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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1256949..1259192+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009730-T1 ID=KJC3_009730-T1|Name=KJC3_009730-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2244bp|location=Sequence derived from alignment at ch7:1256949..1259192+ (Aspergillus niger KJC3)
GATTTCCCCAGCTACTAGGCTTGATTGCATTCTACGCTCAGCCCCCATCC
CTACTTAGACTCGCATACCCATTGCTCGAGCCCGCCCGCTGGATTAATTT
TCAATAATGTCGGGGGAAAAGCGACCTGCGCAAGAAGCCTTTGGCTCATC
GAACCAGCTTGTCGTCAAGCGAAAGAAGTCCGACGCCGGTCTCAATGATA
GCACAGCCATCGTCCAAAGCTCGTCCCAAAATGGAGCTTTGATCCAATCA
GTATGCCTTATCCCGTATTATTCGAAAAGTGAGATTTTTGGTCAGGTTCC
ATTGTTGACCATGACTATAGGTTCCCCGCACCAGCGGGCTTCAAGCACCG
ATTATGGAAATGAATGGTGAGCTGCACCACTGCGGTGACTTGCAACTTAG
GCTGACATATAATGGATAATACTAGGTCATTCTGGTGAAGTTTTTGCGGT
GCGGTTTGATCCGACTGCTCAGCACATTGCTTCAGGCTCCATGGATCGAT
CTATCTGTACGTGTTTCCTTTTATATAATAGTGTCTAGAGGGTGCAGGCT
AATCACACCGTCTACAACAGTGCTTTGGAACACATATGGACAGTGCGAGA
ACTATGGTGCGCTATCAGGTCACCGAGGAGCAGTTCTTGACCTTCAATGG
TCGCGCGACTCCAGAACGTTATTTTCCGCATCGGCCGACATGACACTCGC
TAGCTGGGATCTCGAAACCGGACAAAGAATACGCCGGCACATTGGGCACG
AGGAGATTATCAATTGTCTAGACATAAGCAAAAGAGGCCAGGAATTGCTG
GTTAGCGCAAGTGACGACGGCTGCATAGGCATCTGGGATCCCCGGCAAAA
GGATGCTATCGAATATTTGGAAACCGAGTTGCCCATCACGGCAGTGGCGC
TTTCGGAGGCAGGTAACGAGATCTACAGTGGTGGTATCGATAACACTATC
CATGCTTGGGATCTACGGAAGAAGAGCATCGTCTACTCCATGGCTGGACA
CACGGAAACCATCACCTCTCTCGAAATTTCGCCGGACTCGCAAACTCTTC
TTTCCAACTCACACGACTCGACCGTACGCACGTGGGATATCCGGCCGTTC
GCGCCGGCAAATCGACACGTCAGGACGTTTGACGGTGCGCCGGTCGGTTT
GGAGAAGAACCTCATCCGGGCCAGTTGGGACCCGAGTGGGGAGAAGATTG
CGGCGGGTAGTGGTGACAGGAGTGTTGTGGTCTGGAACTCGAAGTCCGGC
AAAATCCTATACAAGCTCCCTGGACATAAGGGGACCGTCAATGACGTCCG
GTTTTCACCGAACAATGAGCCCATCAGTAAGTTACACCGGGTTTTGGAAT
ATTCGTTGGAAATACTAATATCCGTCTACAGTCGTCTCGGGATCGTCCGA
TAGAACGCTCATGCTCGGTGAACTTGGCAAGTGAGGGGAAGCGCATGTGC
AACACACTCAGCCAACACAACCGCGAGTTGATTCGTCTTCCTACGGACAG
CATTTATCTATGACAACAGGTTCCGAGCCCGGGCTTCCGTCAAGCTTAGT
TGGACTTGTGGCGAATGGCGATGGCACGAGAATCTTCAGCTCCAATCTTG
CTTGCCGGTTGGAATGTGTCAACCAAGGCTGGTAAATAGCCATTATGGGC
AGACCGGGAAGAACGGGCCGGCCGGATGACGGGAGAAGGGTTACTACCAT
TATTTGAATACCTCCCGTGAGCGCAGTATATCCTCATCTTTTATGCCTCG
