGACCCCA
ACAACACCACCGTTTTCGTTGGCGGTCTGTCTGGCTACGTTACTGAGGAC
GAGCTCCGCTCTTTCTTCCAGGGCTTCGGTGAAATCACCTACGTCAAGAT
CCCCCCTGGAAAGGGCTGCGGTTTCGTCCAGTTCGTCCAGCGCCATGCTG
CTGAGATGGCCATCAACCAGATGCAGGGATACCCCATTGGAAACTCCCGT
GTGCGTCTGAGCTGGGGTCGCTCTCAGAACAACTCTGGCCCTGCCGGCAG
CCCCTACCGTCCTGCTCCCCCTCCGCCTCCCATGTACCCCTCCATGGGCA
TGCCCCCCGCTCACGGATACGGCGGCTTCGCGCCTATGAAGTAAATGTCT
TTCCAGAACTTTGATTCTTTCCAAAACCAGCACCCTGCTGCTGACGCCGC
CGCTGCCGCTCCTGGCGCTCCTGCTACCGCGGACACCGCCATGACCGGCC
AGGCTGACCCTACCACTGCCCCCTTCCAGGGTCCTGCTCCCGGGGAGCCC
ACTGCTGCCCCTGTTCCCCAGCAGGCTAACGAGGGAAAGACCACCCTCTG
GATGGGTGAGCTTGAGCCCTGGATCGATGAGAACTTCGTTCGCAACCTCT
GGTTCCAGATGGGTGAGCAGGTCAACGTTAAGATGATCCGCGACAAGTTT
TCTGGGAGCAACGCCGGTTACTGCTTCGTCGACTTCGCGTCCCCTGCCGC
TGCCGCCAAGGCTCTGTCCCTGAACGGCACCCCCATGCCTAACACCAACC
GTCTGTTCAAGCTCAACTGGGCTACCGGTGGTGGTCTTGCCGACCGCAGC
CGTGATGACCGTGGCCCTGAGTACTCGATCTTCGTTGGTGACTTGGGCCC
TGAGGTCAACGAGTATGTCCTCGTTTCTCTCTTCCAGAGCCGCTTCCCGT
CCTGCAAGTCTGCCAAGATCATGACCGACCCTATCAGCGGCATGTCTCGT
GGCTACGGCTTCGTCCGCTTCTCCGACGAGAACGACCAGCAGCGGGCTCT
GAGCGAGATGCAGGGTGTGTACTGTGGCAACCGTCCCATGCGCATCTCTA
CTGCTACTCCCAAGAACAAGGGCCCCAGCCTTGGTGCTGCCGGTGCCATG
GGCATGCCCGGCCCCGCGGGCATGTACCCTCCCATGGGCGCTCCCCCCAT
GGGCTTCTACGGTGCTCCCCAGCCCATGAACCAGTTCACCGACCCCAACA
ACACCACCGTTTTCGTTGGCGGTCTGTCTGGCTACGTTACTGAGGACGAG
CTCCGCTCTTTCTTCCAGGGCTTCGGTGAAATCACCTACGTCAAGATCCC
CCCTGGAAAGGGCTGCGGTTTCGTCCAGTTCGTCCAGCGCCATGCTGCTG
AGATGGCCATCAACCAGATGCAGGGATACCCCATTGGAAACTCCCGTGTG
CGTCTGAGCTGGGGTCGCTCTCAGAACAACTCTGGCCCTGCCGGCAGCCC
CTACCGTCCTGCTCCCCCTCCGCCTCCCATGTACCCCTCCATGGGCATGC
CCCCCGCTCACGGATACGGCGGCTTCGCGCCTATGAAGTAAATGTCTTTC
CAGAACTTTGATTCTTTCCAAAACCAGCACCCTGCTGCTGACGCCGCCGC
TGCCGCTCCTGGCGCTCCTGCTACCGCGGACACCGCCATGACCGGCCAGG
CTGACCCTACCACTGCCCCCTTCCAGGGTCCTGCTCCCGGGGAGCCCACT
GCTGCCCCTGTTCCCCAGCAGGCTAACGAGGGAAAGACCACCCTCTGGAT
GGGTGAGCTTGAGCCCTGGATCGATGAGAACTTCGTTCGCAACCTCTGGT
TCCAGATGGGTGAGCAGGTCAACGTTAAGATGATCCGCGACAAGTTTTCT
GGGAGCAACGCCGGTTACTGCTTCGTCGACTTCGCGTCCCCTGCCGCTGC
CGCCAAGGCTCTGTCCCTGAACGGCACCCCCATGCCTAACACCAACCGTC
TGTTCAAGCTCAACTGGGCTACCGGTGGTGGTCTTGCCGACCGCAGCCGT
GATGACCGTGGCCCTGAGTACTCGATCTTCGTTGGTGACTTGGGCCCTGA
GGTCAACGAGTATGTCCTCGTTTCTCTCTTCCAGAGCCGCTTCCCGTCCT
GCAAGTCTGCCAAGATCATGACCGACCCTATCAGCGGCATGTCTCGTGGC
TACGGCTTCGTCCGCTTCTCCGACGAGAACGACCAGCAGCGGGCTCTGAG
CGAGATGCAGGGTGTGTACTGTGGCAACCGTCCCATGCGCATCTCTACTG
CTACTCCCAAGAACAAGGGCCCCAGCCTTGGTGCTGCCGGTGCCATGGGC