CAAGTGTAATAATATACGTCAGTATGATAATGGCTCGCACTTCATTTGTG
TAACCTTGGAAGATCATAGCGAAAAGCGATCGGGGCTACTGGCCAACTAC
ATCTCAGTAAGCTGGGGTAGGCGCTCCCGTTAGAAAATTACCAGCGCATC
GTGGGTTAATTGGCGTTCGATTGGCCCCCTTTGGAAGAGGGTCCCTAAGA
GGGGATCTGGCTGCGAGGCCGAAACAGTTGGCTTCCTTCAGGCGCGAGGA
GCCACAACCATCCTTAATATTAGTTTTAGTGTTAACATAATCTTTACCCG
CATCCCAGCATCGGCCCGCCAGGACAGTAAGGTAGAGAGAGTATAGACTG
AATGATGATGCCAAGGGAAAATGTGCCTAAGAGCACAGATGTAATTGCAG
ATGCACAGGTCTGTTAAACCAGACTAGTTCCATTCTTAGATGAAGACAGC
TATAGCGTAAGATCAAAAGCTATGCAGCTGCGGGTTGTTATCGG back to topCoding sequence (CDS) from alignment at ch7:1256949..1259192+ >KJC3_009730-T1 ID=KJC3_009730-T1|Name=KJC3_009730-T1|organism=Aspergillus niger KJC3|type=CDS|length=5400bp|location=Sequence derived from alignment at ch7:1256949..1259192+ (Aspergillus niger KJC3)
ATGTCGGGGGAAAAGCGACCTGCGCAAGAAGCCTTTGGCTCATCGAACCA
GCTTGTCGTCAAGCGAAAGAAGTCCGACGCCGGTCTCAATGATAGCACAG
CCATCGTCCAAAGCTCGTCCCAAAATGGAGCTTTGATCCAATCAGTTCCC
CGCACCAGCGGGCTTCAAGCACCGATTATGGAAATGAATGGTCATTCTGG
TGAAGTTTTTGCGGTGCGGTTTGATCCGACTGCTCAGCACATTGCTTCAG
GCTCCATGGATCGATCTATCTTGCTTTGGAACACATATGGACAGTGCGAG
AACTATGGTGCGCTATCAGGTCACCGAGGAGCAGTTCTTGACCTTCAATG
GTCGCGCGACTCCAGAACGTTATTTTCCGCATCGGCCGACATGACACTCG
CTAGCTGGGATCTCGAAACCGGACAAAGAATACGCCGGCACATTGGGCAC
GAGGAGATTATCAATTGTCTAGACATAAGCAAAAGAGGCCAGGAATTGCT
GGTTAGCGCAAGTGACGACGGCTGCATAGGCATCTGGGATCCCCGGCAAA
AGGATGCTATCGAATATTTGGAAACCGAGTTGCCCATCACGGCAGTGGCG
CTTTCGGAGGCAGGTAACGAGATCTACAGTGGTGGTATCGATAACACTAT
CCATGCTTGGGATCTACGGAAGAAGAGCATCGTCTACTCCATGGCTGGAC
ACACGGAAACCATCACCTCTCTCGAAATTTCGCCGGACTCGCAAACTCTT
CTTTCCAACTCACACGACTCGACCGTACGCACGTGGGATATCCGGCCGTT
CGCGCCGGCAAATCGACACGTCAGGACGTTTGACGGTGCGCCGGTCGGTT
TGGAGAAGAACCTCATCCGGGCCAGTTGGGACCCGAGTGGGGAGAAGATT
GCGGCGGGTAGTGGTGACAGGAGTGTTGTGGTCTGGAACTCGAAGTCCGG
CAAAATCCTATACAAGCTCCCTGGACATAAGGGGACCGTCAATGACGTCC
GGTTTTCACCGAACAATGAGCCCATCATCGTCTCGGGATCGTCCGATAGA
ACGCTCATGCTCGGTGAACTTGGCAAGTGAATGTCGGGGGAAAAGCGACC
TGCGCAAGAAGCCTTTGGCTCATCGAACCAGCTTGTCGTCAAGCGAAAGA
AGTCCGACGCCGGTCTCAATGATAGCACAGCCATCGTCCAAAGCTCGTCC
CAAAATGGAGCTTTGATCCAATCAGTTCCCCGCACCAGCGGGCTTCAAGC
ACCGATTATGGAAATGAATGGTCATTCTGGTGAAGTTTTTGCGGTGCGGT
TTGATCCGACTGCTCAGCACATTGCTTCAGGCTCCATGGATCGATCTATC
TTGCTTTGGAACACATATGGACAGTGCGAGAACTATGGTGCGCTATCAGG
TCACCGAGGAGCAGTTCTTGACCTTCAATGGTCGCGCGACTCCAGAACGT
TATTTTCCGCATCGGCCGACATGACACTCGCTAGCTGGGATCTCGAAACC
GGACAAAGAATACGCCGGCACATTGGGCACGAGGAGATTATCAATTGTCT
AGACATAAGCAAAAGAGGCCAGGAATTGCTGGTTAGCGCAAGTGACGACG
GCTGCATAGGCATCTGGGATCCCCGGCAAAAGGATGCTATCGAATATTTG
GAAACCGAGTTGCCCATCACGGCAGTGGCGCTTTCGGAGGCAGGTAACGA
GATCTACAGTGGTGGTATCGATAACACTATCCATGCTTGGGATCTACGGA
AGAAGAGCATCGTCTACTCCATGGCTGGACACACGGAAACCATCACCTCT
CTCGAAATTTCGCCGGACTCGCAAACTCTTCTTTCCAACTCACACGACTC
GACCGTACGCACGTGGGATATCCGGCCGTTCGCGCCGGCAAATCGACACG
TCAGGACGTTTGACGGTGCGCCGGTCGGTTTGGAGAAGAACCTCATCCGG
GCCAGTTGGGACCCGAGTGGGGAGAAGATTGCGGCGGGTAGTGGTGACAG
GAGTGTTGTGGTCTGGAACTCGAAGTCCGGCAAAATCCTATACAAGCTCC
CTGGACATAAGGGGACCGTCAATGACGTCCGGTTTTCACCGAACAATGAG
CCCATCATCGTCTCGGGATCGTCCGATAGAACGCTCATGCTCGGTGAACT
TGGCAAGTGAATGTCGGGGGAAAAGCGACCTGCGCAAGAAGCCTTTGGCT
CATCGAACCAGCTTGTCGTCAAGCGAAAGAAGTCCGACGCCGGTCTCAAT
GATAGCACAGCCATCGTCCAAAGCTCGTCCCAAAATGGAGCTTTGATCCA
ATCAGTTCCCCGCACCAGCGGGCTTCAAGCACCGATTATGGAAATGAATG
GTCATTCTGGTGAAGTTTTTGCGGTGCGGTTTGATCCGACTGCTCAGCAC
ATTGCTTCAGGCTCCATGGATCGATCTATCTTGCTTTGGAACACATATGG
ACAGTGCGAGAACTATGGTGCGCTATCAGGTCACCGAGGAGCAGTTCTTG
ACCTTCAATGGTCGCGCGACTCCAGAACGTTATTTTCCGCATCGGCCGAC
ATGACACTCGCTAGCTGGGATCTCGAAACCGGACAAAGAATACGCCGGCA
CATTGGGCACGAGGAGATTATCAATTGTCTAGACATAAGCAAAAGAGGCC
AGGAATTGCTGGTTAGCGCAAGTGACGACGGCTGCATAGGCATCTGGGAT
CCCCGGCAAAAGGATGCTATCGAATATTTGGAAACCGAGTTGCCCATCAC
GGCAGTGGCGCTTTCGGAGGCAGGTAACGAGATCTACAGTGGTGGTATCG
ATAACACTATCCATGCTTGGGATCTACGGAAGAAGAGCATCGTCTACTCC
ATGGCTGGACACACGGAAACCATCACCTCTCTCGAAATTTCGCCGGACTC
GCAAACTCTTCTTTCCAACTCACACGACTCGACCGTACGCACGTGGGATA
TCCGGCCGTTCGCGCCGGCAAATCGACACGTCAGGACGTTTGACGGTGCG
CCGGTCGGTTTGGAGAAGAACCTCATCCGGGCCAGTTGGGACCCGAGTGG
GGAGAAGATTGCGGCGGGTAGTGGTGACAGGAGTGTTGTGGTCTGGAACT
CGAAGTCCGGCAAAATCCTATACAAGCTCCCTGGACATAAGGGGACCGTC
AATGACGTCCGGTTTTCACCGAACAATGAGCCCATCATCGTCTCGGGATC
GTCCGATAGAACGCTCATGCTCGGTGAACTTGGCAAGTGAATGTCGGGGG
AAAAGCGACCTGCGCAAGAAGCCTTTGGCTCATCGAACCAGCTTGTCGTC
AAGCGAAAGAAGTCCGACGCCGGTCTCAATGATAGCACAGCCATCGTCCA
AAGCTCGTCCCAAAATGGAGCTTTGATCCAATCAGTTCCCCGCACCAGCG
GGCTTCAAGCACCGATTATGGAAATGAATGGTCATTCTGGTGAAGTTTTT
GCGGTGCGGTTTGATCCGACTGCTCAGCACATTGCTTCAGGCTCCATGGA