ATGCCCGGCCCCGCGGGCATGTACCCTCCCATGGGCGCTCCCCCCATGGG
CTTCTACGGTGCTCCCCAGCCCATGAACCAGTTCACCGACCCCAACAACA
CCACCGTTTTCGTTGGCGGTCTGTCTGGCTACGTTACTGAGGACGAGCTC
CGCTCTTTCTTCCAGGGCTTCGGTGAAATCACCTACGTCAAGATCCCCCC
TGGAAAGGGCTGCGGTTTCGTCCAGTTCGTCCAGCGCCATGCTGCTGAGA
TGGCCATCAACCAGATGCAGGGATACCCCATTGGAAACTCCCGTGTGCGT
CTGAGCTGGGGTCGCTCTCAGAACAACTCTGGCCCTGCCGGCAGCCCCTA
CCGTCCTGCTCCCCCTCCGCCTCCCATGTACCCCTCCATGGGCATGCCCC
CCGCTCACGGATACGGCGGCTTCGCGCCTATGAAGTAAATGTCTTTCCAG
AACTTTGATTCTTTCCAAAACCAGCACCCTGCTGCTGACGCCGCCGCTGC
CGCTCCTGGCGCTCCTGCTACCGCGGACACCGCCATGACCGGCCAGGCTG
ACCCTACCACTGCCCCCTTCCAGGGTCCTGCTCCCGGGGAGCCCACTGCT
GCCCCTGTTCCCCAGCAGGCTAACGAGGGAAAGACCACCCTCTGGATGGG
TGAGCTTGAGCCCTGGATCGATGAGAACTTCGTTCGCAACCTCTGGTTCC
AGATGGGTGAGCAGGTCAACGTTAAGATGATCCGCGACAAGTTTTCTGGG
AGCAACGCCGGTTACTGCTTCGTCGACTTCGCGTCCCCTGCCGCTGCCGC
CAAGGCTCTGTCCCTGAACGGCACCCCCATGCCTAACACCAACCGTCTGT
TCAAGCTCAACTGGGCTACCGGTGGTGGTCTTGCCGACCGCAGCCGTGAT
GACCGTGGCCCTGAGTACTCGATCTTCGTTGGTGACTTGGGCCCTGAGGT
CAACGAGTATGTCCTCGTTTCTCTCTTCCAGAGCCGCTTCCCGTCCTGCA
AGTCTGCCAAGATCATGACCGACCCTATCAGCGGCATGTCTCGTGGCTAC
GGCTTCGTCCGCTTCTCCGACGAGAACGACCAGCAGCGGGCTCTGAGCGA
GATGCAGGGTGTGTACTGTGGCAACCGTCCCATGCGCATCTCTACTGCTA
CTCCCAAGAACAAGGGCCCCAGCCTTGGTGCTGCCGGTGCCATGGGCATG
CCCGGCCCCGCGGGCATGTACCCTCCCATGGGCGCTCCCCCCATGGGCTT
CTACGGTGCTCCCCAGCCCATGAACCAGTTCACCGACCCCAACAACACCA
CCGTTTTCGTTGGCGGTCTGTCTGGCTACGTTACTGAGGACGAGCTCCGC
TCTTTCTTCCAGGGCTTCGGTGAAATCACCTACGTCAAGATCCCCCCTGG
AAAGGGCTGCGGTTTCGTCCAGTTCGTCCAGCGCCATGCTGCTGAGATGG
CCATCAACCAGATGCAGGGATACCCCATTGGAAACTCCCGTGTGCGTCTG
AGCTGGGGTCGCTCTCAGAACAACTCTGGCCCTGCCGGCAGCCCCTACCG
TCCTGCTCCCCCTCCGCCTCCCATGTACCCCTCCATGGGCATGCCCCCCG
CTCACGGATACGGCGGCTTCGCGCCTATGAAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009726KJC3_009726Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009726-T1KJC3_009726-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009726-T1.exon1KJC3_009726-T1.exon1Aspergillus niger KJC3exon
KJC3_009726-T1.exon2KJC3_009726-T1.exon2Aspergillus niger KJC3exon
KJC3_009726-T1.exon3KJC3_009726-T1.exon3Aspergillus niger KJC3exon
KJC3_009726-T1.exon4KJC3_009726-T1.exon4Aspergillus niger KJC3exon
KJC3_009726-T1.exon5KJC3_009726-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009726-T1.cdsKJC3_009726-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1242393..1243835 +
Powered by Drupal