TCGATCTATCTTGCTTTGGAACACATATGGACAGTGCGAGAACTATGGTG
CGCTATCAGGTCACCGAGGAGCAGTTCTTGACCTTCAATGGTCGCGCGAC
TCCAGAACGTTATTTTCCGCATCGGCCGACATGACACTCGCTAGCTGGGA
TCTCGAAACCGGACAAAGAATACGCCGGCACATTGGGCACGAGGAGATTA
TCAATTGTCTAGACATAAGCAAAAGAGGCCAGGAATTGCTGGTTAGCGCA
AGTGACGACGGCTGCATAGGCATCTGGGATCCCCGGCAAAAGGATGCTAT
CGAATATTTGGAAACCGAGTTGCCCATCACGGCAGTGGCGCTTTCGGAGG
CAGGTAACGAGATCTACAGTGGTGGTATCGATAACACTATCCATGCTTGG
GATCTACGGAAGAAGAGCATCGTCTACTCCATGGCTGGACACACGGAAAC
CATCACCTCTCTCGAAATTTCGCCGGACTCGCAAACTCTTCTTTCCAACT
CACACGACTCGACCGTACGCACGTGGGATATCCGGCCGTTCGCGCCGGCA
AATCGACACGTCAGGACGTTTGACGGTGCGCCGGTCGGTTTGGAGAAGAA
CCTCATCCGGGCCAGTTGGGACCCGAGTGGGGAGAAGATTGCGGCGGGTA
GTGGTGACAGGAGTGTTGTGGTCTGGAACTCGAAGTCCGGCAAAATCCTA
TACAAGCTCCCTGGACATAAGGGGACCGTCAATGACGTCCGGTTTTCACC
GAACAATGAGCCCATCATCGTCTCGGGATCGTCCGATAGAACGCTCATGC
TCGGTGAACTTGGCAAGTGAATGTCGGGGGAAAAGCGACCTGCGCAAGAA
GCCTTTGGCTCATCGAACCAGCTTGTCGTCAAGCGAAAGAAGTCCGACGC
CGGTCTCAATGATAGCACAGCCATCGTCCAAAGCTCGTCCCAAAATGGAG
CTTTGATCCAATCAGTTCCCCGCACCAGCGGGCTTCAAGCACCGATTATG
GAAATGAATGGTCATTCTGGTGAAGTTTTTGCGGTGCGGTTTGATCCGAC
TGCTCAGCACATTGCTTCAGGCTCCATGGATCGATCTATCTTGCTTTGGA
ACACATATGGACAGTGCGAGAACTATGGTGCGCTATCAGGTCACCGAGGA
GCAGTTCTTGACCTTCAATGGTCGCGCGACTCCAGAACGTTATTTTCCGC
ATCGGCCGACATGACACTCGCTAGCTGGGATCTCGAAACCGGACAAAGAA
TACGCCGGCACATTGGGCACGAGGAGATTATCAATTGTCTAGACATAAGC
AAAAGAGGCCAGGAATTGCTGGTTAGCGCAAGTGACGACGGCTGCATAGG
CATCTGGGATCCCCGGCAAAAGGATGCTATCGAATATTTGGAAACCGAGT
TGCCCATCACGGCAGTGGCGCTTTCGGAGGCAGGTAACGAGATCTACAGT
GGTGGTATCGATAACACTATCCATGCTTGGGATCTACGGAAGAAGAGCAT
CGTCTACTCCATGGCTGGACACACGGAAACCATCACCTCTCTCGAAATTT
CGCCGGACTCGCAAACTCTTCTTTCCAACTCACACGACTCGACCGTACGC
ACGTGGGATATCCGGCCGTTCGCGCCGGCAAATCGACACGTCAGGACGTT
TGACGGTGCGCCGGTCGGTTTGGAGAAGAACCTCATCCGGGCCAGTTGGG
ACCCGAGTGGGGAGAAGATTGCGGCGGGTAGTGGTGACAGGAGTGTTGTG
GTCTGGAACTCGAAGTCCGGCAAAATCCTATACAAGCTCCCTGGACATAA
GGGGACCGTCAATGACGTCCGGTTTTCACCGAACAATGAGCCCATCATCG
TCTCGGGATCGTCCGATAGAACGCTCATGCTCGGTGAACTTGGCAAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009730-T1.utr5p1 | KJC3_009730-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1256949..1259192 + |
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